Etheostoma spectabile (orangethroat darter): 116696216
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Entry
116696216 CDS
T08457
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116696216 (fxr1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116696216 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
116696216 (fxr1)
mRNA cycle factors
Stress granule specific factors
116696216 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
116696216
NCBI-ProteinID:
XP_032382921
LinkDB
All DBs
Position
9:10102356..10112522
Genome browser
AA seq
765 aa
AA seq
DB search
MQELPLQPSNFFSSDASRSTCRPDILCVSNMEELVVEVRGSNGAYYKGVVKDIHDDSLTI
AFENNWQPERQVPFNDVRMPPPADAKKEIGEGEEVEILSRANDQEPCGWWLAKVRMMKGA
FYVIEYAACDATYNEIVTFERLRPVNTNKPITKNSFHKCTVPVPQDLQEACQNENAHKDF
KKAVGACRISYCPETSQLLIVSTNETTVKRVSLLSDMHLRSIRTKLLLMSRNHEATKHLE
TSRQLVSSFQEEFMVRTDLMGLAIGSHGSNIQQARKVQGVTAIDLDEETGTFRIYGETAE
AVKKARNYLEFLEDSVQVPRALVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNDNKQPRQE
STQGMVPFTFVGTKESIGNVQVLLEYHISYLNEMVELLAEGQQLEEELRQIVDYTQGSSL
ARFRISNTSHNGCDVDEVEQLRLERMQIDEQLRQITQGHRPGDREKGERGERGERGGYNT
DNSANASSTSLHGSRSYNGRGRGRRGHGYSTGYGTNSEQSNASETDSERREELSDWSLAV
EDQERERERGSRPQRDGRRRPGPGRGRGGPGGRGRGGRGGYISSAGPRDHEDNHAYGAAE
TNTETDQTADTDASESNLPANRRRRSRRRRTDEDTTLMDGMSESDNASMSENGIDDSEAK
PQRRNRSRRRHIRLPEERQPVTVADYISRAESQSRQMTTTKDTKKNKDVGQVDTIAEDSP
PSAPATTNGSNNDAAISKGSNASGASAKISYKGDSNPQPVVNGLS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttacctctccagccttcaaacttcttctcttccgatgcctcaaggagcacc
tgtcgtcccgacatcctttgcgtgtccaatatggaagaactggtggtggaggtccgtggc
tccaacggggcttattacaagggcgttgtcaaagacatccacgatgactctctcaccatt
gcctttgagaacaattggcagccagagcgccaggtgcccttcaacgacgtcaggatgcca
ccgcccgctgatgccaagaaggagattggagagggcgaggaggtggagatcctttccaga
gccaatgaccaggagccgtgtggttggtggctggctaaagtccgcatgatgaagggagct
ttctatgtgattgagtacgcagcctgtgatgccacctacaatgagatagtgacctttgag
cgtctgcgtccggtcaacactaacaagcccatcaccaagaactcctttcacaagtgtact
gtccctgttcctcaggatctacaagaagcgtgccagaatgagaacgcacataaagacttt
aagaaagccgtgggagcctgtcgcatctcatactgccccgagaccagccaactactgatt
gtgtctaccaatgagacaacagtgaagcgtgtgtctttgctgagtgacatgcacctgcgc
agcatcaggaccaagctgctgctaatgtcacgcaaccacgaggccacaaaacacctggag
acctccaggcagctggtgtcgtccttccaggaggagttcatggtgagaacagatctgatg
ggcctggccatcggcagccatggcagcaacatccagcaagcacggaaagttcagggtgtc
actgccattgaccttgacgaggagactgggaccttcaggatttatggagagacagcagag
gcagtaaagaaggccaggaactacttggagtttttggaggactctgtccaggtgcccagg
gctctcgttggcaaagtgattggtaagaacggtaaggtcatccaggagattgtggataag
tctggtgtggtgagggtcaggatcgaaggagacaatgacaacaagcagcctcgacaggaa
tcgacacagggaatggtcccattcacctttgtaggtactaaggagagtattggcaatgtt
caggtcttgctggagtaccacatctcttacctcaatgagatggtggagcttcttgcggaa
ggccagcagctagaggaagagctgaggcagattgtggattatacacagggaagcagccta
gcaagattcagaataagcaacacaagtcacaatggatgcgatgtagatgaggttgagcag
cttcgtctggagaggatgcagattgatgaacagttacgtcagattacccagggtcaccgc
ccaggagaccgagagaaaggagagagaggagagagaggggaaagaggagggtataataca
gataacagtgccaatgcctcctctacctctttacatggcagtcgctcctacaacggccga
gggcgtgggcgccgaggccatggctacagcactggatatggcacgaactccgagcagtcc
aacgcctctgagacagattcagagcgcagggaagagctcagtgactggtctcttgctgta
gaggaccaggaaagagagagggagagaggctcacgaccacagagagatggccgcaggagg
cctggacccggtagaggtcgaggagggcctggaggacgggggagaggaggaagaggagga
tacatcagctctgcaggtcctcgggaccatgaggataatcatgcctatggagccgctgag
acaaacaccgagacagaccagacagctgatacagatgctagcgagtccaatttgccagca
aaccgccgcaggagatctcgacggcgcagaacagacgaggacaccacactgatggatggc
atgagcgagtcagacaacgcctccatgagtgaaaatggaatagatgactcagaagctaaa
cctcagcgacgtaaccgtagtcgacgtcgccacatccgcctgcctgaggagaggcagcca
gtgacagtggctgactacatatcccgggctgaatctcagagcagacagatgacgaccacc
aaggacaccaagaaaaacaaggatgtgggtcaggtggataccattgctgaggacagccca
ccgtctgccccggcaaccaccaatgggtctaacaacgatgctgccatcagtaaagggagc
aatgcctctggagcttccgccaaaatctcctacaagggggactctaacccgcaacctgtt
gttaacggactctcctag
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