Etheostoma spectabile (orangethroat darter): 116695009
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Entry
116695009 CDS
T08457
Symbol
sbno2
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 2
KO
K26273
protein strawberry notch
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116695009 (sbno2)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116695009 (sbno2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
116695009
NCBI-ProteinID:
XP_032380926
LinkDB
All DBs
Position
9:38045122..38114358
Genome browser
AA seq
1603 aa
AA seq
DB search
MPTLPSALAMDGENYLHPEGPQLDSSLFSVATPNMENSIYASGSWGPYSQQAGYSIPCPM
QSGNQQYHLNSSTTTTTTPVVPMDIYSGFPDVDFGLNLSRNGDFSQDLSCIDDLSTNSLF
SSPXDSLSEYADAQSFISPDNLNTVPTLWDINTSTTNAPAQSQLELNGTSRFHGLASLDD
ITAIISTPPLGGFQPQRTQSPPEEEEDAEEEETEELGHVDTYAEYRPSKSTIGISHPDIV
VETNTLSSVPPPDITYTLSIPEGTINSGLLSALQLEAIIYACQQHEVILQNNQRAGFLIG
DGAGVGKGRTVAGIILENYLKGRKKSLWFSISNDLKFDAERDLKDIDAQNIPVHALNKIK
YGDTATSEGVLFATYSALIGESQAGGQHRTRIKQIIDWCKPDFDGVIIFDECHKAKNATS
TKMGKAVLDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRAFDDFLHAIEK
RGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRIEEIALDNDFKLVYNKAAILWAEALQVF
MRAADELGLVSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAQKELQAGKCIVIGLQST
GESRTREVLDENDGHLDRFVSAAEGVFQSLVTKHFPSEKQRREKAPGNKRKRKPRGRQPK
VHKHTMDSGGVINISDDSSSDSDGMDTDSNSSPDSLLDNDDVIFVNHTSCQTARIEEMKQ
GLLNKISMLGKELPLNTLDELIDKFGGPDKVSEMTGRKGRVVRCLDGSVRYESRAEQGLT
IDHINIKEKDRFMGAEKLVAIISEAASSGISLQADKRVRNQKRRVHMTLELPWSADRAIQ
QFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYN
FENKYGTKALDKITKAILGHIENKVPPPKGYPGGDAAFFRDMKLGMMDVGIFCRESRFGI
STEKDCSITKFLNRILGLEVHKQNYLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDE
IYEEKQETFLTVGNPQDGQVVLYKISVDRGMPWEEAFNRSLKLSGPDEGFYLSLKLRGNH
PCVLLAEQGRGKNLIVYKPNIGKQTHPESLDNLQQRYRKVTSEEAKDSWENQFTFSFKKC
SHANWNGKCKKIEEGQECLQGMRLRQYHMLCGALLRVWKRVSDVVSDITSSSILQIVRLK
TKQHNKQVGIKIPENCVARVREELLQMDEEVKRRRKEREQKAADLRLVEERNRKMEQENK
HLLANLFNSKPMLNHSLVQPPPQNPISQQQRLQAQTQPPLQQPPQNLHLLSLQRKHSQTQ
QRTHIWSNNSTTTTTTSQGPVPNTVSIRSNFSQFYPQSFVTPFQQLKNPSHPLHQTTLSP
NLSSKNPLDEILDLTVSSPSPSPDSTEGGLHLDSLGVHTVFGDDFNLESLISRTAPNAQQ
AAPVQQPILLQQPQQQHRQATQHQNHNLLANNQDLLDLFDLPLSPQMPTQKASPSPSTSS
CSSSTSSTSNNLASHVSAGLLPASTLMPTSSSSSLFSSPSSSSSLFSNSSPHFSSNYLIP
QSDSLSLPNGHSGTLDVREALNSMLQRGLDRTSVIRYREDSEL
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctgccctcagcgctggccatggacggggagaactacctgcatccagaaggc
cctcagctggacagcagcttgttctctgtggccacccctaacatggagaattcaatatat
gcctctggttcatggggaccctattctcagcaggctggatacagcattccctgccctatg
caatctggaaaccagcaataccacttgaacagcagcactaccaccaccaccactccggtt
gtgcccatggacatttactccggattccctgacgtggactttggcctcaacctctctagg
aatggagacttctctcaggacctgtcctgcattgatgacctctccacaaactctctgttc
tcttctccgnctgactccctgtcggagtatgctgatgcccagtccttcatcagcccagac
aacctgaacacagtacctaccctctgggacatcaacactagtaccaccaacgcaccagca
cagagccagttggagctgaatggcaccagcaggtttcatggcttggccagtttggatgat
ataactgctattatcagcaccccacctttaggaggattccagcctcagagaacccagtcc
cccccagaggaggaagaggatgctgaagaagaggagacagaggaactgggacatgtagac
acatatgctgagtacagaccttcgaaatccactataggaatttctcatcctgacatagtg
gtggagaccaacacgctatccagtgtccctcctcctgacatcacatacactttgtctatc
cctgagggaactataaacagtggcctactgtcagctctgcagctagaggccataatctat
gcctgccagcaacacgaggttatccttcagaacaaccagagggcaggcttcctgatcgga
gatggggcaggggtcggaaagggacgcaccgtggcaggaatcatcctggagaactacctt
aagggaaggaagaaatcactatggttcagcatatccaatgacctgaaatttgatgcagag
agggatctcaaagacatagatgctcagaatattcctgtgcatgccttaaacaagattaag
tatggagacacagctacctcagaaggagtcctgtttgcgacttactctgcgctgattgga
gagagccaggcaggagggcagcaccggacaagaattaaacagatcatagattggtgcaag
ccagactttgacggagttattatttttgacgaatgccacaaagccaagaatgccacatct
acaaagatgggcaaggcagtgcttgacctgcaaaacaagctgccccgggccagagtggtg
tatgccagtgccacaggtgcctctgagccaaagaacatgatctatatgagccgcctgggt
atttggggtgagggcacgcccttcagagcctttgatgacttcttgcacgccattgaaaag
agaggtgtcggtgccatggaaattgttgccatggacatgaaagtgagcgggatgtacatc
gccaggcagcttagcttctcaggggtgtctttccgcattgaagagatcgcactggacaat
gacttcaaactggtctataacaaagctgccatactgtgggcagaggcgttgcaggtcttc
atgcgtgcagctgatgagctgggcctggtcagcaggaagtcgctctgggggcagttctgg
tcgtctcaccagcgcttcttcaaatacctctgtatcgctgccaaggtccgctgcctggtg
gagctggcccaaaaagagctgcaggctggaaagtgcatcgttattgggctgcagtctact
ggagagtcccgtaccagagaagtcctggatgagaatgacgggcatctcgacagatttgtc
tctgcagcagagggagtgttccagtcccttgtaacaaaacatttcccttcagagaaacag
aggagagagaaggcaccagggaataagagaaaacggaagcctagaggtcgccagcccaag
gtacacaagcacaccatggacagcggcggtgtgatcaacattagcgatgacagcagtagt
gactccgatggcatggacacggactccaactcctcaccagactccctgctagacaatgat
gatgtcatctttgttaaccacactagctgccagacagccaggatagaggagatgaaacaa
ggcctcctcaataaaatatccatgctgggaaaagaactacctctcaataccttagacgag
ctcatcgataagtttggaggaccagataaagtctcagagatgactggtcgtaagggtcgt
gtggtgcggtgtcttgatggcagcgtccgttatgagtcacgtgctgagcaggggcttacc
atcgaccacatcaacatcaaggagaaagatcgcttcatgggtgcagagaagttggtggcc
atcatctcagaggcggccagctctgggatttccctccaggcggacaagcgagtgagaaac
cagaagcgcagggtccacatgactttagagctgccttggagtgcagacagggccattcag
caatttggtcgcacacatcggtccaatcaggtgacggccccagagtacatcttcctcatc
tccgagttggctggggagagacgttttgcttccattgtggctaagagactagagagcctg
ggtgcattgacccatggagacagaagagccacagaatccagagacctgagcaagtacaac
tttgagaacaagtatggtaccaaggctcttgacaaaatcaccaaagcaatccttggccac
atagagaacaaggtgccccctcccaaaggctaccctgggggtgatgccgctttcttcaga
gacatgaaacttggaatgatggatgtgggcatcttttgtcgagagtctcgctttgggatc
agtactgagaaagactgcagcatcaccaagttcttaaatcgcatcttgggcctggaggtc
cacaagcagaactatctcttccagtacttcaccgacaactttgactatctaatcgagaag
gacaagaaggagggcaaatatgacatgggaatcctagaccttgccccgggtaacgatgag
atctatgaggaaaagcaggaaactttcttgacagtcggaaaccctcaggatggacaggtt
gttctgtataagatcagtgtggacagaggcatgccctgggaggaggccttcaacaggtca
ctgaaactcagtggccctgacgagggattctacctgtccctgaagctgcgaggtaaccac
ccatgtgtgctgctagccgagcaaggaagaggcaagaacctgattgtctacaagcctaat
attggcaagcagacccatcccgagagcctggacaacctgcagcagcgttaccggaaggtg
acgtcagaagaagccaaggacagctgggagaatcagttcaccttctccttcaagaagtgt
agtcatgccaactggaatgggaagtgtaagaaaatagaagaaggtcaggagtgtttgcag
ggcatgcgcctccgtcagtaccacatgttgtgtggtgctctgttgcgtgtgtggaagcgt
gtatccgatgtggtgtctgacatcaccagctccagcatcctgcagattgtccgccttaaa
accaaacagcataacaagcaagtcggtataaagattccagaaaactgcgtggcccgtgtg
cgcgaggagctgttgcaaatggacgaggaggtgaagcggagacgaaaggagagggagcag
aaggccgcggacctgcggctggttgaggagcgcaatcgtaaaatggagcaggagaacaag
cacctcctggcaaatctgttcaactcgaaacccatgcttaaccactcccttgttcagcct
cccccccagaatccgatctctcagcaacagagactgcaggcccaaacccagcccccttta
cagcagcccccccagaacttacacctgttgtccttacagagaaaacacagccaaacccag
caaaggacccacatctggtccaacaattccaccaccaccaccaccaccagccaaggccct
gtccccaacacggttagcatccgctccaatttctcccagttttacccccagtcctttgtc
accccttttcaacagctgaagaacccatcacatccactccatcagaccacactgtctccc
aacttgtcttccaagaatcccctggatgagatcttggacctgactgtgagctcgccatct
ccgtccccagacagcacggagggcggactgcatctggacagtctaggggtacacaccgta
ttcggagatgactttaacctggagtctctaatctctcggactgcaccaaatgcccagcag
gccgcaccagtgcagcagcctattttgctacagcagccgcagcagcaacatcggcaggca
acacagcaccagaaccacaacctgctcgccaataaccaagacttattagatttatttgac
ctgcccctttctccccagatgcctacacagaaagccagcccttcgccctctacctcctcc
tgctcttcctccacgtcctccacctcaaacaacctggcttcacacgtctccgccggcctc
ctgcccgcatccaccctcatgccaacgtcgtcctcttcttctcttttctccagcccatcc
tcgtcctcctctttgttttccaactcttcccctcacttctcctccaactatctcatccct
cagtcagactcgctgtccttacccaacggccactccggcactcttgacgttcgcgaggct
ctgaacagcatgctacagcgcggtctggaccggacgtctgtcattaggtaccgggaagac
tcagagctttaa
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