Etheostoma spectabile (orangethroat darter): 116694671
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Entry
116694671 CDS
T08457
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116694671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116694671
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116694671
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116694671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf_RING_Vps8_fungal
PHD_NSD
zf-UDP
zf_RING_Vps8
WWE_5
zf-ANAPC11
zf-RING_Vps41
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116694671
NCBI-ProteinID:
XP_032380363
LinkDB
All DBs
Position
2:complement(612595..640745)
Genome browser
AA seq
743 aa
AA seq
DB search
MANSNNMLLASVVVVWEWLNEHGRWRPYSPAVSHQIEAAIRSSDPRGGSVVLGQVDSRLS
PYIIDLQSMHQFRQDTGTIRPVRRSFYDPASAPGQGWQWEWENDAGTWTAYDMEVAIAIE
NAHSRQQPCLDLTPLGFCYLIDFQNMTQVNRQSQRCRRLQRRADMAYPLVSGPLPIPKGS
GAGGGITGALLGVGVSGASSFYSNGSLPATGLGQPCSCQQCMLVLSVKTNTIGAGIQTLG
RRSLTMQRPKNSAAIISKPLSPSKSATLGRGQQQNSNSNYYQTLPHGLAISKNTASPRRN
AQLFAQSLAALTAGTSTLGISSSSNRPPPPSLPPPQPPSSNPNLIPPSILAKHSSSSANE
SVPTATLITPANSVTTPPSPVPSPSPMVMKPQRPPTSAATVCHAPLPQRSSLAGLSRPAL
QRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAALPVCLTRPPKLVLH
PPPVSKSDIKPVPGFGHCCRKTTKKQARKGKTPEEVVKKYLQKVKSPPEEDCTICMEPLG
GPSGYKGPGVGPVSRAESIGRLAQCGHQYHFQCLVAMYNNGNKDGSLQCPTCKTIYGVKT
GNQPAGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGLQGPEHPNPGKPFTARGFPRHCYLP
DSERGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGFPDPG
HLDNVLEELRAQGITEDDGLMEK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagtaacaacatgctcctggcctctgtcgtggtggtgtgggaatggctaaat
gaacacggacggtggcggccctacagccccgccgtctcccaccagatagaggcggccatc
cggagcagtgacccccgcggagggagcgttgtactcggccaggtggacagtcggctctcg
ccgtacatcatagatctccagtctatgcaccagttcagacaggacacaggaaccatccgt
ccggtgcggaggagtttttatgacccagcctcagccccaggtcagggctggcagtgggag
tgggaaaacgatgcaggtacgtggacggcctacgacatggaggtggccattgccatcgag
aacgcccacagtcggcagcagccctgtctcgacctgacgccacttggcttctgctacctc
atcgattttcagaacatgacacaggtgaacagacagagccagaggtgtcggaggctacag
agacgtgctgacatggcctaccctctagtgtccggtcctctcccaataccaaagggaagc
ggtgcaggaggaggcataacaggagccttgctgggggttggggtgtcgggggcaagctct
ttctactccaatgggagcttaccggctactggattgggccaaccttgttcctgccagcag
tgcatgctggttcttagtgtaaagaccaatacaataggagcagggatacagactctaggt
agacgctcactaaccatgcagcggcccaagaattcagcggccattatctctaaacctctg
agtccgtctaaatcagccactctggggcgaggtcagcagcagaactccaactccaactac
tatcagacgctgccgcatggtcttgccatctccaaaaacaccgcctctccaagaaggaac
gcccagctgtttgctcagtcgctggctgcactcaccgctggaacctccactctgggtatc
tcctcgtcttccaacaggccgcctccgccatccctcccgcctcctcagcctccatcatcc
aaccctaacttgatccctccatccattcttgccaagcactcctcatcttcagccaacgaa
tcagtgccaaccgccactttaattacccctgccaacagcgtgaccacgcccccttctccc
gtgccatctccgtcgccgatggtgatgaagccgcagcgcccaccgacgtccgcagcaaca
gtgtgccatgccccgttgccacagagatcaagcttagccgggctgagccgaccagcatta
cagaggattgcgatggcccagtccagagcgctcatagcgtcaggtgtgcccaccgtccca
gtgaagaacctcaatggatccagtcctgttcaccctgcactggcagggatcacaggtatc
ctaatgagtgctgccgctctgccggtgtgtctgactagacctccgaaactggtgctacat
cctccgcctgtcagcaagagtgacatcaaacccgtgccaggctttggccactgctgcagg
aagaccaccaagaaacaggctcgcaagggtaaaactccagaggaggtggtaaagaagtac
ctgcagaaagtaaaaagtccaccagaggaggactgtaccatctgtatggagccgctgggg
ggtccatctggttataagggtccaggagtggggcctgtgtctcgggcagagtcaatcggg
cgactagcgcagtgtggacaccagtaccatttccagtgtttggtggccatgtataataat
ggcaacaaggacggcagtcttcagtgtcccacctgtaaaaccatctacggcgtaaagaca
ggtaaccagccggcagggaagatggagtaccacgtgatccctcactctctaccaggacat
cctgactgcaaaaccatacgcattatctacaatataccaccaggccttcagggaccagag
catccgaacccagggaagccattcactgccagaggctttccccgacactgctacctccca
gacagcgagagaggacgcaaggtactgagactgctcctggtagcctgggaccgcaggttg
atcttctcagttgggacttccagcactactggagagtccgacaccgttatctggaacgag
gtccaccataagacagagtttggctcaaacctgacaggccatggcttccccgaccccgga
cacctcgacaacgtcctggaagagctccgagctcagggcatcacagaggatgacggactg
atggaaaagtga
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