Etheostoma spectabile (orangethroat darter): 116694873
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Entry
116694873 CDS
T08457
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp02010
ABC transporters
esp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116694873
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116694873
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esp02000
]
116694873
Transporters [BR:
esp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116694873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
116694873
NCBI-ProteinID:
XP_032380624
LinkDB
All DBs
Position
9:complement(15471854..15503603)
Genome browser
AA seq
2381 aa
AA seq
DB search
MGFFRQLALLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSPTPGEAQGQFGNFDNSILSRLFVDAQTVLSYSGNQR
FSGFQDLMESVRRLGERPGAWPNLPVEEYLRPNETFSTFLLTNGSLSPVTVDQLLKARLN
FQVSVAGAQMQLKDLVCNASMLQQFLTVDGGEAAMNDLQTQLCNLPADVLREAERLFLSQ
LDFTKFFTRDRLMANAGDFRFISEAVTSVSQELAVLIDDLSSLSSFADMSAALRLLSPEN
RSALPRESFRAFSRIMCGHPEIGGERIPSLNWYEDNDIKSFLGKNGTEDTDMDHDNNTTP
FCKSLIQGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVQQVMKEVNKTFEDLQILQELN
EAWTEVGPQIKNYMESSVEIQLLQDLLRRPEVAVLVNLRLENTSWTASRIARFLSTPSPD
TPRKPGAAPTWLDIYNDLSHTLTTLAQVTECFSLNKLEGLETEGQMIDRALELLEDRQFW
AGVVFLLPNPSSPNLPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYVQDLVERAVSHILTGVKQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTGTLWFSWFISSIIPFLISAGLLIALLKWGDILPYS
NPTVVFFFLTAFANATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNT
TYRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLNSSPVEGDSYRFTTSIVMLYVDAF
IYATAAWYIEAVFPGEYGIPRPWYFVFQMNYWGGVPLELGMPIPPAPTDQDEDNIEPEPA
NLALGVSIRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRYDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEAEVKAELD
TLLEDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSRLGSGYYLTVVKRE
GMDTSTPSSTSICTSTSTNKLPPLKDSESSMSEDTGLGSEESSSYLAALLSLAQHHIPGA
RLVEDLGREAVVNLPQAAAKDSSLAIFLSELDQRLTEMGISSYGLSDSTLEEIFLRVAEE
TGVDAEPQLQAESPHRQQPSARQKAESQNAEEAETGRKRLRKQEPQETDLLSGEGRGGIP
LTGWWLTWQQLRALFIKRWLYARRSHRGFFAQIVLPAVFVLVALLFSLIVPPFGKYPALQ
LQPWMYGQQYTFYSNDAPGNPAIENLLEALLDQPGFGTKCMEKEEEDNSTRSPQCEGERG
GLFMRPQISYSTWQMFSRGNWSRDAPSPDCLCSTEDVRRMLPDCPQGAGGMPPPQIKRLT
GDILQNLTSYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGSATQTLSQVHHVQD
SIVAIRTRYRVPQNSSLDHLLNRLPDFLGGLNSQNNVKVWYNNKGWHAMVSFVNVMNNGL
LRASVPPGPERKKYGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASFV
LFLIEERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSET
NLPALVLLLLLYGWSITPLMYPASFVFTVPSTAYVVLTSINLFIGINGSIATFVLELFVD
EHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGTKQTLDPLQWDFVGKNL
FAMAAEGVIFFIFTILLQYNFFIRFRPWWAEPEMPPLGPEDEDVARERERVISGKAQSDI
LTMINLSKVYKLGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTSITYGEAL
LNHHSVLTEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEESVTKVAQWGVKK
LGLTQYAEREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVT
KEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGNGYTIILRLVDPQFN
LDSCPISTYMKSSFPSIELKERHQSVLQYQLPSHACCLARVFEVLANNYEEMGVIDFSVS
QTTLDQVFVNFAKEQTDDDFLTDVVIGNLTTLHNKITNLTIQPQPPITPPHSSKSPQQHG
KSSDSKPKENKSKKPKVGKGKSKDSKANGEKSSSTAMTRIPQREEKAQRTSRRGSSGSDS
SNDGVQGESSKSSKSKHREESSSKNPSALFIVDGNTQDSTL
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atggggttttttcgacagcttgccctcctgctctggaagaacatcacataccgcagaagg
aacaagatccagctgattatcgagctcctctggccgctcttcctcttcgtcatcctcatc
tctgttcgtcattcccaccctccctacaaacagagccaatgtcactttccaaacaaagcc
ttgccatcagcaggcaccttgccctggattcagggcattatctgcaacatcaacaacccc
tgcttccacagcccaacaccaggggaggcacaaggccaatttggcaactttgacaactcc
atactgtctcgtctcttcgtggacgcacagactgttctgtcctacagtggaaaccagaga
ttctctggctttcaggacctaatggagagtgtccgaaggctgggagagagacctggagcc
tggccaaatctcccagtagaagaatacttgagacccaatgagacgttctccaccttcctc
ctgaccaatggcagcctgtcgcctgtgactgtggaccagctgctgaaggctcgtctcaat
tttcaggtttcggtggctggagctcagatgcagctgaaggacttggtgtgtaatgcgagc
atgttgcaacagtttctgactgtggatggaggagaagccgccatgaatgatctccagact
cagctgtgtaacctgccagctgacgtcctgcgggaagctgaacgccttttcctctctcag
ctcgactttaccaagttcttcacaagagaccgtctgatggcaaatgctggagacttcagg
ttcatcagtgaggctgtcacttctgtttcccaggagctggctgtcctcatcgatgatttg
tcctctctctccagctttgcggacatgagcgcagctcttcgtcttctgtctccagagaat
cgctcagcgttgcccagggagagttttcgcgctttttcaaggatcatgtgcggtcaccct
gagattggcggtgagcgcatcccatcgctcaactggtatgaggacaatgacatcaagtcc
ttcttggggaaaaacggcactgaagacacagacatggaccatgacaacaacacaactcca
ttctgtaaaagtttgatccaaggtctggagtccaaccccctgtctcgcatcgtgtggcga
ggaataaaacctctgtttattggaaaactgttgtacacaccagacactcccgcagtacaa
caagtcatgaaagaggtgaacaagacctttgaggacctgcagatcctccaggagctgaat
gaagcctggacggaggtgggaccacaaatcaagaattacatggagagcagtgtggagatt
cagctgctgcaggatttgttgaggcggccagaggtcgctgttctggtcaacctgcgtctg
gagaacacgtcctggacagcctcacggatcgcacgttttctgtcaacaccctcgccagac
accccaaggaagcccggagcagcgcccacctggctggacatctacaacgacctcagccac
actttaaccacgctcgcacaagtcactgagtgtttctctctgaacaagctggaggggttg
gagactgagggtcagatgattgacagggctttggagttattggaagacaggcaattttgg
gcaggtgtggtatttctgctgcccaacccctcgtcccctaacctgccgccccacgtaacc
tacaaaatccgaatggacattgatgatgtgacccggaccaacaagatcaaggacaggttt
tgggatcctggtccagcagccgacccatttaatgacatgcgttacatttggggcggcttt
gtgtacgtccaggacctggtggagcgagctgtaagccacatcctgactggagttaaacaa
acaactggcatctacatccagcagatgccctacccctgctatgtggatgatgttttcctt
cgagtgctgaaccgctctctgccactcttcatgacactggcctggatctactcggtggcc
atgatcatcaaaggcgtggtatacgagaaggaggcgaggctgaaggaaaccatgaggatt
atgggtctgggaacaggaacgctgtggttcagctggtttatcagtagcatcatccctttc
ctgatctctgcagggctccttattgctctgctcaagtggggggacatcctgccatacagc
aatccaactgttgtgtttttcttcctgacggcgtttgccaatgccaccatcatgcagtgt
ttcctcatcagtaccttcttctctaaagccaacttggctgctgcatgtggagggctgatc
tactttggactttacctgccatacgtactgtgtgtagcctggagagaccgcctcaacacc
acctacagagtccttgctagtttcctgtcccctgtggcctttggcttcggctgtgagtat
ttctctcagtatgaagagcaaggcgtgggcatccagtggtacaacctcaactccagcccc
gtggaaggagactcataccgcttcactacctctatagtcatgctttatgtggacgctttc
atctacgccaccgcagcctggtacattgaggcagtgtttcctggtgaatatggcatccct
aggccctggtacttcgtcttccagatgaactactggggtggagttccccttgagttgggc
atgccaatcccccctgcacccacagaccaggatgaagacaacattgaaccagaacctgct
aacctggccctgggtgtgagcatcagaaacttggtaaaaatctacaagaagggagccaaa
ctggccgtcaatcacctcaacctgaagttctacgaggggcagatcacctctttcctcggc
cacaacggagccggaaaaaccaccaccatatctgtcctgactggcctgttcccacccacc
tcgggcactgtgtacatcaaggggatggacatccgctatgacatggacataatccggagg
acactgggagtttgtccacaacacaatgtcctgtttgacatactaacagtggaggagcat
gtgtggttttatgggtgtctgaagggtttatctgaagcagaagtaaaagccgagctggac
actctgctggaagacgtcggcctgctgcacaaacgacatgaacagacaaaaaatctctct
ggtggcatgcagaggaagctgtctgtggcgatcgcatttgttggaggctctaaagtggtt
gttctggatgaacccacagccggcgttgacccttactcccgcagagggatctgggatcta
ctgcttaaataccgcaaagaccggaccatcatcctgtccacccactacatggacgaggca
gagctgctcggtgaccggatcgctatcatctcacaggggaagctgtgctgctgtggctca
ccgctcttcctcaaatcccgccttggatctggctactacctcactgtggtgaagagggag
ggaatggacaccagcactcccagcagtaccagtatctgcaccagcaccagtaccaacaag
ctgcctcctctcaaggacagtgagtcatccatgagtgaagacaccggcctgggaagcgag
gagagcagttcatacctggcggcgttgctttccctggcacagcaccacatcccgggtgcg
aggctggtggaagatttagggcgcgaggcggttgtcaacctgccgcaggcggctgccaag
gacagcagcctagccatcttcctgtccgaactggatcagagactgaccgagatgggcatc
agcagctatggcctgtcagacagcacactggaggagatctttttgcgagtggcggaagaa
actggagtggatgctgaaccacagttgcaggctgaatctccccacaggcagcagccatca
gctagacagaaggctgagagtcaaaatgctgaagaagcagagacaggaaggaaaaggctc
cgtaagcaagaacctcaggagacagacctgctgagtggagaaggccgaggtgggatcccc
ctgaccggctggtggctgacctggcagcagctgagagctctcttcatcaaacgctggctt
tatgctcgaaggagccacaggggcttcttcgctcagattgtcctgcctgctgtgtttgtg
ctggtcgctctgctcttcagcctcattgttcctccgtttgggaagtatccagctctgcag
ctgcagccctggatgtacggacaacaatacaccttctacagcaatgacgcacctgggaac
ccagccattgagaacctgctggaggctctgctggaccagccaggttttggtaccaagtgc
atggagaaagaggaagaagacaacagcactaggagtcctcagtgtgaaggcgagcggggc
ggcctattcatgcgaccacagatctcctactccacctggcaaatgttcagcagaggcaac
tggagcagagacgcaccgtctcctgactgtctgtgtagcacagaggatgtccgccggatg
ctccccgactgtcctcagggtgccggtggaatgccgcctccacagattaagaggctgact
ggagacatcctgcaaaatctgacaagttataacatctctgattaccttgtaaaaacctac
tctcagatcctcaagaaaagcttaaaaaccaagaagtgggtaaatgaattcagatatgga
ggtttctccctcgggggcagcgccactcagactttatctcaggtccaccatgtccaagac
tcgatcgtggcgatcaggactcgttatcgagttccacagaacagttcactggatcatctg
ctaaacagactgccagattttttaggaggcctgaacagtcaaaacaatgtcaaggtgtgg
tacaataacaaaggatggcatgccatggtgtcatttgtcaacgtgatgaacaacggcctg
ttaagagcaagtgtgccaccaggtccagagaggaaaaagtacggcatcactgcctacaac
cacccgctcaacctcaccaaggaacaactcacggaaatggccatgatgaccacatcagtg
gatgttctggtttctatctgtgtgatctttgccatgtcctttgtgccggcgagcttcgtc
ctttttctgattgaggagcgagtcagcaaagccaaacaccttcagtttgtcagcggggtc
aaacccatcctctactggctggccaacttcacctgggacatgttgaactacacggtccca
gccaccatggtggtgctgatcttcatctgtttccagcagcagtcgtacgtctcagagacc
aacctgcctgctctcgtcctgctcctcctcctctacgggtggtccattacccctctgatg
tacccagcatcctttgtgttcaccgtcccaagcacagcctatgtggttctgacctccatc
aacctcttcatcggaatcaacggcagcatcgccaccttcgtcctggagctgtttgttgac
gagcatttgaacgaggtgaacaggatcctgaagaaggtgtttctcatcttccctcatttc
tgcctgggacgaggactcatcgacatggccaaaaaccaggccatggcagacgctttccag
agactaggcacaaagcagaccctggaccctcttcagtgggactttgtagggaagaacctg
tttgcgatggcagctgaaggtgttatattcttcatcttcaccatactgctgcagtacaac
ttcttcattcgcttcaggccgtggtgggccgagcctgagatgcctcctcttggtccagag
gacgaggacgtcgccagggagagagagagggtcataagtggcaaagcccagtcagacatc
ctcaccatgatcaacctgagcaaggtttataaattaggcaggaagcctgcagtggatcgt
ctctgcctcgggatccctcgtggcgagtgttttggcctgctgggggtgaacggagcaggg
aagacgtctacttttcgcatgctgaccggagacacgtccatcacctatggagaggcgtta
cttaatcatcacagtgtgctgacagagatggagcgagtccaccagctgatgggttactgt
ccacagtttgacgccatcagcgacttgctgacgggtagggaacatctggagctgtacgcc
cgcctacggggagtgccagaggagtctgtcaccaaggtggcgcagtggggcgtaaagaag
ctgggactgacgcagtacgctgagcgggaggctggaggctacagcggaggcaacaagaga
aaactctccactgccatctccctcattggggctccacctgttatattcctggatgagcct
accactggcatggacccaaaagccaaaaggtttctgtggaactgcatcctcagtgtcact
aaagagggtagagctgtagttcttacctcccacagtatggaggaatgtgaggctctctgc
accagaatggcaatcatggtgaacggcagattccagtgtctcggatctgtacaacacctg
aaaaacaggtttggtaatggctacaccatcatccttcgtctggtggaccctcaattcaac
ctggactcatgccccatcagcacctatatgaagagctcttttcccagcatcgagctgaaa
gagcgccaccagagcgtgctgcagtaccagctgccctcacacgcctgctgcctggctcgt
gtcttcgaagtgctggccaacaactatgaggagatgggcgtcattgacttctctgtttca
cagactaccctggaccaggtgtttgtcaactttgccaaagagcagacggatgatgacttc
ctcacagatgtggtcatcggcaatctcactacactgcacaacaagattaccaatctcacc
atccaaccacagccgccaatcactccccctcattcaagcaagtctccacagcagcatggg
aaatcatctgacagcaaaccaaaagagaataaatcaaagaagccaaaagttggcaagggc
aaatctaaagacagcaaagctaacggagagaaaagcagcagtacggcaatgaccagaata
cctcagagagaggagaaggctcagagaacaagcaggaggggcagcagtggatcagatagc
agtaacgatggagttcagggagaatccagtaaatccagtaaatccaaacacagagaagag
agctccagtaaaaatccttctgcactctttatagtcgacggcaacacacaggacagcaca
ctgtaa
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integrated database retrieval system
