Etheostoma spectabile (orangethroat darter): 116696385
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Entry
116696385 CDS
T08457
Symbol
limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116696385 (limch1)
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
116696385 (limch1)
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GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
116696385
NCBI-ProteinID:
XP_032383199
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All DBs
Position
10:6770238..6867191
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AA seq
1364 aa
AA seq
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MASPVADIGQSHQHHPVTNSAADSAFQEAQTWIEAATGRCFGDKDFRGGLENGILLCELL
SSIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPTAKGSD
CSRKLKNVLITIYWLGRAANSCTSYNGPTLDLKEFEGLLSQMRKEAEEAESPKRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVLVARGSSDGRGSDSESDG
PPHRKIPDIRKDDMLARRTSISEPRTAMPFNQYLPNKSNQSGYLPTPLRKKKNDKEDGAR
KSWSTATSPVGGDRPLSPNEPPSLDDPPGESPSLSATPPLEPQIQIQKTNQTKKDDEEGK
QTASTLCLEIHAAGLRRSSEPLPCRVPQPCAEPPMVNVTHLIITSEQSTRSCSEELFHHS
TTLAANAAATPAVAASPIITPGKHPPVPAQEEAAVTKGATGIPLVAERDEKLARQMLISP
KHITIPSPPHFLPVPTIVATATTATTDTGRRKGRALSESDDPQGGNSWLASSLPATFSRT
HSVSDDPQSVSMIDMRGEEEAILQPHSQVRHELMHNQYNRMKEEDDHWQDDLARWKNRRR
SISQDLIKKEEERKMMEQLLSGDTCTSMRRRSIKTYREIVQDKERREDELRDAYRRARTP
EEASFILQRYAQRFSISDAVLERLQLPKILDRSLSADPTFSGSPFPLSLSASPTTPDPFD
MDPNGPMKYLRQLSAPAPKFTSTLEAQIEEFPKDSSNQRPQIRSRSSEPPSTRNLSPKPV
PLLTPKPYFHSGPTTAEPWPSKADGFLRVNGIGSDDVPSTPDSQGRESPPHFQASPSQTS
NSTVDAPSSAALPTCSPHTSTREESSVSTKAKEAQSGTEPVSKDLQAEKVIQHSAPPSRP
TSLPSELQKPEESIGKTESQSVAAAEVKSSAAAQEMPPAEAKQEQDITEPSGQSICNPVQ
SGISTQQSQPATSQASVPSFHELPQRRENAPSLAAPGSFEYHPPRETTAEFANSVRSPLA
TSNPKLRWEFFVPPEEAEKDCRGNVSVPVLPQARRGDRWSWDPDEERKRQERWQQEQERM
LQEKYRCEQEKLKEEWEKAQREVAEEERKYHEEERRILEETVTPLTPRSSALPSPSRGEA
SSTSEPQDTIVRSLGDWERKQELLERHSKGSTESVEWKRRENDRTSDISTADDSMKTGRS
LVSQSSSQPETLGHSLQNGQKLPAMPSKTSTPVKKQEEPSADSNKPNRPAGDRRSGPIDN
IMCPSSSKSPTACPPPPDTLPPTPNRSVSGKKLCSSCGQPLGKGAAMIIETLSLYFHIHC
FKCGVCKGQLGDTTTGTDVRIRNGLLNCHQCYIRSRSAGQPTTL
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggttgcagacataggacagtctcatcagcatcaccctgtgaccaactcg
gccgctgactccgcgtttcaggaggcgcagacatggatagaggctgctacaggaagatgc
tttggtgacaaggacttcagagggggtttggagaatgggattttgctatgcgagttgttg
agctctattaaacccggcctggtgaagaaaatcaacagacttccgacacccatagcgggc
ctggacaacctcagtgtgtttctgcgtggctgtgaagagttgggactgaaaggttcccag
ctgtttgaccctggagacctgcaggacacgtcgacacgccccactgccaagggaagtgac
tgcagccgaaagctcaagaatgttctaatcaccatctactggttgggtcgtgctgctaac
agctgtacctcctacaacggtcccacgctggacctgaaagagtttgagggcctgctttca
cagatgcgaaaggaggcagaggaggcagagagccctaaacgcagcatccgggacagtggc
tacatcgactgctgggactctgagcgcagcgactctctctccccaccacgccacggccgc
gaggactcgttcgacagtctggactccttcggctcacgctcacgacagaccccatcgccg
gacgtcctggtcgcccgcggcagcagtgatggccgcggcagtgactcagagtccgacggt
cccccccacagaaagatacctgacatccgtaaggatgacatgttggcacgtcggacgtcc
atcagcgaaccacgaacagccatgcctttcaaccagtacctgccaaacaagagcaaccag
agtggatatttgcccactccactccgcaagaagaagaatgataaagaagatggagcacgc
aagagttggagtactgctacttcacctgtagggggagacagaccactcagtccaaatgag
ccccctagcttagacgacccacctggagagtcccccagcttgtccgctaccccgcccctt
gaaccccaaatacagattcagaagacgaaccagactaaaaaggacgatgaggaagggaag
cagactgcctctacactttgccttgagatccatgcagcaggcttaaggaggagcagtgag
cctctgccatgtagagtcccccaaccctgtgcagagccacccatggtgaacgtaactcac
ctgatcatcacctctgagcaaagtactcgctcgtgctcagaggaactcttccaccattcc
acaactctagcagcaaacgctgcagcaacccccgcagttgcagcaagccccatcatcacc
cccgggaagcatccacctgtcccggcacaggaggaggcggctgtgacgaagggagccact
ggtatcccgttagtcgcagaacgagatgagaagctggctcgccaaatgttgatctctccc
aaacacatcaccattccgagtcccccccacttccttcctgtgcccactatcgtggcaact
gctacaacagcaacaactgatacaggacgacggaagggaagggcgctcagtgaaagtgac
gacccacaaggagggaactcttggttggccagcagtcttccagcaacattcagccgcaca
cacagtgtgtcagatgatccacagagtgtaagtatgatcgatatgcgtggtgaggaggag
gccatcttgcagccccacagtcaggtgcgtcatgaactgatgcacaaccagtataacagg
atgaaagaagaggatgatcactggcaggatgacctggcccgatggaaaaatcggaggagg
agtatttcccaggacctaatcaagaaggaggaggagaggaagatgatggagcagttgctg
tcaggagacacctgtacctccatgaggaggagaagcatcaagacttacagagagatagtg
caggacaaggagcgtcgtgaggatgagctgcgggatgcgtacaggagagccagaacccca
gaggaggcatcattcatcctccagcgttatgcccagcgtttctccatcagtgatgcagtc
ctggaacgcctacagttgccaaagatcctggaccgcagcctatctgctgatcccaccttt
tccggctcacccttccctctctccctgtccgcctccccaacgaccccagacccctttgac
atggaccccaacggacccatgaagtatctgcgccagctgtctgctccggctccgaagttc
acatctacactggaagcgcaaattgaggagtttcccaaagactcttcaaaccagcggcct
cagattcgatctcgctcatctgagccgccatccaccagaaacctgtcgcctaaaccggtg
cctttgctgacgcccaagccttacttccattccggacccacaacggctgaaccatggccc
agcaaggcggatggttttctccgagtcaacggcataggaagtgacgacgttccttccact
cctgacagtcaaggaagggaatctccgcctcattttcaggcgtccccttcccaaaccagc
aacagcactgtagatgctccgtcgtcagcagccttaccaacatgcagtccacacacctca
accagagaagaaagctctgtgtcaacaaaggccaaggaggcacaaagtggcacagaaccg
gtttctaaggacctccaagccgagaaagtcattcagcattcggcgccacccagccggccc
acctcgctgccatcggagctgcagaagccagaagaaagcattgggaagactgaaagccag
tcagtagctgctgcagaggtgaagtcaagtgctgcagctcaagaaatgcctcctgcagaa
gccaaacaagaacaagatataactgaaccatctggtcaaagcatctgcaaccccgtccag
tcagggatcagcacacagcaaagtcagccagcaacttcacaggcaagtgttcccagtttc
cacgagttgccacagcgaagagagaatgcaccaagcttagctgcaccaggatcatttgaa
tatcacccaccaagggaaacaacagcagagtttgcaaacagtgtcaggtctccgctggca
accagcaaccctaagttacgctgggagttcttcgttccgccagaagaggcggagaaggat
tgccgtggaaacgtgtcagtcccggtgttgccccaggccaggcggggtgaccgctggtct
tgggacccggatgaggagcgaaagcgtcaggaaaggtggcagcaagagcaggagcgcatg
ctgcaggagaagtaccggtgcgagcaggagaagctgaaggaggagtgggagaaagcccag
agggaggtggccgaggaggagaggaagtaccacgaggaggagcgtaggatactggaggaa
actgtgacgcctctaactccccgctcctcagccctgccctcccccagccgaggcgaggcc
tcctctacctcggagccccaagacaccatcgtccgttcgcttggtgactgggaacgcaaa
caggaactgctggagaggcactcgaaggggagcacagagagtgtcgaatggaaacgaaga
gaaaacgacaggaccagtgatatcagcaccgctgatgacagcatgaaaacaggcagaagc
ttggtgagtcagagcagcagtcagccagagacactcggtcacagtctgcagaacggccaa
aaactccctgcgatgccgagcaaaacctcgactcctgtgaagaaacaagaagagccttca
gcagacagcaacaagcccaaccggcctgcaggagacaggaggagtggtccaatagataat
atcatgtgccccagctcatcaaaaagccccacagcatgtccaccacctccagacacactg
cctccaacacctaacaggtctgtcagtgggaagaaactgtgctccagctgtgggcagccg
ttagggaagggggccgccatgatcatagagaccctcagtctttacttccacattcactgc
tttaagtgcggagtgtgtaaaggacagttaggcgacacgaccacggggacggacgtccgg
atcagaaacggtctcctcaactgccaccagtgctacatccgctcccgctcggccggacag
ccaaccacgttgtga
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