Etheostoma spectabile (orangethroat darter): 116695618
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Entry
116695618 CDS
T08457
Symbol
fip1l1
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116695618 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116695618 (fip1l1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116695618 (fip1l1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
116695618
NCBI-ProteinID:
XP_032381910
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Position
9:28291344..28323299
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AA seq
441 aa
AA seq
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MSSSESDSKDVTEDSDEGQIYQLIYDMIIRDDKEEEKDVVQIPSSSEDTPVHLKTDAEWS
AHASAVCSNAPLSDGSEDEATHNTTHARQMDQEAGNTKALDTDALDNIPGIPAPTASEEK
PWRKAGADLSDYFNFGFDEESWNTYSKKQSKIRKANRKLCTKVMGQKEKESSPAPPSSDN
PSTILTSRQTNAATNADKGRRRSRVRRSRRXSDGENHSQVTTEMSPKEDRFTSYPSSPLN
FNSLFAYVPPPPFLFRPGPLSASRLAALDGGSSKGVDDPSTSGHPCSSGVSSFIPRSMST
KAGGIDTATECNKRKEKREKDRDRSREHGRDKDTTTGRNRDRGSCSSSHSAEERTRHRDT
TERGHGRHSLGEKEARHGERRHRDDSEGWQKSSRSSSSRRDRGEDRDSQSRHKHRKAKRN
RKDKETKKMSSTDQXRKLKCD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcggagtcagactccaaagatgtcaccgaagatagcgacgagggacaaata
tatcaattgatttatgacatgatcatcagagatgacaaggaggaagaaaaggacgtggtt
caaatcccgtccagctctgaggacacaccggtgcatctgaaaactgatgctgagtggagc
gcacacgcatctgcggtgtgctctaacgcgcctcttagtgatggctcagaggacgaagcg
acacacaacaccacccacgcaagacaaatggaccaggaagctgggaatacaaaggcacta
gacacggatgcattggacaatatcccaggaatcccagcaccaacggcttcagaggaaaag
ccatggaggaaagctggtgctgacctctcagattactttaactttggttttgatgaagag
agctggaacacctactctaagaaacagtcaaaaatccgtaaagctaatagaaaactatgc
actaaagtcatgggccagaaggaaaaggagtcttctccggctcctccttcgtcagacaac
ccctctactatactaacgtccagacagacaaatgctgccactaatgcagataaaggacga
cgaagatccagagtaagaaggagccgacggntcagtgatggagaaaaccattctcaggtg
actactgagatgtcccccaaggaggatagatttacttcttatccgtcctctccattgaac
ttcaattctctatttgcatatgtccctccaccacctttccttttccgaccaggacccctg
tctgcctcccggcttgctgctttggatggtggatcctccaaaggcgttgatgacccctca
acttcagggcacccatgttcatcaggtgtatcatcgtttatcccaaggagtatgtctacc
aaagctggagggattgacactgccacggaatgcaacaaacggaaggaaaagcgtgaaaag
gacagagacagatccagagagcacggccgtgataaagacactactacaggcagaaatagg
gacagggggagctgttcctcttcacacagtgctgaggagcgaacaagacacagggacacc
acggagcgagggcacggacgccacagtttgggggaaaaggaagcacggcacggagagagg
aggcacagagacgacagcgaaggatggcagaaatcatcacgcagcagcagtagtaggagg
gacagaggtgaggacagagacagtcagagtagacacaaacacaggaaggccaaaagaaat
aggaaggacaaggagaccaagaagatgtcctctactgaccagtagaggaaattaaaatgt
gactga
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