Etheostoma spectabile (orangethroat darter): 116695544
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Entry
116695544 CDS
T08457
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116695544 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116695544 (sh3rf1)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116695544 (sh3rf1)
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116695544 (sh3rf1)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116695544 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-rbx1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116695544
NCBI-ProteinID:
XP_032381757
LinkDB
All DBs
Position
9:complement(23080827..23110974)
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AA seq
856 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPGAPVCTNGTSGAVARAHNSGTRDQGTPGAQPQRAQ
AKSTLVRGVPQLPCAKALYNYDGKEPGDLKFSKGDVIILRRQVDENWYHGEMGGVHGFFP
TNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDVLTVIRRVDENWAEGMLGD
KIGIFPISYVEFNSAARQLIELDKPSDSSGDSGEGASSGPQSNGAQRAGEKKNSKKRHSF
TSLTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSCSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPSETSYTSITVDALPPPPPPPPQSSIDGAAYSLAAGQRPSP
TISDHSGRQRPTVYVAMFPYAPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTASGSSQPKVPMSLCTQAGRGVTIVSPSSAALGAIVPGPDFNKAIAVSSS
AVPANSQPAVVVTAAQTATGQQPKIPLHVSSQMTVNQARNAVRTAAGHSQDRPTAAVTPI
QSATPVTYLPHLTVCPQPSSNPAQCCSRAGVAMGCAAASLTPPNVSAASLEGDALRPVAV
FTVPGSGNSSALNSTSNNAALACRLDKDIKREKKGLLKMLSNKKKSRPSPPSSPTLEAEQ
AAAGEVLHGAVGPDTSPPSGSVSCLEPETAVAAFSSSSAPESSHRKSSPLDGCAPIAPPP
RQPCSSLLSQQHDARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKREDGWFKGTLQ
RNGRTGLFPGSFVDSI
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcagtattgttggatttgcttgagtgccctgtttgtctagagcgactggat
gcttcggcgaaggttcttccctgtcagcacaccttctgccgcagatgtctccaaggcatc
ctaggctcacgtggagagttgcgctgcccagagtgccgcacgttggtggagtgtgctgtt
gatgaactccccagcaacatccttcttgtgcgcctgttggatggcatcaagcagaggcct
cgaagggctggtcctggggctccagtctgcacaaatggtacgtctggagccgtggccaga
gcacacaacagtggaaccagggaccagggcaccccaggagcacaaccccagcgagctcag
gctaagagcactcttgtacggggtgtaccccagctcccttgtgccaaagccctctacaac
tacgatggcaaggaaccaggagacctcaagttcagcaagggtgacgttatcatcctgcgc
cggcaagtggatgagaactggtaccacggggagatgggtggagtccatggcttcttcccc
actaacttcgtccaggtcatcaagccgctgccacaaccaccacctcagtgcaaagctctc
tatgactttgagctaaaagacaaggaggcagacaaggactgtctgcccttctccaaggat
gatgtcctgactgtgatccgcagagtggatgaaaactgggcagagggaatgctgggagat
aaaattggaattttccccatctcatatgttgagttcaactcggcagctcgtcaacttata
gagttggacaagccgtcagactccagtggagactctggtgagggggcctcctcggggccc
cagagcaatggtgcccagcgtgcaggggaaaagaagaacagcaaaaagcgacattccttc
acctctctcaccatgtcccacaaacccatgctagctcctcccccccagcgccactccatg
gaaatcagtgggcctgtcctcatcagctccagcaaccccacagcagctgcccgaattgga
gagatcagcggggggctttcctgcagcgcaccttcacaggtacacatttgcacaactgga
ctaatcgtgaccccaccccctagtagtcctgttaccacagcaacggtcttcacatttccc
tcggagacgagctacacttccattactgtggatgctctcccaccacccccacctcctccc
ccacagtcctccattgatggcgcagcatattcattggctgccggacagagaccctccccc
accataagcgaccatagtgggagacaaagacccacagtctatgtggccatgttcccctat
gctccccgtaaggaggacgagctggaactaaggaagggagagatgtttttagtgctggaa
cgctgtcaggatggctggttcaagggcacctcaatgcacacgggcaagattggagtcttc
cctgggaactacatgagcccagtcagcaggacagcatcggggagcagccagcccaaagtg
cccatgagtctgtgcactcaggcaggtagaggggtcaccatcgtcagcccctcttctgca
gcccttggagccattgttccaggtcccgattttaacaaagccatcgccgtgtcctccagc
gctgtacctgcaaactcccaacctgcagttgtggtaacagcagcgcagacagccacaggt
caacagccaaaaatccctctgcatgtcagctcccagatgaccgtgaatcaggctcgcaat
gcggtcaggacagctgcgggccacagtcaggaccggcccacagcagccgtgacacccatc
cagtctgcaacacctgtgacctatctcccacaccttacagtgtgcccgcagccttcctcc
aatcctgctcagtgctgttcccgggctggagtggcaatgggctgtgccgctgcgtctctg
accccacccaatgtcagtgctgcatctttggagggtgatgctttgagacctgtagctgtc
ttcactgtccccggctctgggaacagctctgctctcaattccacatctaacaacgcagct
ctcgcttgccgactggacaaggacatcaagagagaaaagaaaggtcttctgaagatgttg
tccaataagaagaagtctcgtccttcaccaccctcctctcctaccctggaggcggaacaa
gctgctgcaggagaggtgctacatggcgctgtgggccctgacacctcccctccctccggc
tctgtcagctgcctcgagcccgaaactgctgttgctgccttttcatcctcctctgcacca
gagtcctcccatcggaagagcagtccccttgatggatgtgcacctattgctcctcctcct
cgccagccgtgctcctctctcttatctcaacaacacgatgcacggcccatcatatgtgag
aggtacagagtggtggtatcatatcctccccagagcgaggcagagctggaacttaaggag
ggcgacattgtgtttgttcacaggaagagggaggacggctggttcaaaggcacactgcag
cggaacggcaggaccggattgttccccggcagttttgtagacagcatctaa
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