Etheostoma spectabile (orangethroat darter): 116694632
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Entry
116694632 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116694632
Membrane trafficking [BR:
esp04131
]
Endocytosis
Others
Others
116694632
Endosome - Lysosome transport
116694632
Endosome - Golgi transport
116694632
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
116694632
NCBI-ProteinID:
XP_032380311
LinkDB
All DBs
Position
2:complement(1366859..1681659)
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AA seq
1223 aa
AA seq
DB search
MIAAHTLQHATAGITCASCTSPVQLHLEELQLAMRTDPTQEPDTLKNIRVEFRELGEKNT
GVEDDNETGFSVEDVPQFPQDVSLDGVSAEEDAPGSREESHGGSDEAVEPEKAEEAALRR
AKRSGPEFAEFSEDKHGRSGRAGVDARAPEGGRGSLFDGVKQSRSEFRWNRDEGGRADNR
QDEPKISSSTFSLTGDSAHNHAVVYWSGQNSSVILILTKLYDFHIGSVTESTLWRSTDYG
STYERMNDKVGSKTVLSYLYVCPTNKRKIMVLTDPEFESSVLISSDEGASYQKYRLAFYV
LSLLFHPTEEDWALAYSHDQKLYSSLDFGRKWQLIHERVTPNRFYWSVSGLDKELDLVHM
EAHTPDGNVQYVTCRAPMCTEANRNYPFPGYIDISSLVVQDDYIFIQVPTSGRASYYVSY
KRDSFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYNLYLSDTRGIYFTLAMEN
VKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTYVTYNKGRDWRLLQAPAANLDGN
EIHCILPFCSLHLQLQMSENPYLSGTISTKSSAPGILVATGNIGAELSYNNVGMYISSDA
GNSWRQIFEEEHNVWFLDKGGALIAVKQPSVPTRHLWVSFDEGRQWTQHSFSLVPLFVDG
VLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSRKCTDEDYETWHLHNQGEPCVMGQ
KQMYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYERRGDGNCRPAFWFNPSTV
SRSCSQGQNYLNSTGYRKVVLNNCTKGVKELYTARKQPCPNRPPKGLTLTTKDGKLTANL
GSNVTFLVHLDEGDSMRTNIQLDFGDGTAVSYSNLSWTEEGIKHVYKSAGIFRVTALADN
MLGSDATTLFLHVTCLVEHVQLLAPFVVIKNKEVNITAVVLPSHPRTVTYFWWLGNNTEP
VITLDGSISXTFSMDGMHTITVQVAAANTILQDTKTIAVKEFFKSLLLSFSPNLDEFNPD
VPEWRQDVGRVIKKALLQVSDFPEGQLLVAVFPGVPTAAELFLLPHKNQSEGRKKSEEEL
EQVSNIIVSALNQNLVEFEVKXGIRVIVYNTQLTLAPLVDSNPRHSSSAMLMLLSVVVLG
LAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTPKITLSEFSTSKELMEKELD
ARVKRGVGNACESTREIPNCTSV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgctcataccctacaacatgccacggcggggataacttgcgcatcttgcacc
tcgccagttcaacttcacctggaggaattacagctggcgatgcgcactgacccgacccag
gagccggataccctaaaaaacatccgagtagagttcagggaactcggggagaaaaacacg
ggagtggaggacgacaatgagacaggcttttctgtcgaggatgtcccccagttccctcaa
gatgttagtttggatggagttagtgcagaggaagatgcaccagggtccagggaagagagc
cacggcggcagcgacgaggcagtggagcccgagaaggctgaggaggctgcgctacggaga
gcgaagagaagcggtcctgagtttgcagagttcagcgaagacaagcacgggcggagcggc
cgcgctggcgtggatgcgcgcgctccggaggggggtcggggctcattgtttgacggagtc
aagcagagcaggtccgagttcagatggaacagggatgaaggggggagagcggataaccgg
caagatgagcccaagatcagcagcagcactttctctctgacgggggactctgcgcataac
cacgcggtggtttactggtcggggcaaaacagcagcgtgatcctgattctaaccaagctg
tacgactttcatattggcagcgtcactgagagcactctttggagatctactgactatggc
tctacatatgagagaatgaatgacaaagtcggatccaagactgtcctgagttacctgtac
gtctgtccaactaacaagagaaagattatggtgttgacagatccagagttcgagagcagc
gtgctcatcagctctgacgagggagcaagttaccagaagtaccgcctcgctttctacgtc
ctgagtctgttattccaccccactgaagaggactgggccctagcctacagccatgaccag
aagttgtacagttcattggactttggaagaaaatggcagctcatccacgaacgcgtcacg
ccaaacagattctactggtctgtctccgggctcgacaaggagctagatctggtccacatg
gaggcacatacgccagatggaaatgtgcagtatgtcacatgcagagctccaatgtgcaca
gaagctaacaggaactacccattccctggatacatcgacatcagctctttggtggttcaa
gatgactacatattcatacaggttcctacatcaggacgagcctcctattatgtgtcctac
aagagagactcatttattcaaatcaaactacctaaatattcgctgcccaaggatttacac
attgtcagcacagatgagaagcaggtctttgccgcggtgcaggagtggaaccagaacgac
acctataacctctacctgtccgacaccagagggatctacttcaccttggccatggaaaat
gtcaagaccactaggggcatcggagggaaccagatgctggatctgtacgaggtggcagga
attaaaggcatgttgattgctaacaagaggcaggacaaccaggtcaagacctacgtgacc
tacaacaaaggccgggactggaggctgctgcaggctcctgcagccaacctggatggaaac
gaaattcactgcatacttcctttctgttcactccatctccaactgcaaatgtcagagaac
ccttacttgtcaggaacaatctccaccaagagttctgcgccggggatcctagttgccacg
ggaaacatcggagcagagttgtcttacaacaacgttggcatgtatatatcgtctgatgct
ggcaatagctggagacagatttttgaagaggagcacaatgtgtggtttctagacaaagga
ggagccctcattgctgtcaaacagccttctgtgccaaccagacacttgtgggtcagcttt
gacgaggggagacagtggacccaacacagcttctccttggtgcctctgttcgttgatgga
gtcttggtggaggctggggccgagaaccagatcatgacattttttggacacttcagccat
cgttctgagtggcagctcatcaagatagactacaagtccatctttagcaggaaatgcaca
gatgaagactatgaaacctggcacctgcacaaccagggtgagccctgcgtgatgggacaa
aaacagatgtacatgaagcgcaggcctggaaactactgcatgctgggaaaggactactcc
agaatcctctcagctgagtcctgtatttgccgagctcatgactttgaatgtgattatgga
tatgagcggcgcggcgacgggaactgccggcctgccttctggttcaacccctccactgtc
tccagaagctgcagccagggtcaaaactacctcaacagcacaggttaccgtaaagtggtg
ttgaacaactgcactaaaggagttaaagaactatacacggccagaaagcagccgtgcccc
aacaggcctcctaaaggactcacgctgacaaccaaagacggcaagctcaccgccaacctg
ggtagcaacgtcaccttcctggttcatctagatgagggtgactctatgcgcaccaacatc
cagctggattttggcgatggcacagccgtgtcctattccaacctgagctggaccgaggag
gggatcaaacacgtgtacaagtctgccggaatattccgtgtcacagcgttggcagacaac
atgctgggttctgacgccacaactctcttcctgcatgtcacatgtctagttgagcatgtc
cagcttctcgctcccttcgtagtcataaagaacaaggaggtgaacatcacagcagtggtc
ttacccagccacccacggactgttacttacttctggtggctaggcaacaatactgagcct
gtgataacactggacgggagtatttcancaaccttctccatggacggaatgcacaccatc
acagtccaggtggctgcagccaacaccatactgcaggacaccaagaccatagcagtcaaa
gaattcttcaaatcgctacttttatctttctccccgaatctggatgagttcaaccccgac
gtacccgagtggagacaggatgtggggagagtaattaagaaggctctgcttcaagtgtcc
gacttcccggaggggcagctcttggtagccgtatttccaggagttccaacagctgctgag
ctcttcctgttacctcacaagaaccaatcagagggcagaaaaaagagtgaggaggagcta
gagcaggtatccaatataattgtaagcgcgctgaaccaaaacttggtggagttcgaagtc
aagnctggtataagggtgattgtttacaacacacaattaacattggcacccttggtggac
tccaacccaagacacagcagctcagctatgctcatgctcctatcagtggtggtcctgggc
ctagcagtgttcctaatctacaaattcaagagaaaaattccttggatcaacatatacgct
gaggtgaaccaggagaaagagcaggagatgatcggctcggtgggccagggtgacagcacg
cctaaaatcactctgagtgagttctccacatccaaagaactcatggagaaggaactggat
gccagggtcaaaaggggagttggaaatgcctgcgagagcacaagggagattccaaactgt
actagcgtgtaa
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