Etheostoma spectabile (orangethroat darter): 116695424
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Entry
116695424 CDS
T08457
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116695424 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116695424 (tgfbrap1)
Membrane trafficking [BR:
esp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116695424 (tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
SIKE
TPR-S
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
116695424
NCBI-ProteinID:
XP_032381594
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Position
1:complement(13181770..13196640)
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AA seq
875 aa
AA seq
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MSVKAFELVPAVERDLLMGDKARINIECIECCGKHLYMGTNDCFIHHFLLDEVTSSKGKL
SYSAQKLLHKYLGLKKPVAELRAASALERLIVLCDGIVFLVDMVTLETVPFAAGGGAKIR
GVTAFCINENPVNGDPFCVEMAVLSSKRRTVQIYMVHEDRVQLVKEVATPEQPCAVSVDG
YFLCLALATQYMILNYNTGASQDLFPYNREERRPIVKRIGREEFLLAAPGGLGMFANAEG
VSQRAPVNWSENVIGAAVCFPYVVALDESFITIHSMLDQQLKQTLSFRDGHILQDFEGKV
VLASTKAVYVLVPLPLERQIQDLLASHRVEEALLLTEGAQQNIPKDKFQVLHKRILQQAG
FIQFGQLQFLEAREHFRKGQLDVRELISLYPLLLPASSSFTRCHPPLHEFADLNHLAQGD
QEKVLRCKKFLISYLGEVRSTEVANGCKEDLDTALLKLYAEQDHDSLLDLLASDNACQLA
DSLPWLEKYHKYFALGLLYHYNGQDSAALQLWIRVVDGDLQDSTRSDLYEYIVDFLYSCS
NLDLVWKYADWALQKDPTIGVHIFTKRPARKDLSELNPDDVITYLEKHSHALLLYLEHLV
LERRTKKEKFHTHLAVLYLERVLSLLSESPTDEQKVTRARERLQALLRESNLYRAQFLLG
KMENCEQLLLERATLHGKLEEHDKALHILVHKLRDFPSAEAFCMWASSCRDSAYRQQLFH
LLLGVYLDQNFSGKSQTAAGGGDLEMAAVDLLNRHGEVFDAVRVLHMLPEGWSLQLLRPF
LGRAIRASMHACRTSQIALGLAHSENLQLLHDRLKDRKKPIFVSEKKGCHLCHNTFSEPD
VVCLPGGVPVHTHCVAQRVRDSPTKRQLTNSSNHT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaggcttttgagcttgtccccgctgtggagcgagatctcctcatgggcgac
aaggctcgcatcaacatcgagtgtattgaatgctgtggaaagcacttgtacatgggtacc
aatgactgcttcatccaccacttcctgctggatgaggtcacttcctccaaaggaaaactg
agttactcggctcagaagctgctacacaaatatctgggcctcaaaaaaccagttgctgag
ctccgtgctgcatccgctttggagcgtttgatagtgctttgtgatggaattgtcttcctg
gttgacatggtgacgctagagaccgtgccctttgcggcaggaggtggagccaagatcaga
ggtgtgacagcgttctgcattaatgagaatccagtgaacggtgatccgttctgtgtggaa
atggccgtgctctcctccaagcggcggacagtgcagatttacatggtgcatgaggacaga
gtgcagctggtcaaagaggtggccactcctgagcagccctgtgctgtcagtgttgacggg
tactttttgtgcctggccctggctacacagtacatgattctgaactacaacacaggagct
tcccaagacctctttccttacaacagggaagagaggagacccatagtgaagaggatcggc
agagaggagttcctcttagcagcacctggtggtctgggaatgtttgccaatgcagaaggg
gtatctcagcgggctccagtcaactggtcagagaacgtgattggtgctgctgtgtgtttt
ccgtacgtggtggctttggatgaaagcttcatcaccatccacagcatgttggaccaacag
ctaaaacagaccctttcattcagggatggacacattctgcaagactttgaaggaaaggtc
gttctggcttccactaaggcagtgtatgtcctggtacctctgccgctggagagacagatc
caggacttactggccagtcacagagtggaggaggcactcctcctcacagagggagcacag
caaaatattcccaaagacaagttccaggttttgcacaaaagaattctccagcaggcaggt
ttcatacagtttggccagcttcagtttttagaagcaagagaacacttcaggaaggggcag
ctggatgtgcgggagctgatatctctctacccactgctgctgccagcttcctcttcattc
acacgctgccatcctcctcttcacgagtttgcagatctcaaccacctggcacagggcgac
caggaaaaagtgctgcgatgcaagaaattcctcatcagttatttaggagaggtacgaagc
acagaggtggccaatggctgtaaagaggacttggacactgcactgttaaagctgtatgca
gaacaggatcatgacagccttctagatctgctagcgtcagacaatgcctgccaactagca
gacagccttccatggctggagaaatatcacaaatattttgcacttgggctgctctatcat
tataatggtcaggattcagcagcacttcagttgtggattcgcgtggtagatggggatctg
caagactccacaagatctgacctttatgagtacattgtggactttctctactcctgttcc
aacctggacctcgtctggaagtatgcagactgggccttgcagaaggatcccactataggt
gtccacatttttactaaaaggcctgccagaaaggacctgtcagaactgaaccctgatgat
gtcatcacttacctggagaagcacagccatgcgctgcttctctacttggaacacctggtg
ctagagagaaggacaaagaaggagaagttccacacacacctggccgtgttgtacctggag
agggtcttgtcactgctgtcggagtcgccaacagatgagcagaaggtcaccagagctaga
gagaggctccaagccctgctcagggagtccaatctataccgtgcacagtttcttttaggt
aagatggagaactgtgaacaactgctgctagagcgtgcaacactacatggaaaactggag
gagcatgataaagcactgcacatcttggttcacaagctgcgagacttcccatctgctgaa
gccttctgtatgtgggcctcttcttgtcgggattctgcgtaccgacagcagctgtttcac
ctgctcttgggggtgtatctagaccaaaacttttcaggaaaatcccagactgcagcagga
ggtggagacctggagatggcggcggtggacctcctaaatcggcacggcgaggtgtttgat
gcggtccgtgtcctgcacatgctccctgagggctggtcgctgcagctgctgcggcccttt
ctggggcgagccatcagggccagtatgcatgcctgccgcacctcccagattgctctgggg
ctagcacactctgaaaaccttcaactgctgcatgaccggttgaaagaccggaagaaacca
atctttgtctctgaaaagaaaggatgccacctgtgccacaacaccttcagtgagcctgac
gtggtgtgtctgccaggcggagtgcctgtccacactcactgtgtcgcccagagagtaaga
gactctcccacaaagagacagttaactaatagcagtaaccatacgtga
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