Etheostoma spectabile (orangethroat darter): 116695395
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Entry
116695395 CDS
T08457
Symbol
brf1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116695395 (brf1)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116695395 (brf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Ccs4_C
AcrIF11_ADP_ribosyl
Zn_ribbon_tTFIIB
RRN3
Motif
Other DBs
NCBI-GeneID:
116695395
NCBI-ProteinID:
XP_032381494
LinkDB
All DBs
Position
9:4523275..4730012
Genome browser
AA seq
691 aa
AA seq
DB search
MSSKVCRNCGSSDIDVDHARGDAVCMTCGSVLEDNIIVSEVEFVETGGGGSSAVGQFVSA
DGGNFNPSFGDGHHTGMGRESRAKTLQRARQNINTLGHQLQMNQHCLDTALNFYKMALMK
HLTTGRKSAHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLVLSRELCINAPA
IDPCLYIPRFAQLLEFGEKNHDVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
DFCRTIKEIVSVVKVCESTLRKRLIEFEDTPTSQLTVEEFLKTDLDQECDPPCFTAGLRK
KKVHQLEIELKKNMDDVEDEIQGFQDEIDSELQNNRPKLRGVYAAYAKEDGDKDDGNTLS
TSSKTDPDCKEQEEEDVLQAVAKHFGKDLDELTLEALLKLERKRPEEEEENQEEDVPKRK
APSLASILGQMPTAATLGLPESIGKCFGDGKENDGAADSGELDLSGIDDREIELYLLSDK
EIKVKTALWMAENSDYLKEQREKEAKIAKEKELGIYKEKKRRGPIKRHPPIRANTADEAI
EKMLEQKKISNKINYDVLKDLYIKPGASPARQAETPKKEPSATKLTGRNRQPARAPLSLS
TPLSTLGKRLQPFISGQPNKKLAVEQIANPNPLPVAAGAPASGAVVVVESGPVVYDDAAG
EEEEEEEEEACVSAMELLGSNEYGSDGDYED
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaaggtgtgtaggaactgcggcagctcggacatcgacgtggaccatgcccgc
ggcgacgccgtctgcatgacctgcggctcggtgctggaggacaacatcatcgtgtccgag
gtggagtttgtggagacgggaggcggcggctcgtcggctgtcggacagtttgtttctgct
gacggtggaaatttcaacccatcttttggagatggccaccacacagggatggggagggag
tcaagagctaagacgctgcagagagcgcgacagaacatcaacaccctgggtcaccagctg
cagatgaaccagcactgtctggacacggccctgaacttctacaagatggctctcatgaaa
cacctgaccaccggccgcaagtcggcccacgtcgttgctgcatgtctctacctggtctgc
cgcaccgagggaacgccacacatgctgctggacctcagtgatctccttcaggtgaatgtc
tacgtactgggaaaaaccttccttgttctgtccagagagctctgcatcaacgccccggct
atagacccgtgcctgtacattccccgcttcgcccagctgctagaatttggggagaagaac
cacgacgtgtccatgacagccttgaggctggtgcagaggatgaagagggactggatgcac
acgggacgaaggccgtcgggactctgtggagcagctcttctcgttgccgctcgcatgcac
gacttttgccgcactatcaaagaaattgtcagcgttgtaaaagtgtgtgaaagcacgcta
agaaaaagactgatagagtttgaggacacacccaccagtcagctgaccgtcgaagagttc
ctgaagaccgatctggaccaagagtgtgacccgccctgctttacagccggactgaggaag
aaaaaagtccatcagctggagatcgagctgaagaagaacatggatgacgttgaagatgaa
attcaaggcttccaggatgaaatagactcagagcttcagaacaatcgacccaaacttaga
ggagtctacgccgcctacgctaaagaagacggtgataaggacgacggcaacaccctctcc
acatcgtctaagacagacccagactgtaaggaacaagaggaggaagacgtgcttcaggcc
gtggccaagcactttggcaaagacctggacgagctgacgctggaggccctgctgaaactg
gagcggaagagaccagaggaggaagaggagaaccaggaggaggatgtcccgaagcgaaaa
gccccgtcgctggcgtccatcctgggccagatgcccacagcagccactctcggcctcccc
gagtccatcggcaaatgctttggagacgggaaggagaacgatggggctgctgacagtggg
gagctggacctgagtgggatagatgaccgtgagatagagctgtatctgctgagtgacaaa
gaaatcaaagtgaagacggcgctgtggatggcagaaaactctgactacctcaaagagcag
agagaaaaggaagcaaagatagcgaaggagaaagagctcgggatctacaaagaaaagaag
cgcagaggacccatcaagaggcaccccccaatccgagccaacaccgcggacgaggccatc
gagaagatgctggagcagaagaagatctccaacaagattaactacgacgtcctgaaggac
ctctacatcaagccgggcgctagcccggctcgccaggccgagaccccgaaaaaggagccg
tctgccaccaagctgacgggacgcaaccgccagcccgcacgggctccactcagcctcagc
acgccgctcagcaccctgggaaaaaggttgcagccgttcatcagcggacagcccaacaag
aagctggctgtggagcagattgccaaccccaaccccctgccggtggcagcgggagccccc
gccagcggggcggtggtggtggtggagagcggcccggtggtctacgacgatgcagctggt
gaagaggaggaggaggaggaagaggaggcttgtgtcagcgccatggagctgctgggcagc
aacgaatatggaagtgatggcgattacgaagattga
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