Etheostoma spectabile (orangethroat darter): 116695991
Help
Entry
116695991 CDS
T08457
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116695991 (htt)
04131 Membrane trafficking [BR:
esp04131
]
116695991 (htt)
03029 Mitochondrial biogenesis [BR:
esp03029
]
116695991 (htt)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116695991 (htt)
Membrane trafficking [BR:
esp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116695991 (htt)
Mitochondrial biogenesis [BR:
esp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
116695991 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_ECM29
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
116695991
NCBI-ProteinID:
XP_032382480
LinkDB
All DBs
Position
2:complement(5795593..5829644)
Genome browser
AA seq
3197 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPPTAEELVQRQKKEQATTKKDRVTHCLTICENIVAQSL
SPGSRTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELY
KEIKKNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLSRITKRQEETVQETLAAA
MPKIMAALGNFANDGEIKVLLKSFVANLKSSSPTIRRTAASSAVSVCQHSRRSSYFYTWL
LNVLLGLLIPVDEEHLSHLILGVLLTLRYLMPLLQQQVNTTSLKGSFGVMRKEADVQPTP
EQLLQVYELTLHYTQHWDHNVVTAALELLQQMFRTPPPELLHMLITAGSILHGTVFRQDT
ESRARSSSILELIAGGASSCSPLVLRKPRGKMLSGEEDGLEDDAERTEVTAGAFTAAVVG
EDGSSAAQVDIITEQPRSSQHTLQPGDSVDLSASSEQGGGGTSASDTPESPNDNEEEMLS
RSSSGGANITPETADYTTPEMEGGPLGVGGTLLGTNDRSLPPSDSSQTTTEGPDSAVTPS
DVAELVLDGSESQYSGMQIGKLQDEEEEGAAPSSQEEPPEPFLQSALALSKPHLFDGRGH
NRQGSDSSVDRFITKDEPAEPEPDNKPSRIKGPIGHYTDQGVEPLVHCVRLLAASFLLTG
RKNGLTPDKEVRVSVKALAVSCVGAAAALHPEAFFNSLYLEPLDGIPVEEQQYITDILGL
IDHGDPQIRGATAILCAAIIQAALTKTRYNIHTWLASVQSATGNPLSLVDLVPLLQKTLK
DESSVTCKMACSAVRHCIMTVCSSTLSELGLQLLINLLALKDSSYWLVRTELLETLAEMD
FRLVNFLERKTETLHKGDHHYTGRLRLQDRVLNDVVICLLGDDDPRVRHVAASAVSRLVS
RLFYDCDQGQVDPVVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYNLSNNVSDV
TIENNLSRVVTAVSHAFTSSTSRALTFGCCEALSLLALNFPVCTWSTGWHCGYVSSSSSF
SSRSSLNRSRGRALSVSQPCSAPASSTSSSAPDTERRTLTVGMANMVLSLLSSAWFPLDL
SSHQDALLLSGNLLAAVAPKCMRNPWAGEEEGTSGSTNTSGGPNKMEEPWAGLSERSLVA
MLEQLFSHLLKILNICAHVLDDTPPGPAVKATLPSLSNTPSLSPIRRKGKEKDAEPSAAP
MSPKKSNEVNTGRPADSTGSTAVNKSTTLGNFYHLPPYLKLYDVLKATHANYKVTLDLHS
SQEKFGGFLRATLDVLSQLLELATLHDISKCVEEILGYLKSCFSREPTMATVCVQQLLKT
LFGTNLASQCEGILSGPSRSQGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNM
VQAEQEHDTSGWFDVMQKASNQLRSNIANATRNRGDKNAIHNHIRLFEPLVIKALKQYTT
STSVALQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIF
FFLVLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKA
DAGKELDTQKEVVVSMLLRLVQHHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPLI
AKQQMHLDSPEALGVLNTLFETVAPSSLRPVDMLLKSMFTTPVTMASVATVQLWVSGILA
VLRVLISQSTEDIVLSRVHELSLTPHLLSCHTIRRLHQQSPSPCDPPTANELGIQEANGE
VEKALPEETFARFLLQLVGVLLDDISSRQVKVDITEQQHTFYCQQLGTLLMCLIHVFKSG
MFRRITAAASRLLKGEGGGGQTSTEAGLFYPLEGLNSMVQCLITTHPSLVLLWCQVLLII
DYTNYSWWAEVHQTPRRHSHSCTKLLSPHSSGEGEEEKPETRLAMVNREIVRRGALILFC
DYVCQNLHDSEHLTWLIVNHVRDLINLSHEPPVQDFISAVHRNTAASGLFIQAIQSRCDN
LSTPTMLKKTLQCLEGIHLSQSGSLLMLYVDKLLSTPFRVLARMVDTLACRRVEMLLAET
LQNSIAQLPVEELDRIQEYLQTSGLAQRHQRFYSLLDRFRATVADTSSPTPPVTSHPLDG
DPPPSPELVIADKEWYVALVKSQCCLRGDVSLLETTELLTKLPPTELFNIMSCKEFNLSL
LCPCLSMGMQRLARGQGALLLETALQVTLERLAGVTGSLPVPHQSFLPPAQPQPYWSQLA
EVYDEPSFYPRVLSLCRALSQYLLSVSQLPPSLHIPSDKEHLITIFTCTAAEVVAWHLLQ
NQLPLSVDLQWALSCLCLALQQPCVWNKLSTLEYTTHTCSLIYCLRLIIVAVAVSPGDQL
LHPEKKKKMKAERDAEGDEVDSAHADHLCEWQACEIMAELVDGLQSILALGHHRNSAFPA
FLTPTLRNIVISLSRLPLVNSYTRVPPLVWKLGWSPQPGGEYGTTLPEIPVDFLQEKDVF
REFLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQA
ITSLVLSAMTLPTAGNPAVSCLEQQPRNKSLKALETRFGRKLAVIRGEVEREIQALVSKR
DNVHTHHPYHAWDPVPSLSAASAAGTLISHEKLLLQINTEREMGNMDYKLGQVSIHSVWL
GNNITPLREEEWGEDEEDEADTPAPTSPPISPINSRKHRAGVDIHSCSQFLLELYSQWLI
PGSPSNRRTPTILVSEVVRSLLAVSDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLV
PAICKAAAVLGMDKAIAEPVCRLLETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLI
PTVSEYLLSNLRAIAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGAEFMAGVIQLCGVMV
SASEDSTPSVIYHCVLRGLERLLLSEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLML
TCMYTAVLASGSDVTGVRGQVDSGSAVAEAVGVTAGHVGFSSGKEKASPAGRPAHSDPQA
PDSESIIVAMERVSVLFDRIRKGLPSEARVVSRILPQFLDDFFPPQDVMNKVIGEFLSNL
QPYPQFMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSAST
SQWISALLPHVISRMGSSEVVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGSP
YYRLLGCLQSIHQDTSL
NT seq
9594 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaattgatgaaggcctttgagtctctgaagtcattccagcagcaa
cagggaccaccgaccgccgaggagcttgtacaaaggcagaaaaaggaacaggctaccaca
aagaaggaccgggtcacccactgcctgacaatatgtgaaaatattgtggctcagtctctg
agtcctgggagcagaacgtctccagagtttcagaaactgctgggtattgccatggagatg
ttcttgctctgcagtgatgacagcgaatcagatgtccgaatggtagccgatgagtgcctg
aacaaaatcatcaaagcactgatggactccaacctgcctagactgcagctggagctgtat
aaagaaataaaaaagaacggtgcctctcggagtttgagggcagctttgtggaggtttgct
gagcttgctcacctcattagacctcagaaatgcagaccctacctggttaacctgttgcca
tgcctctcccgaatcaccaagcgacaggaggagaccgtacaggagactctggctgctgca
atgcccaagatcatggccgccttgggtaactttgccaatgatggcgagatcaaggtgctg
ctgaagtcatttgtggccaacctgaagtccagctcccccaccatccgacggacagcagcc
agctcagccgtcagtgtgtgccaacactccagacgcagcagctacttctacacctggctc
ctaaatgtgctgctgggtctgctgattccagtggatgaggagcacctcagtcacctaatt
ctgggggtgctgttaacccttcgctacctgatgcctctgctgcagcagcaagtcaacacc
accagcctcaaaggaagctttggagtcatgaggaaggaggctgatgtacagccaacacct
gaacaactgctacaggtgtacgagctgaccttgcactacacacagcactgggatcacaat
gtggtcacggcagctctggagctcctgcagcagatgttcaggactcccccgccagagctt
ctgcacatgctcatcaccgcaggcagcattctacatggcaccgtgttccgccaggacact
gagagccgtgcacgctccagcagcatccttgagctcattgcaggtggagcttcttcctgc
agtccactcgttctcaggaaaccgagaggtaaaatgctttctggggaggaggatgggttg
gaggatgacgctgagagaacagaggtcactgctggtgccttcacagcggcagttgttggt
gaagatggctcctccgcagcccaggtggacatcatcacagagcagcctcgctcctcccag
cataccctgcagcctggagactcagtggacctcagtgcctcctcagagcagggtggaggc
gggacatctgcatcagacactcctgagtcacccaacgacaacgaggaggaaatgctgagt
cggagctccagcggtggtgccaacattactccagagacagctgactacactacaccagag
atggagggagggcctttaggtgtaggtgggactctgctaggcactaatgatcggtcactt
ccacccagcgactcttcccagaccaccacggagggaccagactccgctgtcaccccttcg
gacgtagcagaactggtgctggatggcagtgagagccagtactctgggatgcagatcggg
aaattacaggatgaagaagaggaaggagcagcaccttcctcccaagaagaacccccagaa
ccattcctacagtcagcactggctctgagcaagcctcatctctttgatggccgaggtcac
aaccggcagggttcagacagcagtgtggaccgcttcataacaaaggacgaacctgctgaa
cccgaacccgacaacaagccatcacgaataaagggtccaatcggacattatacagaccag
ggggtggagccactggtgcactgtgtaaggcttcttgcagcttcattcttactgacagga
agaaaaaatggtctgacccctgacaaggaggtgcgagtgagcgtgaaggctctggcagtc
agctgtgttggggcagcagcagcgctgcatcctgaagccttctttaattccctctacttg
gagccgctggacggcattccagtagaagagcagcagtatatcactgacatcctgggtctc
atcgaccatggggacccccagatcagaggggccacagccatcctctgtgcagccatcata
caagccgcactcaccaaaacacgttacaacatacacacttggctggccagtgttcagagt
gcaacaggtaaccctctgtccctggtggacttggtgcctttgctccagaaaactctgaaa
gatgaatcctccgtcacctgcaagatggcttgctctgcagtgaggcactgcatcatgact
gtgtgcagcagtaccctgagcgagctcggcctgcagttgctgataaaccttcttgctctg
aaggactcatcctattggcttgttcgcactgagctcttggagaccctggctgagatggac
ttccggttagttaatttcctggagaggaaaactgagactttgcacaaaggggatcatcac
tacactgggcggctgcggctacaggacagagtcctgaatgatgtggtcatctgtctgttg
ggagatgatgaccccagagtccgacacgtggcagcctctgctgtcagcaggctagtttcc
aggttgttctatgactgtgaccagggtcaagtggacccagtagtggctattgcccgggac
cagagttcagtctacctgcagctgctgatgcatgagacccaacccccctcccagttcaca
gttagtacaatcacaaggacgtacagaggatacaacttgtccaacaacgtgtctgatgtg
acaatcgagaacaatttgtccagagtcgtcactgccgtctcccatgctttcacctcctct
acctccagggcgctgacttttggctgctgtgaggccttgtccctcctggctttaaatttc
ccagtgtgcacttggagtacaggctggcactgtggctatgtcagctccagtagcagcttt
tcttcccgctctagtctcaatcgcagcaggggcagggccctcagtgtgtcacagccatgc
agtgctccagcctcttcaacctcctcgtctgcaccagacaccgagcgaaggactctaact
gtaggaatggccaacatggtcctctccttactttcttctgcttggtttccactggatctc
tcttcgcaccaggatgcacttttgctttctggcaatctgcttgctgctgtggctcctaaa
tgcatgcgcaacccctgggctggagaggaagagggcaccagtggtagcacaaacaccagt
ggaggcccaaataagatggaggaaccctgggcagggttgtctgagcgctccctggtggcc
atgttggagcaactcttctctcacctactaaagatcctcaacatctgtgcccatgtactg
gatgacacaccacctggaccagcggttaaggccaccctcccctccctgagcaacaccccc
tccctcagtcccatccggagaaaaggcaaggagaaggatgctgagcccagtgctgcccca
atgagcccaaagaaaagcaatgaggtcaacacaggcaggccagcagacagcactgggtca
acagctgtaaacaaatctaccactcttggcaacttctaccaccttccaccctacctcaag
ctctatgatgtcctcaaagctacacatgccaactacaaggtaacactggacctccacagt
agccaagagaagtttggaggtttcctgcgtgccactctagatgttctatcccagctcctg
gagctggccacactacatgacatcagcaagtgtgtggaggaaatcttgggctaccttaag
tcctgcttctccagggaaccaaccatggctacagtttgtgtacaacagctgttgaagacc
ctgtttggcaccaacctggcctctcagtgcgagggcattctgagtggacccagccgttcc
cagggcaaggctctccgtcttggatcgtccagtctgcgaccaggcctctaccactactgc
ttcatggcgccatacactcacttcactcaggctcttgccgatgccagtcttcgtaacatg
gtgcaggcagaacaggaacacgacacctctggatggtttgatgtgatgcaaaaggcttca
aaccaactgaggtccaatattgcaaatgcaacacgcaacagaggagacaagaatgccatc
cacaaccacattcgtctgtttgagccgctggtgatcaaagctttaaagcagtacactacc
agtacgtctgtggccctgcagagacaagtactggacctgctcgctcaacttgtgcagctt
agggtcaactactgcctgctggactcagatcaggtgttcataggctttgtcctgaagcag
tttgagtacattgaagtgggacagttcagagattcggaggccatcattcccaacatcttt
ttcttcctggttctgttgtcgtatgagcgttaccactccaagcagataatcagcatcccc
aagatcattcagctctgtgacggcatcatggcgagcggcaggaaagctgtcacacatgcc
atcccagccttgcagccaatagtccacgacctgtttgtgttgaggggctcaaacaaagca
gatgcaggcaaagagctggatacacagaaagaagtggtggtctccatgctgctcagactt
gtgcaacaccaccaggtattggagatgttcatccttgtactgcagcagtgtcacaaagag
aacgaggacaagtggaagagattgtccaggcagattgctgacgtcatacttcccttgatt
gctaaacagcagatgcacctggactctccggaggcattgggagtgttgaacactctgttt
gaaactgtggcgccctcctcactcagacctgtagacatgctgctcaagagtatgttcacc
accccggtcaccatggcatcagtagctacagtccagctatgggtgtctggtatcctggca
gtgctcagggtacttatctcccagtccactgaggacattgtcctgtcacgggtccacgaa
ctctccctcacccctcatctcctctcctgccacacaattcgtcgcctgcatcagcaaagc
ccctccccatgtgacccacccactgccaacgaacttggcatccaggaagctaatggcgag
gtagaaaaagccctgcctgaggaaacctttgccaggtttctgcttcagctggtaggagtg
ttgctggatgacatttcctccagacaggttaaagtggacattacagagcagcaacacact
ttctactgccagcagctgggcacactgctcatgtgtctcatacatgtcttcaaaagtggg
atgtttcgcaggatcacggctgcagcgagccgtctcctgaagggggagggaggaggtgga
cagacgagcacagaggccggactgttttaccccttagagggtctgaacagcatggtgcag
tgcctgatcaccacccacccctccctggtgctgctgtggtgccaggtcctcctcatcatc
gactacaccaactattcctggtgggctgaggtgcaccagacacccaggagacacagccac
tcgtgcacaaagctgctgagccctcactcctcaggggaaggagaagaggagaagcctgag
actcggttagctatggtcaaccgagagatcgtacgcaggggagccctcatcctcttctgt
gactatgtgtgtcagaaccttcatgactctgagcatctgacttggctgatcgtcaaccat
gtgcgtgacctcatcaacctttcccatgaacctccagtgcaagatttcattagtgctgtg
caccgcaacacagctgccagtggtctcttcatccaggccatccagtcccgctgtgacaac
ctcagtactcctaccatgttgaagaagactctgcagtgtttggaaggcatccacctgagt
cagtctggctccttgctgatgctgtatgtggacaagctgctcagtacacccttcagagtt
ctagctcgcatggtggacacactggcgtgtcgcagggtagagatgctgttggctgagaca
ctacagaacagtatagctcagctgcctgtggaggaactagacaggatccaggaatatctc
cagaccagtggcctggctcagaggcatcagaggttctactccctgctagaccggttcaga
gccactgtcgccgacaccagcagccccacacctcctgtgacatcacacccattagatggg
gatccaccaccttcccctgagctggtcattgcagataaggagtggtacgtggctctggtg
aagtctcagtgttgtcttcgtggagatgtttccctgttggagacgacagaactcctcacc
aaactaccccccactgaactctttaacatcatgagctgcaaggagttcaacctaagcctg
ctgtgcccatgcctaagtatgggcatgcagcgtttagcacggggtcagggggcgctcttg
ttggagactgccttgcaagtgaccctagagcggctcgcaggggtcaccgggtcacttcct
gtcccgcaccagtccttcctgccacccgcccagccacagccctactggagccaactggct
gaagtgtatgatgagccaagtttctaccccagggttttgtcgctctgcagagctctgtcc
cagtacctgctgagtgtaagccagctgcctccctcactacatatcccctctgacaaggag
cacctcatcaccattttcacctgcactgccgctgaggtggtagcatggcatctcctccag
aaccagttgcccctgagtgtggatcttcagtgggctctgtcgtgcctgtgtctggccctg
cagcaaccctgcgtctggaacaagctctccaccctagagtacactacacacacctgctct
ctaatctactgcctacgcctgattattgttgcagtggctgttagtcctggggaccagctt
ctgcatccagagaagaagaagaaaatgaaggcagagagagacgccgaaggagatgaagtg
gactcggcacatgccgaccacctgtgcgagtggcaagcatgtgagattatggcggagctg
gtggatggcctgcagagcatccttgctctgggtcaccatagaaacagtgcattccctgct
tttctcacaccaaccttacgtaacattgtcatcagtctgtcccgactgcctctggtcaac
agctacacccgagtacctccactggtttggaaactgggctggtcccctcagccaggagga
gagtatggcacaacgctgcctgagatccctgtcgacttcctgcaggaaaaagatgtcttc
agagagttcctctaccgcatcaacacactgggctggagcagcaggacgcagtttgaggag
acttgggccacactgctgggggtgctggtcacccaacccatcactatggaccaagaggag
gagacgcagcaggaggaggacttggagcgtacccagttgaatgtgttagcagtgcaggcc
atcaccagcctggtgctgagtgccatgaccctgcccactgctggcaaccctgcagtcagc
tgtctggaacagcagccgcgcaacaagagcctcaaagccctagaaacccggtttgggagg
aaacttgcagtgatcaggggcgaggtggagagagagattcaggctcttgtgtctaagaga
gacaatgttcatacacaccatccgtaccacgcctgggatcctgtaccctcgctatcggcg
gcctcagctgcaggcacgctgatcagccatgagaagctgctacttcagatcaacacggag
agggagatgggcaacatggactacaaactgggacaggtctccattcactcagtgtggtta
ggtaacaacattaccccactgagggaggaagagtggggtgaggatgaagaagatgaagca
gacactccagcgcccacctccccacccatctctcctatcaactctaggaagcatcgtgca
ggtgtggatattcattcatgttcccagtttctcctggagctctacagccagtggctgatc
cccggctccccaagtaacaggaggaccccgaccatcctcgtcagtgaagtggttcgatcg
ctgctggcggtgtcagaccttttcactgagcggaaccagtttgacatgatgttctctacc
ctgatggaactgcagaagctccacccgccagaggatgagatcctcaatcaatacctggtg
cctgccatctgcaaggctgctgctgttctgggcatggacaaggcaatagcagagcctgtg
tgtcgccttttggagaccaccctgcgcagcacccacctgcccagccgcatgggggctcta
catggagttctgtatgtgttggagtgtgacttgctggatgacactgccaaacaactcatc
cccactgtctcggagtatcttctgtccaacctcagggctatcgctcactgtgtgaacctg
cataaccagcagcatgtgttggtaatgtgcgcagtggctttctacatgatggagaactac
cctctggatgtaggagctgagtttatggctggagttatacagttgtgtggtgtgatggtg
tcggccagcgaggactccactccctccgtcatctatcactgtgtgctgcgcggtctggag
cgcctcctgttgtcagagcagttgtcacgtgtggacggagaagcgctggtcaaactcagc
gtggacagagtcaacatgccgtcgccacacagagccatggctgccctgggcctcatgctc
acctgcatgtacactgcggtgcttgcgtcgggttcagacgtgacaggggttagaggtcag
gttgactctggctctgccgtagcagaggcggtgggcgtcacggcaggtcatgttggtttc
tcctcaggcaaggagaaagccagccctgccggtcgccccgcccactctgaccctcaggcc
ccagacagcgagtcgatcattgttgccatggagagggtctctgtgctctttgacaggatc
cgcaaaggtttacccagcgaagctcgggtggtgtccaggattctgccccagtttctggac
gacttcttcccgccacaggacgtcatgaacaaggtcatcggagagtttctgtccaatctg
caaccttacccacaattcatggccactgtcgtctacaaggtctttcagacacttcatgca
actggccagtcttctatggtgcgagactgggtgctgctgtccttgtccaacttcacccag
cggacaccagtggccatggccatgtggagcctctcctgtttctttgtctccgcgtccacc
tcccagtggatctcagccctactgccacacgtgatcagccgtatgggctctagtgaggtg
gtggacgtcaacctgttctgtctggtggccatggacttctaccggcaccagattgacgag
gagctggaccgcagggccttccagtccgtctttgagactgtggcctctccaggcagccct
tattaccggctgctgggctgtctgcagtcaatccaccaggatacatcactctga
DBGET
integrated database retrieval system
