Etheostoma spectabile (orangethroat darter): 116694565
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Entry
116694565 CDS
T08457
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116694565
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116694565
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
U-box type E3
116694565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
SR-25
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116694565
NCBI-ProteinID:
XP_032380233
LinkDB
All DBs
Position
2:6624136..6641165
Genome browser
AA seq
1759 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLNELKRQIMARERLKATDCDLQITNAQTREEYTDD
EAHIPKHSSVIVRRTPLGGVKPAGRTFIVDRSDTAVVGSSRPTDSSPSMSLAQLAKTANL
VDANASEEDKIKAMMSQSNHEYDPIHYSKKAVGPPPAHYTCFRCGKAGHYIRQCPLLMVQ
DKSVEGPKPVRISKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYAQGKKERPPFV
PHDQSSSEDDTDPIPDELLCPICNDLMTDAVVIPCCGNSYCDDCIRTTLLDSEEHICFTC
KQSDVSPDNLIANKFLRQAVNNFKNETGYTKHVRKQVQNTAPPPPRPQLVRPLHSRQQDP
LLANVTHPPPPSAPSPAPQAQVPAPAPIPAPAPIPAPAPPQAPAAPSASTPPHAATVEEQ
DDSPAPALVVDPHSPMHSNSHGEPPPPGETDPEPTVTPDSSGTSESGLPNYHLTVIGHPP
PIRPPHPPGHQSRPPPSHRGGGRLWDRFYRGREEHPSTHLQRAPPPAPGPQVYPAPSMYP
PPPQSYPPPYTSGPGLMPPVMGYQPQPVYAPGPPGLNPPWVAPGTQPPLVPLPPLAQPPL
SKEDFYRQRHHRQDKVTSKLDEFTKDFHKELMKYRNAPKRRRPSYSRSRSYSRSPFSRSP
YSRSRSRSRSRSYSYSPSRSRSRSRSHGRFYPRSPYSRRNGRSYGRSRTRSRSRSRSYGY
RRSGTPRSPPPYRPGGWEGAEGVGPYRSRSRSPGPGGFRTRSPGGRKPPPRELPPYELKG
SSPGGNERWERDRYRQWEKEYADWYNKYYKDYDNQHPHPHPPLHHRGHGSRDRERDRMSP
LPRDYSPQGRGRRGREERGAPPHHPPSSSSGTKSSTKVLKTKKVKKKRSGEESESSHQSV
DRGDATPVRDEPMDEIPSLVTTPPMSSKSSLGATTTTKAPASKSTAAPVKTSTKSTSKTP
SDKTKKERSQKVKARVKTEAVKVKTDRVKKKTGDGVVTKKKDSSSSSSSSATKPLKTIKS
KPEDAPISTTPKKERGKSSAVRPPLLKTPPLSSQNLSLHHASLHDGPRPGHDMRGRRDLP
QGCGLLPHPHQHTILHRPPSPDSRRRMGEDGRSLLRPPPGKLRRIDGLGGGGDLISHSHM
SHQPPLHRLPPPSDRPGLLPLPGSREMGRGDADRGSIRPLMDLQVNPLAQRRIKLNRDLG
RKSSTEMAASDRAPSGPEKTTSTSDRSAAANICEGDRPGSAAEGAGRKERAASADRGVPR
ERPGSAGERLQGSDREQSRSSGLDKEQDRTSGSDRDRGSASDRQRDRVSGSQKIAVAVER
DPEGERSVRRERKNSSGGSAGGRSVCLDKMTIAEKTAISRSVTDPQEKPSTSSKEKGEVS
ERSSKSDRSVSKDRTERSVPSGEKPLAAHREAVKDGEESVVKSKPRISRKALTSLAVSST
STRSTQETKRESDKDQKSVSSKPAEQPPSSPGHSRGRSPSISPTPSPAREEPLIQPPPRS
KWEREDDEEGQENGLGAPKDPSPVPQRGRGREGQTEAPKPARGEGRDATREERRGVLREE
KKGKAPREESKGGRTAQTNSDKPTKSKLVREEGRGGGGAAGGGGGGGRDEGRGVTGKEER
GAEGRGGGGREESRGPEPRRQRLCSDLGRETDEAAFVPDYSEGEGSEPDRGRSGSPSPSQ
SQPSSPSQSNHSGVADKKKKKHKKHKKHKKHKKHSTHEKEGEQKDHKHKHKKKKHKKSKD
KDVPVEEETTEKAVEGAPC
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcactataagttttcttccaaactggactacaacacagttactttcgat
gggctgcatatcaccctcaacgagcttaaaaggcagattatggcccgagagcgcctcaag
gccacagattgcgacctgcagatcaccaatgcgcagactcgagaagaatacacagacgat
gaggcccacatccctaaacactcgtccgtgatcgtccgccgtactccacttggaggagta
aaacctgctggcaggacgttcattgtagatcgttctgacacagctgtggtgggatcttct
agacccactgactcttctccatctatgtccctcgcccagctcgccaagactgctaacctg
gttgacgcgaatgcatcagaggaggacaagattaaagccatgatgtcacagtccaatcat
gaatatgacccgatacattactccaagaaagcagtgggacctccacctgctcactatacc
tgctttcgctgtggaaaagctggtcactacattcggcaatgccccttactaatggtccag
gataagagtgtagagggtcccaagccagtgaggattagtaagggcattcctcagagcttc
atggttaaagcagagcccggcaccaagggagccatgttaaccagcactggagaatacgct
atacctgcaatagatgcggaggcatatgcacaaggaaagaaggagcgccctccgtttgtt
ccacatgaccagtcatcatctgaggatgatacagacccaatccctgatgaactcttgtgt
ccgatctgcaacgacctgatgacagatgctgtagttataccctgctgtggaaacagttac
tgcgatgactgtatcaggactaccttgttggactcagaggagcacatctgcttcacatgc
aaacagtcagatgtttcacctgataatctcattgccaacaagtttcttcgacaggctgtg
aacaactttaagaatgagacaggatacaccaaacatgtgcgcaagcaggtccaaaataca
gccccgcctccaccgcgccctcagttggtcaggccactgcactcaagacagcaggaccca
ctgttggccaacgtcacccaccctcctcctccaagcgcaccctctcctgcccctcaagca
caggtccctgcccctgccccaattcctgcccctgcccctattcctgcccctgctcctccg
caagctcctgcagctccttctgcttctacccctcctcatgctgctactgttgaagaacaa
gatgattcaccagcccctgcacttgttgttgacccccattctcctatgcactctaacagc
cacggagaaccacccccaccgggtgagactgatccagaacctactgtgacaccagactca
tcaggaacctcagaaagtggattaccgaactaccatttaactgttattggccacccgcca
cctataaggccgcctcatccaccaggtcaccagtcacggccaccgccctctcacagaggt
ggaggcagactctgggacaggttttacagaggtagagaagagcacccctccactcacctt
cagagagctccacctcctgcacctggccctcaagtgtacccggcgccgtccatgtacccg
cccccaccacagtcctaccctcctccgtacacctctggccctggacttatgcctcctgtc
atgggttaccaacctcagccggtttatgcccctggtccaccggggctcaaccctccctgg
gttgcccctggtacccagccccctcttgtccctctacccccccttgctcagccccccctt
tctaaggaagatttctacagacagcggcaccaccgacaggacaaagttacatctaaactg
gacgaatttactaaagacttccacaaagagcttatgaagtacagaaatgcaccaaagaga
cgaagaccgtcatattcaagatcccggtcatacagtcgctctccattcagccgctctcct
tactcgcgctctagatccagatcaagatccaggtcttactcttattctcccagtcgatct
cgctcccgatcacgctcccatggccgattttatccccgctccccttattccagacgtaac
ggacgcagttatggccgctcccggacaaggtcccgctctcgttcaaggtcttatggatat
cggcgttctggcactccacggtctcctcccccctaccggccaggaggctgggagggagca
gaaggcgtgggaccctacaggtcccggtctcgctcccctggccctggtggcttccggacc
cgcagccctggtggacgaaagccgcctccacgtgaactcccaccgtatgaactgaagggt
tcaagtcctggaggcaacgagcgctgggaaagagacagatatcggcagtgggagaaggag
tatgcagactggtacaacaagtactacaaagactatgacaaccaacatccgcatccccat
cccccacttcatcacagaggtcacggcagcagagacagggagagggacagaatgtcccca
ttaccaagagattactctccccaggggagagggagaagagggagagaggagcgaggtgct
ccccctcaccatcctccgtcctcttcatcagggaccaaatccagcactaaagtcctcaag
acaaagaaagtaaaaaagaagaggtctggggaggaatcagagtcatcgcatcagtcggta
gacagaggtgatgctactcctgtcagagacgaaccaatggacgaaatcccttcacttgtt
acaactcctcccatgtcctcaaagtcttcgcttggagccaccaccaccaccaaggcacca
gcctctaaaagcactgctgcgcccgttaaaacctcaactaagtcaacatcgaagactccg
tctgataagactaagaaagagaggagtcaaaaggtaaaagccagagttaagacggaggct
gtgaaggtaaagactgacagggtgaagaaaaagactggggatggagtggtgactaaaaag
aaagactcatcgtcgtcctcctcctcctctgccacgaaacccttaaagactattaaaagc
aaacctgaagatgcccccatctcaactacccctaaaaaggaaaggggtaaaagctctgca
gtgaggccaccgctgcttaagacccctccgctgtcttcccagaacctgtccctacatcat
gcctctcttcatgatggccctcgacctggccacgacatgaggggcagaagagatcttcca
cagggttgtggtctccttccccatccccatcaacacacaatcctccaccgacccccctcc
ccagacagtcggcggaggatgggagaagatggccgctccttactcagacctccgcctgga
aagctgagaagaatagatggtctagggggtggaggggatctcatctcccactctcacatg
tctcatcagcccccgctccacagactcccacccccctcagacaggcctggtcttcttcct
ctaccagggagccgtgagatgggccgtggagatgcagatcgaggatccatcagacctcta
atggaccttcaggtgaatcccctggcccagaggaggatcaagttgaacagagatctggga
agaaaaagcagcactgagatggcagcttcggacagagcaccgtcaggtcctgaaaagacg
acctccacctcggaccgatcagctgctgctaacatctgtgaaggagaccgacccggcagt
gcagcagaaggtgctggaagaaaagagcgggcagcatctgctgacaggggagtccccaga
gagagaccaggaagtgctggagagagactgcagggctcagaccgagaacagagcagaagc
tcgggactggacaaagagcaagacaggacttcaggatcggacagagaccgaggcagtgcg
tctgacagacagagggacagggtctcaggctcacagaagatagcagttgcagtggagaga
gaccccgaaggagagaggtctgtgaggagagagcgaaaaaactccagtggtggaagtgca
ggagggaggtctgtctgtctggataaaatgaccatcgccgagaaaacggccatctccagg
agcgtgacagaccctcaggagaagccaagcacatcatcaaaggagaaaggcgaagtgtcc
gaacggtcatctaaatctgacaggagtgtttccaaggacagaacagagaggagtgtcccc
tcaggagagaaaccacttgctgctcacagagaagcagtgaaagacggcgaggaatctgtt
gtgaagagcaaacccaggatcagccgaaaggctctgacgagcctcgccgtgagctccacc
agcactaggtcaactcaagaaacgaaacgagagtccgacaaagatcagaagagtgtatcc
tccaaacccgcagagcagcccccatcgagccccgggcacagccgtggccgtagcccaagc
atcagcccaacacccagcccggccagggaggagccgctcattcagcctcctcctcgctcc
aagtgggagagagaagatgacgaagaaggccaggaaaacggacttggtgcacccaaagac
ccgtcaccggtcccacagaggggccggggcagggaggggcaaactgaagcacctaaacct
gccaggggtgaaggccgggatgctacaagggaggagaggagaggagtattgagagaagag
aaaaaagggaaagcacccagggaagagagtaaaggtggtaggacagcacagacaaattct
gacaaaccaaccaaatccaaacttgtgagagaggaggggagaggagggggaggagcagca
ggaggaggaggaggaggaggaagagatgagggccgaggagtgacagggaaggaggagaga
ggtgcagaaggcagaggtggaggaggacgagaggagagtcgcggcccagagcccaggaga
cagcgtttgtgttcagacctgggtcgcgagacagacgaggcagcctttgtgcccgactac
agcgagggcgagggctcggagccggacagaggaagaagtggcagccccagtccgtcccaa
agccaaccctccagccccagccagagcaaccacagtggcgtggcggacaagaagaagaag
aaacacaagaaacataaaaaacacaagaagcacaagaagcacagcacccacgagaaagaa
ggagaacaaaaggaccacaagcacaaacacaagaaaaagaaacacaaaaagagcaaagac
aaagatgtgccggtagaagaggagacgacggagaaagcagtggaaggagctccatgctaa
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integrated database retrieval system
