Etheostoma spectabile (orangethroat darter): 116695878
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Entry
116695878 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116695878
04121 Ubiquitin system [BR:
esp04121
]
116695878
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116695878
Membrane trafficking [BR:
esp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116695878
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116695878
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
FAR1_N
zf-Nse
HypA
zf-RING-like
zf-RING_16
DUF8608
zf-RING_Vps41
DZR
Zn_ribbon_6
DZR_2
C1_2
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
116695878
NCBI-ProteinID:
XP_032382292
LinkDB
All DBs
Position
9:complement(37294253..37301911)
Genome browser
AA seq
319 aa
AA seq
DB search
MAEAPLWPSRFFCHRCSAEISPRIPEYTCPRCESGFIEELLEERSADNGSTSSISSGPQN
QQPFENADQHLFTFPSGYGQFALGVFDDRFNFGSGLGTEDNRDAENRRERETASRQRYGA
RQPRSRHGSRRQAGRXEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGVLHSSPMDYAWG
ANGLDAIITQLLNQFENTGPPPADGDKIKTLPTVQITAEHVASGLECPVCKEDYTVGENV
RQLPCNHMFHNDCIVPWLEQHDTCPVCRKSLSGQNTATNPPELSGMNFTSSPSSSSSSSS
SSTPQSSSSTSNENSTDNS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccctatggcccagccggttcttctgtcacagatgctccgcagagatt
agtcctcggattcccgagtacacgtgtccaagatgtgagtcagggtttattgaggaactg
ctggaggagagaagtgctgacaatggctccacgtctagcatctccagcgggccccagaac
cagcaaccatttgagaatgcggaccagcacttgtttacattcccctcgggatatggtcag
tttgccctcggtgtctttgacgaccgcttcaacttcgggtctggactgggaacagaggat
aacagggatgccgaaaacaggcgagaaagggaaacggcatcacggcaacgatatggtgcc
aggcaaccgagaagtcgtcatggttcaaggcgacaagcagggaganctgagggagttccc
actttagaaggaatcattcagcagctagtgaatggaataattgcgcccactgcaatgcca
aatatcggtgttggaccctggggtgttctgcactcaagtcctatggattatgcctggggc
gctaatggactagatgcgattataactcagttactaaaccagtttgagaacacgggacct
ccacctgctgatggggataaaataaaaactcttcctacagtacaaattacagctgagcat
gttgcttcaggactggaatgtccagtgtgtaaagaagattacactgttggagaaaatgtg
aggcagctcccatgcaatcacatgttccacaatgactgcatcgtaccctggctggagcag
catgacacttgtccagtgtgcaggaaaagcttgagtgggcagaacacggcaacaaaccct
ccagaactttcagggatgaactttacctcctccccttcctcctcctcgtcctcttcatct
tcctctacccctcagtcctcaagttcgaccagcaatgagaactccactgataactcttag
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