Etheostoma spectabile (orangethroat darter): 116695737
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Entry
116695737 CDS
T08457
Name
(RefSeq) retinoic acid receptor RXR-gamma-B-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03320
PPAR signaling pathway
esp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116695737
03320 PPAR signaling pathway
116695737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116695737
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
esp03310
]
116695737
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116695737
Nuclear receptors [BR:
esp03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116695737
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
116695737
NCBI-ProteinID:
XP_032382066
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Position
9:complement(35013464..35046300)
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AA seq
474 aa
AA seq
DB search
MRWDAEQHPTLGNRRNNSHSMDSNDPYLHLNSGPMTHTHSPPMGGMVGHPSVISTSRPLL
SPMSGLGSPMNGLASPYPVITSSLGSPSISLPSTPNMNFGTLGSPQMNMNSVSSSEDIKP
PPGLQNLGNINYQCTSPGGMSKHICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYT
CRDMKECLIDKRQRNRCQYCRYQKCLAMGMKREGVCAAVQEERQRGRERGENEVESTSSF
NEEMPVDKILDAELAVEPKTETSYNDGSPSNSTNDPVTNICQAADKQLFTLVEWAKRIPH
FSELPLDDQVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDR
VLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSSPPEVEALREKVYASLESYTKQKY
PDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgggatgcggagcagcacccgactctaggaaatcgacgcaacaactcgcacagt
atggacagtaatgatccgtatttacacctcaactcggggccaatgacccacacccactct
cctcccatgggtggcatggtcggccacccgtcagtcatcagcacctcaaggcccttactg
tcccccatgtctggcttgggctcgccaatgaacggcctggcctcaccctacccagtcatt
acatcttctctgggctcgccctctatatcattgccatccacgcccaacatgaactttgga
acactcggcagtccacagatgaacatgaacagtgttagcagctcggaggacatcaagcct
ccgccgggcctacagaacctgggaaacatcaactaccagtgtacgagccccgggggaatg
tcaaagcacatctgctccatttgcggggaccgctcctcaggaaagcactacggtgtgtac
agctgtgagggatgcaagggcttcttcaagaggaccgtacgtaaagatcttacctacacg
tgtcgagacatgaaggagtgcttgattgacaagcgccagcgaaaccgctgccaatactgt
cgctaccagaagtgcctggccatgggcatgaagagagaaggtgtgtgtgcagcggtgcag
gaagagaggcagcgaggaagggagcgaggggagaacgaggtggaatctaccagcagtttc
aacgaggaaatgcccgtggacaagatcctggatgctgagctggctgtggagcccaaaaca
gagacgtcgtacaacgacggcagccccagcaactcaaccaatgaccctgtcaccaatatc
tgccaagcagcagacaagcagctcttcacattggtggaatgggccaaaaggatcccacac
ttctccgaactccccctggatgaccaggtcatcctactacgagcaggctggaacgagctt
cttatcgcatcattctcgcatcgctccgtcacggtaaaagatggcatcctgttggcgaca
ggcctccacgtccacagaagcagcgcccacagtgcgggagtgggctccatcttcgataga
gtcctgacagagttggtatccaaaatgaaagatatgcaaatggataagacggagcttggc
tgcctgcgagccatcgtccttttcaacccagatgcaaaaggtctttcaagcccacccgag
gtcgaggcgctgagggaaaaagtctacgcctcattggagtcgtacaccaaacagaaatac
ccagaccagcctggcaggtttgccaagctgctgctccgcctgcccgccctgcgctccatc
ggcctcaagtgtctggagcatctgttcttcttcaagctgatcggggacacgcctatcgac
accttcctgatggagatgctggaggctccgcatcagattacatga
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