Etheostoma spectabile (orangethroat darter): 116696012
Help
Entry
116696012 CDS
T08457
Name
(RefSeq) thrombospondin-4-like
KO
K04659
thrombospondin 2/3/4/5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04145
Phagosome
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116696012
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116696012
09144 Cellular community - eukaryotes
04510 Focal adhesion
116696012
09142 Cell motility
04820 Cytoskeleton in muscle cells
116696012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116696012
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116696012
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116696012
Membrane trafficking [BR:
esp04131
]
Endocytosis
Phagocytosis
Opsonins
116696012
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116696012
Exosomal proteins of colorectal cancer cells
116696012
Exosomal proteins of bladder cancer cells
116696012
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116696012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
116696012
NCBI-ProteinID:
XP_032382540
LinkDB
All DBs
Position
9:15591929..15603562
Genome browser
AA seq
748 aa
AA seq
DB search
MLWFLVLNCVLCMGGHAAVGQRDGEIISQIKMTNLALAEIKELLKQEIKEIVFMKNTVME
CEACGMGGMQPRPSCVPNPCHPGVQCKETPQGTECGSCPDGMEGNGTHCTDVDECTVMPC
HMGVRCINTSPGFRCGTCPAGYTGPQVQGIGLAYATKNKQMCKDINECEGLNNGGCVENS
VCMNTPGSFRCGPCKTGYVGDQRRGCKPERACGNGQPNPCHASAECIVHREGKIECQCGV
GWAGNGYLCGADVDIDGFPDEKLACPEINCNKDNCLTVPNSGQEDADLDGIGDACDEDAD
GDGILNMQDNCVLVPNVDQRNVDEDDFGDACDNCRAVKNNDQKDTDVDKFGDECDEDIDG
DGILNHLDNCKRVPNADQKDRDGDKVGDACDSCPYVPNPDQTDVDNDLIGDPCDTNKDSD
GDGHQDSRDNCPAVINSSQLDTDKDGMGDECDDDDDNDGIPDLLPPGPDNCRLIPNPLQE
DSNGDGVGNICEKDFDNDTIVDTIDVCPENAEVTLTDFREYQTVVLDPEGDAQIDPNWVV
LNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVM
WKQVEQIYWQANPFRAVAEPGIQLKAVKSNTGPGENLRNALWHTGDTSDQVKLLWKDSRN
DGWKDKTSYRWFLQHRPADGYIRVRFFEGPQMVADTGVIIDATMRGGRLGVFCFSQENII
WANLRYRCNDTLPEDFDTYRDQQVQLVA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggtttctggtgctcaactgtgtgctctgcatgggaggacacgctgcagtggga
cagagagatggagaaattatcagtcagattaaaatgacgaaccttgcgctggctgagatt
aaagagcttctgaaacaagagataaaagaaatagttttcatgaagaacacagtgatggag
tgtgaagcctgtgggatgggaggaatgcagcctcgtccctcctgtgtgcccaacccctgc
cacccaggggtgcagtgtaaggagacacctcagggtacagagtgtggatcctgtcctgat
ggtatggagggcaacggtacccactgcactgatgtggacgagtgtactgtgatgccgtgt
cacatgggcgtgcgctgcataaacacgtccccaggtttccggtgcggtacctgtcctgcg
ggatacaccggcccccaggtccagggcatcggccttgcctacgccaccaaaaacaaacag
atgtgcaaagatatcaatgagtgtgaaggcctcaacaatggcggctgtgtggagaactct
gtctgtatgaacacccctggctcgttcaggtgtggtccctgtaagacgggctacgttggg
gaccagcggcgtggctgtaagccggagagagcctgtggaaacggccaacccaacccctgt
cacgccagtgctgagtgcattgtccatcgagagggtaaaattgagtgtcagtgcggagtg
ggatgggctggcaatggctacctctgcggggctgacgttgacatcgatggtttccccgat
gagaagctggcctgtcctgagattaactgcaacaaggataattgtctcactgttcccaac
tctggacaagaagatgctgaccttgatggaattggagacgcctgtgatgaggatgcagat
ggggatgggatcctgaacatgcaggataactgcgtgttggtgcctaacgtggaccagagg
aacgttgatgaggacgactttggcgacgcctgcgacaactgtcgcgccgtcaaaaacaac
gaccaaaaagacacagatgtagacaaattcggtgatgagtgtgatgaagacatagatggg
gatggaatcctcaatcatctggataactgcaaaagggttcccaacgctgaccagaaagat
cgtgatggagacaaagtgggagacgcctgtgacagctgtccttatgttccaaaccctgac
cagacggatgtggacaatgacttgattggagacccctgtgacaccaacaaggacagtgac
ggagacggtcaccaagactcccgggacaactgtccagccgtcatcaacagctcccagctg
gacaccgacaaggacggcatgggagatgagtgtgatgatgacgatgacaacgatggcatc
ccagacctgctgccacctggtccggataactgccgtctgatccctaaccctctgcaggag
gactctaacggtgatggtgtgggcaacatatgcgagaaggattttgacaacgatactatt
gttgacaccattgatgtttgtccggaaaatgctgaagtcaccctcaccgatttcagggag
taccagaccgttgttttagacccggagggagatgcacagattgaccccaactgggtggtg
ctgaaccagggaagagagattgtgcagactatgaacagtgatcctgggttggctgttggt
tacacagctttcagcggtgtggattttgaagggacgtttcatgttaacacagtaacggac
gatgactacgcaggatttatcttcgggtaccaggacagctccagtttctacgtagtgatg
tggaagcaggtggaacagatctactggcaggcaaacccatttagagccgttgcagaacca
ggcatccaactgaaggcagtcaagtcaaacacgggtccaggtgaaaacctgaggaatgcc
ctgtggcacaccggtgacaccagtgaccaggtcaaactcctgtggaaagattctcgcaat
gatggctggaaggacaagacttcttaccgctggttcctccaacaccgacccgcagacggc
tacatcagagttcgtttctttgagggtcctcagatggtggcggacacaggcgtcatcata
gacgccacaatgagaggaggtcgactgggagtcttctgcttctcccaggagaacatcatc
tgggccaacctgcgttatcgctgcaacgacactcttcctgaagactttgacacctacaga
gaccagcaggtccagctggtggcctga
DBGET
integrated database retrieval system
