Etheostoma spectabile (orangethroat darter): 116696178
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Entry
116696178 CDS
T08457
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116696178 (sned1)
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
116696178 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
EGF_MSP1_1
cEGF
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
116696178
NCBI-ProteinID:
XP_032382851
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All DBs
Position
9:complement(25176377..25200154)
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AA seq
1389 aa
AA seq
DB search
MVLVLQALLPCFCTLLSLDLLPGVELAVPLEDFYPFGQDKGDSQTISQDDGGSRLVEISV
AFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESQEPSILRRASGDVRTYFSEFPNFNATWVLICTWHQVTFFGGNSLTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGKRYFNIPGSHTADVVN
VEGTTNVGYPGKWVFRIDDANVEVGGCNNSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGRQCQIDVDECASYPCQNGGTCEDQINSFICHCPPGYTGIQCETDIDECKDRPC
LNNALCVQGAGSFTCVCEPGYTGVLCETDINECESQPCLNGGECVDQVANFTCICPTAFI
GAVCETELEVLQDNSTEAKNQTALCEEEDCKKHQICEYTSLGIYNCTCAPGFYGDECEEE
CLCQNGGVCVDINGTCECPSGYTGLYCQFEVTQTPCSNNRPCPDGGPCLEYGGAYLCTCQ
TSGAELDHKDFYPYVQPQSVCDSSPCLNGGYCYERDGGYTCECKYGYWGKHCEKVRLNTC
ASGPCRNGGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCSSSPCLNGGTCFHYIGKYKCE
CTEAFSGRHCEISRISVPSSAELGCGLPPQVKNAEVQFSLTTPGSMAVYVCHSGFTPVPR
ATQSVCGIQGDWSQPPICEEINECLSQPCLNGGTCRNQVGSYQCKCDDGFSGNRCQTDIN
ECLSVPCKHGGTCEDQPGSYMCHCSQGFKGQNCEIEQDGCESNPCLNGGVCRGYRRNYLC
MCKDGFFGDQCQMLENPCVLQPCGNRGLCRSDKRGNYNCVCRVGHTGKDCEKDLLPPSGL
HVLRVEENEVELRWDEPDPSLSLISGFIVTYGPLGWSNHKTDFLERQQSTHVMRGLVPGL
LYNISTFSIKRNANNNDNSQPATALIRTRPRRVEQLQVVNVSSSQVWLSWLVHHAAVSRV
HVSLLPSDGSEARTAVFNTSTTEHTFSSLLPGQMYTVDVLTQSGIRPDEFPSTSHSAGPL
QFWTRPLPPQNLSLSHVTTNSALITWSRHPRNVPDGFVVNVTRGLNTRSRFLPSGKLGSY
TLRELTPGQHYYVALTSVKSTGQEQIHSIPQHVAFTTLPMGARSGRRERPTGTGQGTQVG
RILPPSQPQELGGPTETENSEELHRYTELIDGRGKITAKLIQLPRKAVRHRTKPDPPIRL
EKMEETTNKISLALQIQEEDLRTKPELPQDCRSLPCQNGGTCVNGGDSFICDCPAGFKGR
QCELSVCQRVPHPCTRLYSETKSVPVWEGGVCHYLYKRTYKVQQDVCYREICEPMPPKKS
QSRRTGRQQ
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcaagccctgctgccctgcttctgcaccctgctctccctagacctg
ctgcctggggtggaactcgctgtgcccttggaggacttctacccctttggccaggacaag
ggggactcccagaccatctctcaggacgacggaggctccaggctcgtggagatctctgta
gctttccccttctttggagacaggcacacaggactctatgttaacaacaatggcctcgta
tctttcctgagggaggtgtctcagttcacacctgtggcttttccaattgccggggataga
agggttgtggctccgttctgggcagatgtggacaaccgtcgtgcagggagggtcttctac
agagagagccaggagccctccatcctgaggagggcttcaggtgatgtcaggacgtacttt
tcagaattccccaacttcaacgcaacttgggtcctcatttgtacatggcaccaagttact
ttctttggaggcaactctctcacaccggtaaatactttccaagtggtgcttattacagat
ggagagctttccttcactatattccagtacaataacatcacctggaccactggcatgcat
gccagcagtggaggaaacctggctgggctgggagggattgcagcgcaggcaggtttcaat
gctggtgatggcaagcgttatttcaacatccccggctctcatacagctgatgtggtgaat
gttgagggaaccaccaacgtgggctacccaggcaaatgggtcttccgtatagatgatgca
aatgtggaagtaggtggctgcaataactcagcatccgtttgcccacacctgcgaccatgt
ctgaacggaggccagtgcatcgatgactgtataacaggcaacccctccttcacttgctcc
tgcttggctggcttcaccggccgacaatgccagattgatgtcgatgagtgtgcctcatat
ccctgccagaacggagggacatgtgaagaccagattaatagtttcatctgtcactgtcct
cctggatacactggcattcagtgtgaaacagacattgacgagtgcaaagacagaccgtgc
ctcaacaacgcgttgtgtgtacagggcgctggcagtttcacctgtgtgtgtgaaccgggt
tacactggtgtcctgtgtgagacagacataaacgaatgcgagtcccagccctgtctgaat
ggaggcgagtgcgtcgatcaggtggccaacttcacctgtatttgtcccactgccttcatt
ggagcagtctgcgagacagagttggaggtgcttcaggacaattcaactgaggcaaaaaac
caaacagccttgtgtgaagaggaagattgcaagaagcatcagatttgtgaatacaccagc
ttgggaatctacaactgtacatgtgctccaggcttctatggtgacgagtgtgaagaggaa
tgtctttgccagaatgggggtgtctgtgtggacatcaatgggacttgtgaatgtccttca
ggctacacaggactctactgtcagtttgaagtaacccagacgccatgcagtaacaacagg
ccgtgtcctgatggaggtccttgtttggagtatggaggagcctacctgtgtacatgccag
actagtggagcagagctagatcataaggacttctacccctatgtacagccccaatcggtc
tgcgactcctctccgtgtctgaatgggggctactgctacgagcgggatggaggctacacc
tgcgaatgcaaatatggatattggggaaagcattgtgaaaaagttagactcaatacatgt
gcttctggtccctgccgcaatggaggctcctgtaaggaagaagctgggagctacagatgt
gtgtgtccttacagattcactggaaaacactgtgaagtgggaaagccagacccctgttcc
tccagcccctgtctgaatggggggacatgttttcactacataggaaagtacaaatgtgaa
tgcacggaggccttcagcggcaggcactgtgaaataagcaggatctcagtaccaagctct
gcagagcttggctgtgggctgcctccacaagtgaagaatgcagaagtccagttctcctta
acaacaccaggctccatggctgtgtatgtatgccactcaggcttcacgcctgtgcccaga
gccacccagagcgtctgtggtattcagggggactggagccagccacccatttgtgaggag
atcaatgaatgcctatcacagccttgtcttaatggcggtacatgtcggaaccaggtcgga
tcctaccagtgtaagtgtgatgatggctttagtggaaaccgctgtcagacagacataaat
gaatgcctgtcggtaccctgcaagcacggggggacatgtgaggaccagcctggctcctac
atgtgtcattgctctcaaggcttcaaaggccagaactgtgaaatagagcaggacgggtgt
gagtccaacccctgtctaaatggaggtgtgtgtcggggttacagacggaattatttatgc
atgtgcaaggacggcttctttggggaccagtgccagatgttggagaacccatgtgtactg
caaccttgtggaaaccgcggcctctgcaggagtgacaagagagggaactacaactgtgtt
tgcagagtaggacacacaggaaaagactgtgagaaagacctgttgcctccttctggtctt
catgtgttgcgtgtggaggagaacgaggttgaactgcgctgggatgagccggatccctca
ctcagcctgataagcgggttcattgtcacctatggtcccctgggctggagcaatcacaaa
acagattttctggaaaggcagcagtccacccacgtcatgcgaggcctggtgcccggcctg
ctgtacaacatctccaccttctccatcaagcgcaatgccaacaacaatgacaacagccag
cctgccacagcactgatacgcaccagacctcggagggtggagcagctgcaggtggtcaat
gtgtcctcctctcaggtttggttgagctggttggttcatcatgcagcagtcagcagggtg
cacgtgtctctgttgccttcagatggcagtgaagctcgcacggccgtgtttaacacaagc
accactgagcataccttcagttcattacttcctggccagatgtacacagtggatgtgttg
actcaaagtggaatcagaccagatgagtttccctccaccagccactcagctggacccctg
caattctggacaaggcctctcccgccacagaacctctccctgtcacatgtgaccactaac
tcagcactgatcacctggagccgccacccaagaaacgtcccagatggctttgtggtcaat
gtgacccgagggttgaacaccaggagtcgcttcctgcccagtgggaaattaggatcatat
accctgcgtgaactgacaccaggacagcactactacgtggctctcacatccgtgaaaagc
acagggcaggaacagatccacagcatacctcaacacgtagccttcactaccttgccaatg
ggggcaagatcagggagaagagagaggccaaccgggactggacaggggactcaggtcgga
cgcatacttcccccatctcagcctcaggaactgggaggcccaacagaaacagagaactca
gaggaattgcacagatacacagagctcattgacggaaggggaaagataacagccaagctc
attcagttgcctcgaaaagccgttcgacatcgtactaaacctgacccaccaattagatta
gagaagatggaagaaacaacaaacaaaatcagccttgcactgcagattcaagaagaagat
ttaagaactaagcctgagttgccacaggactgtcgcagtctgccctgccagaacgggggc
acatgtgtgaatggaggcgactccttcatctgcgactgcccagcggggttcaagggcaga
cagtgtgaactgtcagtgtgccagcgagtgccgcacccctgtacccgtctctactcggaa
acgaagagcgtgcctgtctgggagggtggagtgtgccactacctgtacaaaaggacatat
aaagtacagcaggatgtttgttatcgagagatttgtgaacccatgcctccaaagaaaagt
cagagcagaagaacaggcagacaacaataa
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