Etheostoma spectabile (orangethroat darter): 116695111
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Entry
116695111 CDS
T08457
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116695111 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116695111 (usp24)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116695111 (usp24)
Peptidases and inhibitors [BR:
esp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116695111 (usp24)
Ubiquitin system [BR:
esp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116695111 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
DUF3517
UBA_RAD5A
UBA_7
Motif
Other DBs
NCBI-GeneID:
116695111
NCBI-ProteinID:
XP_032381063
LinkDB
All DBs
Position
9:complement(29266508..29312096)
Genome browser
AA seq
2633 aa
AA seq
DB search
METEEEQHITTLLCMGFPDPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGVGSTGDGENSGRTGTGGFDPPPAYHDVVDSEQSNDENGNCSEGSMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLIASTCLARHGLADADENCKRFIDRCMPEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELVAERLKQDPVPVNLMGVLTMAFNPDNEYHFKNRMKACQRN
WAEVFGEEANMFAVSPSNTYQKEPHGWLVDLVNRFGELGGFTAIQTKLNADEIEIACVSA
LVQPLGVGAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPDLLSAIKLLCM
RFQRELVAVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDKLL
DWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELSKIWKIQAGQSSTVIENI
HTIIAAAAVKFSFDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVLE
VLWELAHLPSLPTSLVQQALEEHLGILSDAYAVKETVKRSYIIKCIEDIKKTHTQVDSKG
SDTQSSFLTGTWGKKKANSLVKASQQSSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSI
IQDLKKNFEIVKLITGSLVCCHRLAVTAAGNNGLSGSILVDGRYTYQEYLDSHLRFLAFF
LQEASLYLVWNRAKELWECLVSGPDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRYRGGFGSTKLVIIERLLLLAERYVITIEDMYSVPRTILPHG
ASFNGHPVTLHITYESSKDTFSLETHSNETIGSIRWKIAEHLSCPVDNVQIFANDSVLTM
NRDQKLLSQLGFSDEQSLTVKSSGTGTPSGSSESSASASSSSSSAVFNSAYALEQEKSLP
GVVMALVCNVFEMLYQLANLDETRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQ
VHQMRSGHMKTLFQGTGSRSPSMASKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVL
SSKLMPTSDDEMAKTSSKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQ
LARFLLVGQSMPAALDDDVIRDGEALSSRPFRNAGRAGRQLSLCGTPEKSSYRQMSLSER
SSIRVEEIIPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRETHSSLL
PQGVRTRVSSTGSNCSSSSEGETTPTALHAGICVRQQCVSIKDTIIAREALSLLVTCLQL
RCQQLSSFYNLPSVNDFIIDVLLGSPSGEIRRVACDQLYTLSQSDTSAFAEVQKPNLFLI
SVILTAQLPLWSPTSIMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEVLKVSAATMLED
EISWLDNFEPSWSSEMETSEADNILLAGHLRLIKTLLSLCGNEKEHLGPSLIQQLLDDFL
FRASRIIINSSNPTPSPAPSHDFHPKCSTASSRLAAYEVLVMLTDSSLSNLRLITKELMS
MHHQSDPSLCKEFDYLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSIE
DDTDQPEESVFYQVQSLFGHLMESKLQYYIPENFWKIFKMWNKELYVREQQDAYEFFTSL
VDQLDEHLKKMGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEIS
LDQFVRGEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYD
EQIRFPWVLNMEPYTVSGMARQDCSGEGGEGRGDGTSGGSPRKKVTISENYELVGVVVHS
GQAHAGHYYSFIKDRRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNP
YPDVRRRYWNAYMLFYQKISDQNSPVLPKKSRVSIMRQEAEDLTLSAPSSPDISPQSSPR
PPRANNDRLTLLTRLVRKGEKKGLFVEKMPASIYQMVRDENLKFMRNRDVYNSDYFNFTL
SLASVNATKLKHPDYQPMAKESLQLAVHFLFHTYLHTKKKLRVDTEEWMATVDVLLSKSC
EACQWMVQYLVGPEGREITRVCLLECSVREVRVVVASILEKTLESALHFGDPGLDNLTDT
MLSLLDKDVPENVKNCAQYFGLFSNFAQRGCGPCQLLLKHSAYRRMLIFLLGPNRQNNQN
RRWSPAQAREFLHLHNTLALMTLHSDLNAQRTQAPGGFKLRVSCVPASTKLLPLHADILA
SLFTPEGQPYLQEVMFAMRELSGPLSLLIEMVTYTAYCNEPFSLGVLQLLKTQLETAPPH
ELKNIFQMLQELLVMEEPLQTQRLKYAFESEKGLLALMHQSNNVDSRRCYQCVKFLVTLA
QKCAPAKDYFKDLSGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKTFQRTISAQDTLA
YATALLNEKEQSGSSNGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7902 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaagaggagcagcacataacgacgctcctgtgcatgggcttcccagacccc
gacgtgatacggaaagcgcttcggctggcaaagaacgacatcaacgaggcagtggcgctc
ctgacaaacgaaagccccggactcggctatggatatgaaccgatggagagtgggcctgcc
cccggcgtgggctccactggagacggggaaaacagcgggaggactgggacgggagggttt
gaccccccgcccgcataccacgatgtagtggatagcgagcagagcaatgatgagaacggg
aactgctccgagggcagcatggagtttcccaccaccaatctgtacgagctggagagtcga
gtctttaccgaccactggtccataccttacaagagagaggagtccctgggcaagtgtctc
atcgcgtccacctgcctcgcccggcacggtcttgctgacgctgatgagaactgcaagcgc
ttcatagatcggtgcatgcccgaggccttcaaaaagttgctgaccagcagcgccgtgcac
aaatggggcaccgagattcacgagggaatctacaacatgctcatgttgctggtggagctc
gtagcggagaggctgaagcaggaccccgtacctgtaaatctgatgggagtcctgactatg
gctttcaaccctgataacgagtaccattttaagaaccggatgaaggcctgtcagaggaac
tgggctgaggttttcggagaagaggccaacatgtttgcggtctctcctagcaacacctat
cagaaagagcctcatggttggctggttgatttggtgaatcgatttggagagttgggagga
ttcactgccatccagactaagctcaacgcagatgaaatcgagattgcttgtgtgtcagct
ctggtccagcctctgggagttggtgcagaatacctaaactccagcctcgtccagcccatg
cttgatccagtcatccacaagatgatcacatatgtgcagaacctggaggaaaaggatctt
aaagacaagcgtctggtgagcatcccggacctgctgtcggccatcaagctgctgtgtatg
aggttccagagggagctggtcgctgtggtggatgacctacggctggacacactgctgcgc
atgctcaaaaccccccacttctctaccaagatgaactctctgaaagaggtgacaaagttg
atagaggagagcacagtgtcgaagacggtgaaaaatgccatcgacacagataaacttttg
gactggctggtagagaactcagtcctatcaatagcactggagggtaacattgaccaagct
cagtactgcgagaggattaagggaatcattgagttgctggggagtaaactctcgctggac
gaactctccaagatctggaaaatacaggcgggccagtcatcaactgtaatagaaaacatt
catacgatcatcgctgctgctgctgtgaagttcagcttcgatcaactaacccacctcttc
gtcctcatacagaagagctgggaggttgaaagtgaccgcgtgaggcagaagctgctcagt
ctgatcgggaggatcggcagagaggctcgctctgaaactacaacaggaaaggtgctggag
gtgctgtgggagctggctcacctccccagcctgcctaccagtctcgttcagcaggcgctg
gaggagcatctggggattctgagtgacgcctacgccgtcaaggagacggtgaaacgcagt
tacatcattaaatgtattgaggacattaagaagactcacactcaggtggactctaaaggc
agcgacactcaaagctcttttcttactggcacttggggcaagaagaaagctaactctttg
gtcaaagcttctcagcagagcagtcctcaggcagtctgggttgttcctgctctccgtcag
ctgcacgagatcacccgttctttcatcaagcagacctatcagaaacaagacaagagcatc
atccaggacttgaagaagaactttgagattgtcaaactgatcaccggatccctggtgtgc
tgccatcgactggccgtgaccgctgcgggaaataacggcctctcgggctcaattttggtg
gacggacggtacacctaccaggagtatctggacagccacctgcgcttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagggccaaggagctctgggagtgcctg
gtgtctggccccgatgtctgtgaacttgaccgtgagatgtgttttgagtggttcaccaaa
ggacaacatgacctggagagtgacgttcagcagcagctcttcaaggagaagatcctaaaa
ctggagccctacgagatcaccatgaatggtttcaatctatttaagaccttctttgagaac
gtcaatctgtgtgaccatcgcctcaaacgccagggcactcagctgtgtgtggagcgcctt
gacctggcagggatggattttatctggcgcattgccatggaaacccctgatgaagagata
gccaatgaagcgatccagctcattatcacatatagctacaccaacctcaatcccaaaatg
aagaaggactccgtgtctttgcacaagaagtttatagctgattgttacaagcgactggag
gcagctagctcggcactaggcgggcctactttgactcatgctgttactagggcaactaag
atgctgacggcaactgccatgccgactgtggccacatctgtacaatcaccatccaggtac
agaggggggtttggatccactaagctggtgataatcgaaagactgctgctactggctgaa
cgctacgtcatcactatagaggatatgtactcagttcctcgcactattctacctcacggg
gcctcgttcaatggacaccctgtcactcttcacatcacctatgagtcatccaaagacact
ttcagcttagagacacacagtaatgagacaataggaagtatccggtggaagatagctgag
cacttgagctgtccggtggataacgtccagatctttgccaatgacagcgtgttgaccatg
aatcgggaccagaagctactgtcccagctcggcttcagcgacgagcagagcctgactgtg
aagagctcaggcactggcactccctctggcagctccgagtcctcggcctccgcctcgagc
agttccagctccgccgtcttcaactccgcctacgccctggagcaggagaagtctctgccc
ggtgtggtgatggctttggtgtgtaatgtgtttgagatgctttaccagctggctaattta
gatgaaaccaggatcactcttcgtgtgaggaagctgctattgctgataccaacagatcca
gaagtgcaggatgctctagacaactttgttcccaaagaatccagtgtctggagccaccag
gtacatcagatgcgttctggtcatatgaagacactgttccagggtacaggctctcgttcc
ccatctatggcctccaagcagcagcaccagcccagcgctgcatccatcttggagtccctc
ttcagatcctcggccccgggcatgtccaccttcagagtgctgtacaacctggaggtgttg
agttcaaagctcatgccaacgtcggatgacgaaatggccaaaaccagcagcaagtccttc
tgtgagaacttccttaaagcaggaggcctcagtctggtggtgaatgttatgcaaagagat
tccattccctcagaggtggactatgagacgagacaaggagtctactctatctgtcttcag
ttggccaggtttcttctggttggccagagcatgcctgcagcgctggatgatgatgtcatc
agggatggcgaggcgctgtcatctcgtccgttccgaaacgccggacgggcggggcgacag
ctgtctctttgtggaactccagagaagtcctcctacagacagatgtctctctctgagcgc
tcctccataagagtcgaggagatcataccggctgctcgcgtagctattcagaccatggaa
gtgggtgactttacttccaccgtagcctgtttcatgcgtctgacctgggcagctgcagca
ggccgattggatctggttggcagcccacagccaatcagagagacccacagctcccttctg
ccacagggagtccgcaccagagttagcagtacaggaagtaactgcagctccagcagtgag
ggggagaccactccaacagcattgcatgcagggatatgtgtgaggcagcagtgtgtctct
attaaagataccatcatagcccgtgaggccctgtccctgttggtcacctgtctgcagttg
cgctgtcagcagctaagttctttttacaaccttccctccgtcaatgatttcatcattgat
gttctgcttggatctcccagcggagagatccgccgtgtagcttgcgatcagctctacact
ctgagccagtctgacacttcagccttcgccgaagtccagaaacccaacttgttcctcatc
tcagtcattctcactgctcagctgccattatggagtcctacatctatcatgagaggggtc
aaccagaggttgctgtctcaatgcacagagtactttgacctaagatgtcagcttttggat
gacctaacaacgtccgagatggaggtgttaaaagtgagtgccgccactatgctggaggac
gagatctcttggcttgacaactttgagccaagttggagctctgagatggagaccagcgag
gcggacaacatcctcctggcaggacacctccgactcatcaagaccttgctctcactctgt
ggtaacgagaaggagcatctcgggccatctctaatccagcagttactggatgacttcctg
tttcgcgcctctcgcattatcatcaacagttcaaaccccacgccctcgccggcccccagc
cacgacttccacccaaagtgcagcacagccagcagcaggctagcagcctatgaggtgctg
gtgatgcttacagacagctctctctccaacctccgactgatcaccaaagagctgatgtcc
atgcatcaccagtctgatccttcgctctgcaaggagtttgattacctaccccccgtagag
agccggtcagtctcaggttttgttgggttgaagaacggtggtgccacatgttacatgaat
gctgtgtttcagcagctctacatgcagcccggcctgccagaggctttcctgtccattgag
gacgacacagatcagccagaagaaagcgtcttctaccaagtgcagtctttgtttggccac
ctgatggagagcaaactgcagtactacatacctgaaaacttctggaagatcttcaagatg
tggaacaaggagttgtatgtaagagaacagcaggatgcttacgagttcttcactagcctg
gtggatcagctagacgaacatctcaagaaaatgggtcgagagcagatcttcaaaaacaca
tttcagggaatcttctctgaccagaagatttgtaaagactgtcctcaccggtacgagcgt
gaagaaacattcatggctttgaaccttggggtgacatcctgtcaaagcttagagatctca
ttggaccagtttgtcagaggagaggtgctagagggaagcaatgcctactactgtgagaaa
tgcaaggagaagagaaccaccgtgaagagaacatgcatcaaatccctgcccagcgttctc
tgcattcacctcatgcgctttggcttcgactgggaaagcgggcgctccatcaaatatgat
gaacagattaggttcccctgggtgttgaacatggagccctacaccgtctctggaatggct
cgtcaagactgcagcggagagggcggcgaggggcggggcgacgggacctctggaggatca
cccaggaagaaagtcaccatttctgagaactatgaactcgtgggagttgtggtccacagt
ggtcaggcacatgctggccactattactctttcattaaagatagacgtggtagcgctcgt
ggacgttggtacaagttcaacgacaacgtggtagaggagtttgatatgaacgacgaaact
ttggagtatgaatgctttggtggagagtaccgtcccaaagtttacgaccaatccaaccca
taccctgatgtgcggaggaggtactggaacgcctacatgttgttctatcagaagatcagt
gaccagaactcgcccgtcctgcccaaaaaaagcagagtcagcatcatgcggcaggaggct
gaggaccttacactgtctgccccgtcctctcctgacatttcgccccagtcctcgcctcgc
ccccccagggccaacaacgaccgcctcaccctcctcacccgcctggtccgcaagggagag
aagaagggcctgtttgtagagaagatgccagccagcatctatcagatggtgagggatgag
aatctcaagttcatgaggaacagagacgtctacaacagcgactacttcaacttcaccctc
tccctggcctccgtcaatgcaacaaagctgaagcatccagactaccagccgatggccaaa
gagagtcttcagctggctgttcacttcctctttcacacctacctgcacaccaaaaagaaa
ctccgggtggacacagaggagtggatggcgacagtggacgtgctgctgtctaagagctgc
gaggcgtgccagtggatggtgcagtacctggttggaccagaggggcgagagatcaccagg
gtttgtctgttagagtgcagtgtaagggaggtgagggtggtggtcgcatccatccttgaa
aagactctggagagcgctcttcactttggagacccgggcctggacaacctgactgacact
atgctttccttattggacaaagatgttccagagaacgtgaaaaactgcgcgcagtacttc
ggcctcttcagtaactttgctcagaggggatgcggtccttgccagctgttgttgaaacac
tcagcttatcgccggatgctcatcttcctgttgggacccaataggcaaaacaaccagaac
cgacggtggagtccagcacaggctcgagagtttcttcaccttcacaacacgctggccctc
atgactctacactctgacctcaacgcccagcggacgcaggctccaggagggtttaaactg
cgagtgagttgcgtcccggcctccactaagctcctcccactccacgcagacatcctggcc
tcactctttactccagaaggacagccttaccttcaagaggtgatgtttgccatgcgtgag
ttgtccggtcccctgtccctcctgatagagatggtgacctacactgcctactgtaacgag
cccttctctctgggcgtgctgcagttgctcaagacccagctggagacggctccacctcat
gagctgaagaacatttttcagatgctgcaggagcttttagtaatggaagaacctctgcaa
acccagagactcaagtatgccttcgagtcagagaaaggcctcttagctttgatgcaccag
agcaacaacgtggacagcagacgctgctaccagtgtgtgaagttcctggtcacgttagcc
cagaagtgtgctcccgccaaggattacttcaaggacttgtctggtcactggagctgggcc
gtacagtggctgcaaaaaaagatgactgaacattactggactccacagagcaatgtctcc
aatgagacatccaccaacaaaaccttccagcggactatctctgcgcaggacaccttggcc
tacgccaccgcgctgctgaacgagaaggagcagtctggcagcagcaacggctccgatggc
agcccagccaatgaaaacgccgaccgcagcctccgacaggggtcggagtctcccatgatg
ctcggggattcaaagagcgatctggaagatgtagacccatag
DBGET
integrated database retrieval system
