Etheostoma spectabile (orangethroat darter): 116695425
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Entry
116695425 CDS
T08457
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116695425
04020 Calcium signaling pathway
116695425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116695425
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116695425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116695425
NCBI-ProteinID:
XP_032381560
LinkDB
All DBs
Position
9:21967629..22061329
Genome browser
AA seq
2546 aa
AA seq
DB search
MLEPGSCSVSSQSLTMGHNDLGLPRAPSGLECPGEGLGMGAICGSSIPRHHILYSSPTDC
ETWQKHPAELVEGSSLLSESHSLLEPQSLSTSYDPLYLPHMSGQAPPLHPNRLGLSLDVA
STFEVGGGMLGVDGDLAASPNVMKRRRGGLIEQRDIVKAHQAHKIHSTPQARRKEWEMAR
FGDEVPGLLSPGDGGSDRNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRENCF
TVNRSLFIFGEDNVVRKYAKKIIEWPPFEYMILTTIIANCIVLALEQHLPGEDKTPMSKR
LEKTEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHMNIS
VDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFY
SGKLHYTCTPQPGILENETVDSSEYEVPCGVRQCPAKYTCGDTWIGPNDGITQFDNILFA
VLTVFQCITMEGWTTVLYNTDDALGPNWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKER
ERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDALRSLPEWST
GGAYVLKRATTIKRRGMDVVHRGQPGEEQYGDISSVGIPMARASIRSAKRGPTAYFHRKE
RLLRISIRRVVKTNTFYWTVLGLVALNTLCVAIVHHNQPLWLSNFLYYAEFLFLALFLTE
MFLKMYSLGPRLYFHSSFNRFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKI
TKYWASLRNLVVSLMNSMKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTF
PAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAV
DNLANAQELTKDEEEAEAAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHRS
RPTYSCSLDEGSIREGRQPPPLNPSTSFMSRRERRTRMTMSVWEQRTSQLRRHRQMSSRE
ILFSSPNEEKDGPPASAQAQHVHPQSLHRKAMEHTLSGSLKHLRDPLASPSKNQALGXXX
XVDMALDAALSGHIPELPVVLVPELLDPTNVPLSDASVSVAIPEPPESDSITESRKLGVK
PSQNTVSERRSPRLNGERQHRAVKKFRPPDNLDTLTPEMGGHGGIRGRRVLHHRDPHSGA
RSKGSLPSGNESHLASRSVSRERRRNPGNVVEKEAETKKVDEVSKPDESRQGDRSGGDTD
PPENQSHSGDQCPQKQEEPLQQSDPSPPVIPESNKDEKGIEQDQDKCELSSSVIIEVPNV
QSSLELSTISVNIKDHETCKPEEAEETKPVNTVTPDSMFIFKPDNPVRRACHYVVNLRYF
EMSILLVIAASSIALAAEDPVATSSNWNKVLRYFDYVFTGVFTFEMIIKMIDQGLLLHDG
SYFRDLWNILDFIVVVGALVAFALSNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCQGYYID
YGKDKKEVKRRDWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSHGN
RMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAIGAKP
LTRYMPQNRHTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLKHLNT
AFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQFVDTFNMSFLKLF
RAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEET
HITQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQKCETDTSLPPAVPTSDQEGGCG
SDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAA
CGRIHYNDMYEMLTNMSPPLGLGKKCPSKLAYKRLVLMNMPVDDDMSVHFTSTLMALIRT
ALEVKIARGGEDRNQMDLDLQKEIGVIWPHLSQKTLDVLVPIQKAGDMTIGKIYAAMMIM
DYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPPEILCNAKSLSFLRHSAGSALTRGGFL
ALSPISPQEMFLQPLSHSREEKEEDDGDYRSPYHPYHHPHHQHHHLQTLVPDVVEYNQVM
QQARQDATVIKSPQRTASIRASSMPRLAVDPLPGMSADSKLIKRSFSTIGDQCVNGLWQE
QHSLERVSPDGSYRPRQRSYRGPRVNHKETSSHERGRSKERRHLLSPDVSRCNSEERSHD
PSCERTRSRSPSEGRTHTLQRQVNTTGSPVHSASDSGTPRNRRQLPQTPSRPRPFISYSP
LVCQAHNSPAPTASSEGQTQPQDGAGGSTENLWRADKEGGPLTGGQGSFGGQVLGPSNPS
PHRYISEPYLPFHDDGSGGEAGDGQETLTFETAIATSLGRANAISSAPQLRHSWQVPNGH
FRKHLGQASPAQAKELLSDTDEDDRC
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaccgggctcctgttcggtcagctctcagtctctgacaatgggccacaatgat
ttggggctacctagagccccatcagggttggagtgtccaggggaaggtctgggaatgggg
gcgatatgtggtagcagcattccgaggcaccacatcctttactcgtccccaacggactgt
gagacctggcagaagcatcccgcagagctggtcgaagggtcaagcctgttgtctgagtcc
cactccctgttggagccccaaagtctctcaactagctatgaccccctctacctcccacac
atgtctggccaggctccccctctacatcctaaccgtcttggcctctctcttgatgtggcc
tcgacttttgaagtcggagggggaatgctgggggtggatggagatttggcagccagtccc
aatgtgatgaagagacgtcggggcggcctgattgagcagagagacattgttaaagcccac
caggctcataagattcacagcacaccacaagcacgacgcaaggagtgggaaatggcccgg
tttggagacgaggtcccgggcttgttgagcccaggggatggagggtccgatcgcaaccgg
aaccgcgatggggcggccgtgtccacaggtggcatctccccagcctttaagcagaccaaa
gcgcagcgtgctcgcaccatggccttgtacaacccaatcccggtcagggagaactgcttc
accgtcaacaggtccctcttcatctttggcgaggacaacgtggtcaggaagtacgcaaag
aaaatcattgagtggcctccatttgaatacatgatcctcaccaccatcatcgccaactgt
atcgtcttggctctggagcagcaccttcctggagaggacaaaacgcccatgtctaagaga
ctggagaagacagagccctacttcattgggatgttctgttttgaggctgggataaagatc
atcgccctgggctttgtttttcataaaggttcctacctcagaaacggatggaacgtcatg
gacttcattgtggtcctcagtgggatccttgccgcagcaggggcacacatgaacatctca
gtggacctgaggaccctgagggcggtgcgagtgctccgacccctcaaactggtctcaggc
atccccagtctccagattgtcctgaagtccataatgaaagccatggttcctctgctgcag
atcggcctgctgctcttttttgccatcctcatgtttgccatcattggcttggagttttac
agcggcaaactgcactacacctgcacgccacagcctggaatactggaaaatgagacagtg
gactcctcggagtacgaggtcccgtgtggcgtgcgccagtgtcctgccaaatacacttgc
ggcgatacttggattggccctaatgacggcatcactcagtttgacaacatcctgtttgct
gtcctcactgtcttccagtgcatcaccatggagggatggaccactgtactctacaatacc
gatgatgccttgggccccaactggaactggctctacttcatccctctcatcatcatcggc
tctttctttgtcctgaacctggtgctgggagtcctttctggggaatttgccaaggagagg
gagagggtggaaaaccgcagggccttcatgaaactgagacgccaacagcagattgagaga
gagctcaacggctaccgggcctggatcgacagagcagaggaagtgatgctcgcagaggag
aataagaattcaggaccttctgccctcgatgctctcaggagcctcccagagtggagtaca
ggtggtgcttatgtattaaagagagccaccaccatcaagaggagagggatggatgtggtg
catcgaggtcaaccaggggaggaacaatatggtgacatctcctctgtgggcatccccatg
gccagagcaagtatcaggagtgccaagcgaggtccaacagcgtattttcatcgcaaggag
cgtctcctgcgcatctccattcgccgtgtagtgaagacgaacactttctactggacagtg
ctgggcctagtggctctcaacacgctgtgtgtggccattgttcaccacaaccagcccctc
tggctgtccaacttcctctactatgcagagttcctgttcctcgctctgtttctgactgag
atgtttctgaagatgtacagtttggggccgcgtctctacttccactcctccttcaatcgc
tttgactgcagtgtgattgttggcagcatctttgaagtgctgtgggggttcttcaggcct
ggcacttcctttggcatcagtgtcctgcgtgctctccgtctgctaagaatcttcaagatc
accaagtattgggcatctctgagaaacctggtcgtctctctgatgaactccatgaagtcc
atcatctccctcatcttcctcctctttctcttcatcgtcgtctttgcactccttggcatg
cagctcttcggtggcaggttcatcttcgaagactacaccccaacaaactttgacacattt
cctgctgcaatcatgaccgtctttcagatcctgacaggtgaggattggaacgaggtgatg
tacaacggtattcgctctcaaggaggagtgaagtctggcatgtggtcctctatctacttt
atagtgctaacactgttcggaaactacacactgctgaatgtcttcttggctattgctgtg
gataaccttgccaatgcacaagaacttactaaggatgaagaggaagcagaggcagctttc
aaccagaagcatgctctccagaaggcaaaggaggtcggaccgttgtcgtccttcatgtct
tcagagggaagccggaggaggcggccctacctgtacaggaaaagagccatccaccgcagc
cggcctacctactcatgctccctggacgagggcagcatcagggagggccgccaaccccca
ccactcaacccctctacctctttcatgtccaggagagagagaagaacaaggatgaccatg
tcagtgtgggaacagaggactagccagctgcggagacaccgccagatgtccagccgagag
atcctgttcagcagtcccaacgaggagaaagacgggcctcctgcttcagcccaggcccag
catgtacatccccagtcactgcaccgcaaggccatggagcacacactgtcagggagtttg
aagcacctgagggaccccttagcctccccatccaagaatcaggctttaggcnnnnnnnnn
nctgtggatatggccctggatgccgccctctctggccacataccagaactcccagtggtt
ctggtaccagaattgttggatcctacgaacgtgcccctttcggatgcttctgtgtctgtg
gccataccagaacctcctgagtcagactccatcacagagagcagaaaactgggcgtaaaa
ccgagtcaaaacactgtcagcgagcgtcgtagccccagattgaatggcgagcgtcaacac
agggcagtaaagaagttcaggccaccagataaccttgacacactgactcctgagatggga
ggtcatggtgggatcaggggcagaagggtgctacatcaccgtgaccctcacagtggggcc
agaagtaaagggtcattgccatcggggaatgaaagccacttggcgagtcgctcggtcagc
agagagaggaggagaaatccggggaacgtggtggagaaggaggcagagaccaaaaaagtg
gacgaggtgtccaaacctgatgagagcagacagggtgacaggagtggaggagacactgac
ccaccggaaaaccagagccactctggtgaccagtgtcctcagaagcaggaagaacctctt
cagcaatcagacccgtctcctcctgtcatcccagagagcaacaaagacgaaaaggggata
gagcaggaccaggacaaatgtgagcttagctccagtgtgatcatcgaggtgcccaacgtt
cagtcatctttagagctctccacgatctcagtcaacatcaaggaccatgaaacctgtaaa
ccagaggaggcagaggagacaaagcctgtcaacactgtgaccccagacagcatgttcatc
ttcaaacctgacaacccggttcgtcgagcttgtcactacgtggtgaacctcaggtacttt
gaaatgtccatcctgctggtcatagctgctagtagtatagcactggctgctgaggaccct
gtagccacctcctctaactggaataaggttctgcggtattttgattatgtgttcaccgga
gtctttacatttgaaatgattataaagatgattgaccagggtctgctcctccatgacggc
tcctacttcagagacctgtggaacatccttgactttatagtcgtggtgggagcattggtg
gccttcgccctctccaatgtgatgggaaataacaaaggacgggacattaagaccatcaag
tctctaagagtgttgcgtgtcctcagaccgctaaagaccatcaagagacttcctaaactc
aaggcggtatttgactgtgtagtgacgtctctgaaaaacgtcttcaacatcctgatcgtc
tacaagcttttcatgttcatctttgccgtcatcgctgtgcaactctttaaggggaagttt
ttctactgtacagacagttccaaggacacagaaaaggattgccagggttactacattgac
tatgggaaggataagaaagaggtgaagaggagagactggaagagacacgagtttcactat
gacaacgtcatctgggctctgctcactctcttcactgtttccactggagagggatggcct
caggttctgcagcactcagtggacgtgacagaggaggacaggggtccgagccacggcaac
aggatggagatgtctatcttctatgtcatctactttgtcgtctttcctttcttctttgtc
aacatcttcgtggctctcatcatcatcaccttccaagaacagggcgataagatgatggag
gagtgcagcctggaaaagaatgagagggcgtgcatagactttgccatcggtgccaagccc
ctgacccgttacatgccccagaaccggcacacattccaataccgtctgtggcattttgtg
gtgtcgccctcttttgagtacaccgtcctggccatgatcgctctcaacaccattgtactt
atgatgaagtattattctgccccgccagcatatgaagccgtactgaagcatctgaacaca
gctttcactgttctcttctctgttgagtgcgtcctcaagatcatggcctttgggtttttg
aactactttcgagacacatggaacatttttgacttcatcactgttttgggcagcatcaca
gagattgtggtagacttgcagtttgtcgatacgttcaacatgagtttcttgaagctgttc
cgagcagctcgtctgatcaaactactccgacaaggttacaccatccgcattcttctgtgg
acctttgtccagtccttcaaggctttgccctacgtctgcctgctcatcgccatgctcttc
ttcatctacgccatcattggcatgcaggtgtttgggaacattaagctgaatgaggagact
cacattacgcagcacaacaacttcaagaccttctctggtgctctgatgctgctgttcagg
agtgccacaggggagtcatggcaggagatcatgttgtcgtgtctggggggacagaagtgt
gagacggacacctcgcttcccccagcagtaccgacgtctgaccaggaggggggctgtggc
tccgacttcgcctatttctactttgtctcgttcatcttcttcagctcattcctgatgctg
aacctgtttgtggctgtaatcatggataactttgagtacctgacgagagactcgtccatc
ttgggtcctcaccacctggatgagtttgtccggatctggggggagtatgaccgtgctgcc
tgtggtcgtatccattacaatgacatgtatgagatgttgaccaacatgtcgccacctcta
ggcctgggcaagaaatgcccctccaagttggcatataagagactagtcctgatgaacatg
cctgtggacgatgacatgtccgttcacttcacctccaccctcatggccctcatccgcacc
gccctggaggtcaagatagccagaggaggggaggatagaaatcagatggacctggactta
cagaaggagatcggtgtcatctggcctcatctctctcagaagacgttggacgtgctggtt
cccattcagaaagccggtgacatgacaattgggaagatttatgccgccatgatgatcatg
gactattacaagcagagcaaggccaagaagctccgacagcaactggaggaacagaaacat
gctcctatgttccagcgtatggacgcctcctctctgcctccagaaatcctatgcaatgcc
aaatccctttcattcctcaggcacagtgccggatctgctctcaccagaggaggttttcta
gcactcagccctatctctccacaagagatgttcctgcagccgctgtcccactccagggag
gagaaggaggaggatgacggcgactatcgttcaccctaccacccctaccatcaccctcat
caccagcaccatcatttacaaacactggtgccagacgtagtggagtataatcaagtgatg
cagcaggccaggcaggacgcaacagttattaaatcacctcagcgcacagcatccatcaga
gcttcctccatgcccagactggctgttgatccactgcctgggatgtcagcagacagtaag
ctgataaagcgctccttctctaccatcggagaccagtgtgtgaacggcctctggcaggag
cagcactctctggagagagtcagtcctgatggctcatacaggcctcgtcagaggagctac
agaggtcctagagtcaaccacaaagaaacaagcagtcatgagagagggcgatctaaggaa
cggcgccacctactgtctcctgacgtgtcccgctgcaactctgaggagcgcagccacgat
ccatcatgtgaaaggacacggtcccgttcacctagcgaaggacgcacacacaccttacag
agacaggtaaacacaacaggcagccctgttcattcagcctcagactccggcactcctcgt
aatcggcgccagctgccacagacaccctcccggcctcggccattcatctcctactcccct
ctggtctgccaagcccacaactctccagcaccaacagcctcctctgagggacagacccag
cctcaggatggcgctggtggctccactgagaacttgtggagggctgataaggagggtggc
cccctaactggaggtcaggggtcattcggaggacaggtgttaggaccgagcaacccatct
cctcaccgctacatctcagagccctacctcccattccatgatgacggcagcggtggagag
gcaggagacgggcaggagacccttacttttgagactgccatagcaaccagcctaggacgg
gccaacgccataagctccgctcctcagctcagacactcctggcaggttcctaatggtcat
ttccgaaagcacttgggccaagccagtccagctcaagccaaggagctgctaagtgacaca
gacgaggacgaccgctgctaa
DBGET
integrated database retrieval system
