Etheostoma spectabile (orangethroat darter): 116694943
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Entry
116694943 CDS
T08457
Symbol
tpr
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116694943 (tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116694943 (tpr)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116694943 (tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF7491
ERM_helical
Motif
Other DBs
NCBI-GeneID:
116694943
NCBI-ProteinID:
XP_032380767
LinkDB
All DBs
Position
9:13837074..13860373
Genome browser
AA seq
2391 aa
AA seq
DB search
MAALLLQELEASAISEIAKLPKTIQNKLEKIFSDQQYEIDYLKAQHEQFRVDSEQHFFEK
VKQLAQCQEEFLSQTQEYVKLKEDFTKQEEDLKSVLQKNKEYESAQERLSSEQTLLSKAK
EELEAEKRELVRTLERRSLEVEHLNDDFRQLNDKLVEVNTSKMALQMKLDELESAEVNIK
YKEKRMEQEKELLNGQTSWLNEELKAKSEELLSLSRQKGNEILELRCNLENKGDELNRLQ
DQVASLKTSNEHLQKQNEDMISKLKEAKEQQATMKEKFRNELNANIKLSNLYKGAAADSE
AKSEELSGAVEELHKLLKDAGEANKALEEKLQEMNGATDKSVTELKERIQGLEKELDNAN
ELLSSSKLRGPTGTSVLTEEQMTTMSPTAAAVSKIKPGMKLTELYSAYVESQEQLQLERL
ENKRVNKYLDDIVQEVEAKAPILKRQRDEHERLQKSVASLSAKLEQAVKEVHRLQKEADE
ANKRSSVLERENQRCELQLGDMAQQVRVLLIELEEARGNHVVHEEDVSSADVSSTSEVIS
QHLVTFRGVEELQKQNQRLLVALRDLSDAQEKEEFEATGNKRGELEQSLEKAKVELESLK
EQRGQQIKMTESIVRQRDMYRMLLAQATGVSFPQQGTPPEEFSLASTPRRSPAAMPTPGT
PTTLVSMATESAEALEAKAALRQLQEVFSTNKKEHMESTKAMTEQNEKLQDQISDLHSQN
AKISTQLEFASKRYEMLQDNVERYRKEIASLREKGQNMATASQKHEQTIHTLNEDLKAAK
EKLTMLEGHAETLRKERDMLKLVESRLNQEKESIMTQQQSQSLLLTNLQAIQATLERSET
DTRQRLNSQLEKQEREISQLQKRLEHEVEQRHLLSRNQEIQLLETKRQLELQLPLQQKTK
ELLNAAELELNTLRLQLGSNEARHTLSSPTTPIIRGLPGSDQDKEDLQCRLRLAESRAEE
LAESLRAATSSMEQYRAMAQSLEESLDKEKQVTEQARSSIEARIKEAENQHRRLEEKLLE
AEKDKNNLEEQKRRALATLEEEMNSLRTSLSSAQADHQAVLQQLAVAEAQQQQALQDSQE
QAKMAAEAQDKYEREMMLHAADVEALQAAKAQALQAIELRHQLDERAQRVSAELLEARVS
WGEQEKIIKEEMSKMESRYEDLQRQNTLLHEQIQTMSSKMADKLQHAASESPMNISLTEE
GKSQDQILEILRFVRREKEIAESRFEIAQGESLRYRLRVEHLERELKEMQDSLSAAKERM
QVTAKTLSQHDELMKKTETMSILMETNKMLREEKDKTAQELQQTQAKVQKLESDIMPLQQ
ANTELSEKSGMLQAEKKLLEEEIKRWKARTQHLVTQQKDSDPEKEAHLKRILQLTEDSNR
LKAEVLRSNNLTTSLQSQIQNLRDNVSKITDERNSLKKEIEIKNQELQEKGRTITQVKKI
GRRYKTQYDELKVEHDKLVAEAAAGPSQEEEARQASIQELQSLKDSLNQAEAKTKDLEGQ
LENINKVVTERETEGRNAQEQSSRLQAELTRLRQELQDKASQEDTLRQQMTEKEEKTRKA
IVYAKQKINQLMSTKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQERELRDLRGQ
QERQEQRDEPPEAGPSKTQEQQRSTEQRQISLKTTPAADRGSASTSEPPTANIKPTPVAT
GSKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAMQSTEGPPVEHVT
VYGSASGSVRSASPNVQTTLASPMLTVQQTQTQATAFVQPTQQQSMTHAEPANQEPSPVV
IEATTSSQVEWPSTSSTSSVFGTVSATPGTSSMSKRPREEEESATMVTDTESTQEDNSRA
PIPKKLRIIQRVGPEEEVLVEDSAEAEGVVPTDSQDGVEASQTEEFPVLEEGDDGAASQS
VTMDQEVTLTQSDTPEQLQHEVIVIVTDTESEEDQEEEDEEEEDQDYDEEEEEEEDEEEE
EDEDEEDEEEDDGEMGEEGEDSNEGSGDGNEAYEGDDPEGADVTDPGTETEESLGASDST
QRPADSQTHSLEGSTMETYSTEQPITSSGTRMPQSPRRPTHQLAPRLNIAPTSELGPPAQ
VQHMPVRRQSVGRVPQLTSGVPGSSQHFFDDDDRMVPSTPTLVVPHRSDGFDQAIHSPQV
AGVPRFRFGPSDDMPQPCSSSHSDLGQLASQGGLGMYESPLFLATHEEESGGRNVPITPS
QVATPVTIFSEVAQSDTAEHSSQSVPTVSTSTPGLPAAAATGEDRDDVFLEPDTDGSSGE
VSVDPVVSQGDIEEPGQQSAKASLPSTSQEPSSSSAGHLGPLTSHFWSSLGLGRSSGATT
PSQLRAPVCGTNCPITSDLPPLLSRSKHSSRPSYFLWHLNVLKVPLLFVML
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaagagttggaagcttctgcgatatctgagatagccaagcta
ccaaaaacaattcaaaacaaactcgagaagattttttcggatcagcagtatgaaatcgat
tatttgaaagcacaacatgagcaatttcgggttgacagcgagcaacacttctttgaaaaa
gttaaacaacttgctcagtgtcaagaagaatttttgtcccagactcaagaatatgttaaa
ctgaaagaggactttactaagcaagaggaggatcttaaaagtgtgcttcagaaaaacaaa
gaatatgaatccgcacaagagaggctgtcatcagagcagactctgctgtcaaaagccaaa
gaggaactggaggcagaaaagcgagaacttgtccgaacacttgaaaggagatcgttggaa
gtggagcatttaaatgatgacttccggcaactcaatgataagttggtggaggtcaacacc
tctaagatggccctgcagatgaaattggatgagcttgaatcagctgaagtcaacataaaa
tacaaggagaagcgcatggaacaagagaaggagctgctgaatggccaaacatcttggctg
aacgaagagttgaaggctaagagtgaggaactactgtccttgtcccgacagaagggaaac
gagatcctggaactgaggtgcaacctggagaacaagggagatgagttgaacagactccaa
gaccaagtggccagtttgaagacttcaaatgagcaccttcagaaacagaatgaggacatg
atcagcaaactaaaagaagccaaggaacaacaagctaccatgaaggaaaagttcagaaac
gagctgaatgccaacattaagctttccaatttatacaagggagcagcagcggattctgag
gcaaaaagtgaagagctgagtggggcagtggaggagctacataagctgctgaaggatgct
ggagaagcaaataaggcccttgaggagaagttgcaggagatgaatggtgccacagacaaa
agtgttactgagttaaaggagaggatccagggtctggagaaagagctggacaatgccaat
gagctgctgtcaagttctaaacttagaggccctactggtacatctgtgctcacagaagag
caaatgacgacaatgtctccaacagctgctgctgtatccaagataaagcctgggatgaag
ctgacggagttgtatagtgcatacgtggagagccaggagcagttgcagttggagcgattg
gagaacaagcgggtcaacaagtacctggatgacattgtgcaggaagtggaagcaaaagcc
cctatcctcaaacggcagagggacgaacatgagcgcttgcagaagtcagtggccagtctc
tctgccaagctagagcaggctgttaaggaggtacaccgtctgcaaaaggaggctgatgaa
gctaacaagcgctcctctgttctggaaagggaaaaccagaggtgtgaactgcagctgggg
gacatggctcagcaggtgcgcgtgctgctgatagagctggaagaagctcgtggaaaccat
gtggttcacgaggaggatgtgagctcagccgacgtcagcagcacatcagaggtgatcagc
caacacttagtgaccttccgtggtgtagaggagctgcagaagcaaaatcagcgtcttctg
gtggcccttagggacctcagtgatgcccaggagaaagaggagtttgaggccactggcaac
aagcgtggagaactggagcagagtttggagaaagccaaggttgagctggagtccctgaag
gagcagcgcgggcaacagattaagatgactgagtctattgtaaggcagagggacatgtac
cgcatgctgcttgctcaggccaccggagtcagcttccctcaacaaggtacaccacctgaa
gagttctccctggcctccaccccccgacgctcacctgcagccatgcccaccccaggaacg
cccaccacacttgtttccatggcaacagagtctgctgaagccttggaggccaaggcagct
ttgcgacagttgcaggaggtgttctccaccaataagaaggaacatatggagagtaccaag
gcaatgacggagcaaaacgagaagctccaggatcagatctctgaccttcattcccagaat
gccaagatatccacccaactagagtttgcctcaaagaggtatgagatgctgcaggacaac
gttgagcgctacagaaaagagattgcttctctcagagaaaaaggacagaatatggccact
gcctcacagaagcatgagcagaccatccacactttgaatgaggatctcaaagctgccaaa
gagaaacttaccatgcttgagggccatgctgagaccctgcgtaaggagagagacatgcta
aagctggtggagtccaggctcaatcaggagaaagagtcaatcatgacccaacaacagagc
caaagcctgctgctgaccaacctccaggccattcaggccactcttgagcgttcagagact
gatacacgtcagcgtctaaacagccagttggagaagcaggaacgagagatctcccagctg
cagaagaggctggagcacgaggtggaacaacgccacctgctcagcagaaaccaggaaatc
cagttgctggagacaaagaggcagcttgagctacagctaccattacaacagaagaccaag
gagctgctgaatgctgccgagttggagcttaacacactccggctgcagctgggcagcaac
gaagcacgtcacacccttagctcccctaccacgcccattatcagaggcctgccaggttca
gatcaagataaagaggacctacagtgccgcctgcggctggctgaatcccgggcagaagag
ctagcagagagcctcagggcagccacatccagcatggagcagtacagagccatggctcag
agtctggaggagtccctggataaagagaaacaggtaacggagcaggcgcgctcatctatt
gaagctcgtataaaggaggctgagaatcagcaccgtaggctggaggagaagcttctggaa
gcagagaaagacaaaaacaacttagaggagcagaagaggagagccctggccactctagag
gaagagatgaacagtctacggaccagtctcagcagtgcccaggcagatcaccaggcggtg
ctacagcaactggcagtagctgaagcccagcagcagcaagctctacaagacagccaggag
caagctaagatggcagccgaagcacaagataagtatgagcgggagatgatgctgcatgca
gcagatgtggaagctctgcaggctgctaaggctcaggccttgcaggctattgagctcaga
caccagctggatgagagagcccagagggtcagcgctgagctactagaggccagggtctcc
tggggggagcaggagaagatcatcaaggaggagatgtcgaagatggagagccgctatgag
gatttgcagaggcagaataccctcctgcatgagcagattcagacgatgagcagcaagatg
gctgacaagttgcaacatgctgccagtgagagtcctatgaacatctccctaactgaggag
ggcaaatctcaagaccaaatccttgagattctcaggtttgtgcgacgggagaaggagatt
gcagagtctcgttttgagattgcccaaggggagagtttgcgttatcgtctgagggtagag
caccttgaacgtgaactgaaggagatgcaggacagcttgagtgctgcaaaggagaggatg
caggtgacagcaaagaccttgtctcagcatgatgagctgatgaagaagacggaaactatg
agcatcctgatggagaccaacaagatgctaagagaagagaaggacaagacggcgcaagaa
ctgcagcaaacccaagctaaggtgcaaaagctggagtcagacatcatgccactgcagcag
gccaacactgagctgagtgaaaagagcggcatgctgcaagcggagaagaagttattagaa
gaagagatcaagcgctggaaagctcggacccagcatttggtgacccagcaaaaagattcc
gatccggagaaggaggcccatctcaaacgtattctgcagctcacagaggacagcaacaga
cttaaagcagaggttctcaggagcaataatctaacaacctctctgcaaagccagatacag
aacttgcgtgacaatgttagtaagataactgatgagaggaatagtctgaagaaggaaata
gagatcaagaaccaagaactccaggagaaggggcgaactattacccaggtcaagaagatt
ggacgccgctacaagactcaatatgatgaactcaaggtggaacacgacaagttggtagcc
gaggctgcagcaggtccatcccaagaggaggaggctcgtcaagcctcgattcaagagctg
cagagcctcaaagattctctgaaccaggccgaagccaaaaccaaagacttggaaggacag
ctggagaacatcaacaaggttgtcacagagcgcgagactgaagggcgtaatgcccaagaa
cagtcctccaggctgcaggcagagctgactaggctgaggcaggagctgcaagataaagct
tctcaggaggacacgctgagacagcagatgactgagaaggaggagaagaccaggaaggcc
attgtttatgctaagcagaagatcaaccagctcatgagcaccaaagaccagctgcagaag
gaaaatgaggagctaaaacaacagcgtgaggagctggaggtgcgggtgagcgctctcaag
tctcaatatgagggccgcctgagtcgacaggagagagaactgcgagacctgcgaggccaa
caagagagacaagagcagagagacgagccacccgaagcaggtcccagcaagacccaggaa
cagcagaggagcacagaacagagacagatcagtctgaagacgaccccagcggcagacagg
ggcagtgccagcacatctgagcctccaactgccaacattaagccaacacctgtggctaca
ggcagcaagcaacctgtcaatccggggaacaaacccactccaagagcaagcatcaggcca
atgattaccccagctactgtacccaccccaacacccacagctactgtcatgcccaccaca
caggtggagacccaggaagccatgcagtctactgaaggcccaccagtggagcatgtcact
gtgtacggcagtgccagcggttcggtgcgctccgccagccccaatgtccagaccacgtta
gcaagccccatgctgacagtgcagcagacccagacacaggcaacagcatttgtccaaccc
actcagcaacagagcatgacccatgcagagccagctaatcaggagccatcacctgtggtc
attgaggcaaccactagctcgcaggtggaatggccttcaacgtcctccacttcctctgtg
tttgggactgtttcagcaacgccaggtacctcctccatgtccaaaaggcctcgagaggag
gaggaaagcgccaccatggtcactgacacagagtccacccaggaggataactctagggct
cctatacctaagaagctgcgcatcatccaaagagtgggtccagaggaggaggtgctggtg
gaggacagtgctgaggctgagggggttgtaccaacagacagtcaagacggtgtagaagcg
agccagacagaggagtttccagtactggaggaaggagatgatggtgcagcctcccagtcc
gtcacaatggaccaagaggttaccctgacccaaagtgacacacctgaacaactgcagcac
gaagtgattgtcatagtaacagacacagagagtgaggaggaccaggaagaggaggatgaa
gaggaagaagatcaggactacgatgaggaggaagaggaagaagaagacgaggaggaggag
gaagatgaagatgaagaggatgaggaggaagacgacggagagatgggggaggaaggagag
gacagtaacgaggggagcggagacggcaatgaggcttacgaaggagacgacccagaggga
gctgatgtaaccgacccgggcacagagacagaggagagtttgggggcgtctgactccacc
cagaggccagcagattcccagacacacagccttgagggcagtacaatggagacatactct
acagaacaacctatcacaagctctggtacacggatgccccagtcaccacggagaccaaca
catcagctggctcctcgcctgaacattgccccaacatcagaactggggccacctgctcag
gttcagcatatgcctgttcgtcgtcagtcagtgggcagagtccctcagctcacttctggg
gtgccaggcagttctcagcacttctttgatgatgatgacaggatggttcccagcactccc
actctggtggtgccacaccgctcagatggttttgaccaggccattcattctccccaagtg
gccggtgtgcctcgcttcaggtttggtccctcagacgacatgccgcagccttgttcctcc
tctcactctgacctgggacagctcgcatcacaaggaggtcttgggatgtatgaaagcccc
ttgttcctagcaactcacgaagaggagtctggtggacgcaacgttcccattacaccgtca
caagttgcaacaccagtaacaatcttctcagaggtggcacagtctgacaccgctgagcac
tcctcccagtcagttcccacggtgagcacgtccacaccaggcctgccagcagcagccgct
acaggggaggatagagacgacgtcttcctggagccggacactgatgggtccagtggagaa
gtgtcagtagatcctgtggtctcgcagggagatatagaggagccaggccagcaatctgcc
aaggccagtcttccctccaccagccaggagccctcctctagctctgcaggtcacttaggt
cctctgaccagtcacttctggtcgtcccttgggctcggcagaagctcgggggcgaccacg
ccttctcagttgcgggccccagtctgcggaacaaactgccccatcacatcagatctgccc
cctctactgagtcgttcaaagcacagctcaagaccctcctattttctttggcatttgaat
gtacttaaagtgccactactatttgtcatgttataa
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integrated database retrieval system
