Etheostoma spectabile (orangethroat darter): 116695492
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Entry
116695492 CDS
T08457
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116695492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116695492
03036 Chromosome and associated proteins [BR:
esp03036
]
116695492
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116695492
Coactivators
SAGA/TFTC/STAGA complex
116695492
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116695492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF3106
Motif
Other DBs
NCBI-GeneID:
116695492
NCBI-ProteinID:
XP_032381680
LinkDB
All DBs
Position
9:complement(30934914..30951864)
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AA seq
708 aa
AA seq
DB search
MATNKVVLEAPKLESSGAAGAGDTSNKLQVLQVPAKCGTIAAVQPTATAAGGSKSDCVSA
PLPKVLSTGHGPQPPSCTVAVVAGRQTSSPSVMVVSKVVTPGRVSATSQPQVTQAALSQV
APMKQTPTPGRTVVITVPRAAGAQTVTVAPRLPHAASPQLPTNIQIPAGMMLIRSDSGQL
MLVSQQALAQAQQGQRGVGGQGPRILVPQVSAASGNKSNEKVTVIRMAAPPSFQPAPVQK
TAVVKVIGVAHKPAVVPPLSAVSEQGSQHRIQPVVTETKKEPLTTISQATLDSVKKCKNF
LVTLIKLASSDSRSANMANNVRGLVRSLLEGKLEAEEFTEQLYRELKSTPQPCLVPFLKK
SLPAVRRLTADPQLFIQQASARNLSTQSSTMKQSSTDTGQNLNANQQVSPQQPRGVTVRV
TSAQSTNYTYKISRPPPKPTVVPSGKPFTGTFSVKQPFAQEPPRSTKFAFSSGSYREDDD
INDVASMAGVNLKEENARILTSVVGSVVQSCHDQPFLSPNPMLCRILRTGQALGVTEVAP
EVVALVSHATQECLRGLLEKLSVMAEHRKPALKEDPWHVKVSDVRSQLRFLEEVESLKKK
RKDEEERERLLRLARSRSHTEDPEQQQLKQRAKEFQQIEAAQLQQREANLTALAAIGPRK
KRPLEQSGGPVTLLPRQRVTRVMLRDLLLCMEQDHFLSHSLTLYKAML
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaataaagtggttcttgaagccccaaagctggagtccagcggggcagcaggg
gctggagacacctctaataaactccaggtattacaggtcccagccaaatgtggaaccatc
gctgccgtgcaacccacagccactgctgcaggaggctcaaagagtgactgtgtctctgcc
cccctgcctaaagtcctatccactggccatggcccccaacctccttcctgtacagttgca
gttgttgcagggcgtcagacctcctctccttctgtcatggtggtatcaaaggtggtcacc
ccaggacgagtgtctgctaccagccaaccacaggtaacacaagcagctttgagccaggtg
gccccaatgaaacagacccccaccccaggacggacagtggtgataactgtacccagggca
gcaggggcacagacagtcactgtggcccctcggctgccccacgctgcttccccacagctc
ccaaccaatatccagataccagcaggtatgatgttgatccgcagtgacagtggtcagctg
atgctggtatcccagcaggctttggcacaggctcagcagggacagagaggcgttggtggt
caagggcctagaatccttgtcccacaggtatctgcagcatctggaaataaaagtaacgag
aaggtgacagtgatcaggatggccgcccctcccagtttccagcctgcaccagtccagaag
accgctgtggtaaaggtgattggtgtagctcacaaaccagctgtagtcccgcccctcagt
gctgtgtctgaacaggggagccagcatcgcattcaaccagttgtcacggaaaccaaaaag
gaacccctaaccacaattagtcaggcgaccctggatagtgtgaagaagtgcaagaacttc
ctggtgactctgatcaagctggcctccagtgactccaggtccgccaacatggccaacaac
gtccgaggactggtccggagtctgctggaagggaagctagaagcggaggagtttacagaa
cagctgtatcgagagttgaagtcgactccacagccctgcttggtgcctttcctcaagaaa
agtcttcctgcagtgcgccgccttactgcagacccccagttatttatccaacaggcttca
gcccgaaacctcagcactcagtcttccaccatgaagcagtccagcactgacacaggacaa
aacctcaatgccaaccagcaggttagcccccagcagcctcgaggagtgactgtgagagtg
acatcagcccagtctacaaactacacctataagatcagcagacccccacctaaacccact
gtggtcccgtcaggaaaacccttcactggaaccttttcagtgaagcagcctttcgctcag
gagccacctcgttccaccaaatttgcattcagttcaggatcctacagggaagatgatgac
attaatgatgtcgcctccatggctggagtcaacctgaaggaggagaatgcccggatcttg
accagcgtggttggctctgtggtgcagtcgtgtcacgaccagcccttcctctcccctaac
ccaatgctctgccgaatcctccgtacaggacaggcattgggagtaacggaggtcgctcca
gaagtggtagctctggtttctcatgccacgcaggagtgtctccgtgggctgctggagaag
ctcagtgtgatggcagaacaccgcaagccagccctgaaggaagacccgtggcatgtcaaa
gtgagtgatgtacgctcccagcttcgcttccttgaggaagtggagagtttgaaaaagaag
aggaaagatgaagaagagagagagagactgctgcgtctggccagaagtcgctcacacacc
gaggatccagagcagcagcagctcaagcaaagagccaaagagttccaacaaatagaagca
gctcagctgcagcagagagaggccaacctcacggctctggccgccatcgggcctcgcaag
aagagacctctggagcagagtggaggcccggtgactctgctgcccagacagagagtgact
cgggtcatgctgagggatctgttgctgtgtatggagcaggaccacttcctgtcccactct
ctcactctgtacaaagccatgctctga
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