Etheostoma spectabile (orangethroat darter): 116696034
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Entry
116696034 CDS
T08457
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04810
Regulation of actin cytoskeleton
esp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116696034 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116696034 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116696034 (cyfip1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116696034 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
116696034 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
116696034
NCBI-ProteinID:
XP_032382588
LinkDB
All DBs
Position
9:24135544..24174261
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AA seq
1253 aa
AA seq
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MTSTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSIMFQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNVMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHIERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCVDYYEDKMYLTPNEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSISSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDVEYRKLFDLALQGIQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTCEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGREPPNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPTILDMEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSANYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFVYYKILAGS
LLLDKRLRADCKNQGANIPWPSSNRYETLLKQRHVQLLGRSIDLNRLITQRISAALYKSL
DLAINRFESEDLTSIMELEGLLDINRMTHKLLSKYLTLDSLDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKTLNLAYSS
IFNTYRNFVGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAMLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIISLLGQHRRFDILDFSYHLLKVQKHDGKDEVIKSVP
LKKMVDRIRKFQILNNEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccacagtgactttagaagatgccctgtccaacgtggacctgctggaggagctg
ccccttccagaccagcagccatgcatcgagcccctcccctcctccatcatgttccagccc
aacttcaacaccaactttgaggaccgaaatgcgtttgtcaccggcatcgccagatacatt
gagcaggccacggtccactccagcatgaacgtgatgttggaggaggggcaggagtacgcc
atcatgctctacacctggaggagctgctcgcgtgcgataccacaggtgaaatgcaacgaa
cagcccaacagagtggagatctacgagaagaccgtggaggtcctagagccggaagtcacc
aagctgatgaatttcatgtacttccagcgcacagcaatcgaccgtttctgcggagaagtc
cgtcgtctctgtcacatcgagcgcagaaaagactttgtctccgaggcgtacctgctaacc
ctcggaaagttcatcaacatgttcgctgtgctggatgagctgaagaacatgaaatgcagc
gtgaagaacgaccactccgcctacaaacgcgccgcccagttcctcagaaaaatgtctgag
ccttcatcgatccaggagtctcagaacctgtccatgttcctggcaaaccacaacaaaatc
acccagtctttgcagcagcagctggaagtgattaatggatatgaggagctgctggcagat
atcgttaacctgtgtgtcgactactacgaggacaagatgtacctcactcccaatgagaaa
cacatgctgctcaaagtgatggggttcggcttgtacctcatggatggaaacagcagcaac
atctacaagctagatgccaagaagaggataaacctgaccaagatcgacaagtttttcaag
caactgcaggtggtccctctgtttggcgacatgcagatcgagttgtcccgttacatcaag
accagcgctcactttgaggagaacaaatccaggtggacttgcacgtctatatccagcagc
ccccagtacaacatctgtgagcagatgattcagatccgcgaggatcacatgcgcttcatc
tcggagctggctcgctatagcaacagcgaggtggtgactggatcagggcgtcaggaagcc
caaaagactgatgttgagtacaggaagctgtttgacttggccctgcagggcatccagctg
ctctcccagtggagcgctcacgtcatggaagtgtactcctggaaactggttcacccaacc
gacaagtactccaacaaagagtgccccgacaacgctgaggagtacgagagagccaccaga
tacaactacacatgcgaggagaagtttgctcttgtggaggtgatggcaatgataaaggga
ctgcaggtgttgatgggacgcatggagagtgtgttcaatcacgccatccgccacaccatc
tactcggctctgcaggactttgctcaggtcactttgcgcgaaccactgcgacaagccatc
aagaagaagaagaatgtcatccagagcgtcctccaggccatccggaagaccgtgtgtgac
tgggagacgggccgggagccacccaacgaccctgccctccggggagaaaaagatcccaag
ggtggttttgatatcaaggttcctcgccgagcagtggggccctccagtacacagctctac
atggtgagaactatgcttgagtctctcattgctgacaaaagtggctctaagaagactctg
cgcagcagtctggatggccccaccatcctggacatggagaagttccaccgcgagtccttc
ttctacacccatctgctgaacttcagtgagaccttgcagcagtgttgtgacctttcccag
ctctggttcagggagttcttcctggagctcacaatgggccgcagaatccagttccccatc
gagatgtccatgccctggatcctcaccgaccacatcctggagaccaaggaagcatccatg
atggagtatgtgctgtatcccctggatttgtacaatgacagtgcaaactacgccctgacc
aaattcaagaagcagttcctctatgacgaaatagaggctgaggtgaacttgtgctttgat
cagtttgtctacaagctggcggatcagatatttgtctactacaagatcctagcaggaagt
cttctgcttgacaaacgtttgagagccgactgcaagaaccaaggggccaacattccctgg
ccgtcttccaaccgctacgaaacactgctgaagcaacgccacgtccagcttctaggccgc
tccattgatcttaacaggctcatcactcagaggatttcagctgccctgtacaagtctctc
gatctggccatcaatcgctttgagagtgaggacctcacctcaataatggaactggaaggg
ctcctggacatcaaccgcatgacacacaagctcctcagtaagtacctgaccctggacagc
ttggacgccatgttccgcgaggccaaccacaacgtgtcggcgccctacggccgcataaca
ctgcacgtcttctgggagctcaattatgacttcctgcccaactattgctacaacggctcc
accaacaggtttgtgcgcacggtcctgcctttctcccaggagttccagagggacaagccg
cccaacgctcagccccagtacctgtacgggtcaaagaccttgaatctggcgtacagcagc
attttcaacacctacaggaactttgtgggtcccccgcacattaaggtcatgtgtagactg
ctgggttaccagggcatcgccgtggtgatggaggaactgctgaaggtggtcaaaagcctg
cttcagggcaccataatgcagtatgtgaagaccctgatggaggtgatgcccaagatctgc
agactcccccgccacgagtacggttccccaggtatcctggaattctttcaccaccagctg
aaggacatcgttgagtacgcggagctcaagacagtgtgcttccagaacctgagggaggtg
ggcaacgccatgctgttctgtctgctgagcgagcagagtctgtcacaggaagaagtttgt
gatttgctgcacgctgcaccttttcagaacattcttccaagagtccatgtcaaagagggg
gaacgcctggacgccaagatgaagcgcttggaggccaaatacacagcactgcacctggtc
ccactgatagagcgcctcggaacgccacagcaaatcgccattgctcgcgagggcgacctt
ctgaccaaagagcggctgtgttgcggtctgtccatgttcgaggtcatcctcacacgcgtg
cgaggcttcttggacgaccccatctggcgtggcccgctgcccagcaacggcgtgatgcac
gtggacgagtgtgtggagttccaccggctgtggagtgccatgcagtttgtgtactgcatc
cctgtgggagcccatgagttcacagtggagcagtgcttcggagacggcctccactgggct
ggctgcatgatcatctccctcctgggacagcaccggcgctttgacatcctcgacttcagc
taccaccttctcaaggtgcagaaacacgacggcaaggatgaggtcatcaagagcgtgcca
ctgaagaagatggtcgacagaatccgcaaattccagatcctcaacaacgagattttcgcc
atcctgaacaagtacctcaagtctggagacggagagaacatgccggtggaacacgtgcga
tgcttccagcccccgatacaccagtccctcgccagcagctga
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