Etheostoma spectabile (orangethroat darter): 116696428
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Entry
116696428 CDS
T08457
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116696428
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116696428
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116696428
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116696428
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Protocadherins
116696428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
116696428
NCBI-ProteinID:
XP_032383324
LinkDB
All DBs
Position
10:complement(2646854..2669344)
Genome browser
AA seq
1041 aa
AA seq
DB search
MGSLHLKPLTRPGSRAAMSGGDMATLRREVLLLLAVALLVSCGAAPTDILYRVPEEQPPN
TLIGSLAADQGLPDTGHLYKLEVGSPYLRVDGKTGDIYTTDIPIDRETLKDCRNLFDGDK
CFLEFEVSITDMVKGISTGPRLIEGRIEVLDINDNTPQFSSPILTLSIPENTHIGVLFSI
PMATDRDSGTNGVAEYSLTTGPDADQLFTLQVAVDSDEKLPQLVVMGNLDRERKDSYDLN
IRVVDGGRPARASSALLRVTVTDQNDNAPKFERSHYEADLPENSPQGHSILQVRANDADT
GTNGEIDYSLHQASEAVQRLLRIDRSTGIIYVKGLVDREEESFLKFFVVAKDRGPNSKSS
KALVTVNVKDQNDNAPAIEIRGIGLVTHHDGVANISEDMPIGTPVALVQVSDRDEGENAV
VTCVVAGDVPFQLRPASESANDRKRKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSST
NSLKVQVTDVNDNTPNFSPALLEVDFAEGNQPGEKVLGVTATDADSSTNAELVYSIVESH
ATRLFEIEANTGDIRVRNLLDREETERYEFRVAAADKGLPSKTGTATVVINVLDRNDNDP
KFMLSGYSFSVIENMAPLNPVGVVTVTDADKGKNAQVRLFVEPDNGKFVIQNGTGTILSS
ISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANSSYTYMSPVT
PPDTRVEMVEAEDMDSGPNAELVYTITGGNPYDLFRISPSSGEITLMQEFTGKHNGLHRL
VVKVSDKGKPPRHTTALVHVFVNDTKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRS
NILYGSLAGIAGVILVIVAVVVIRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKS
KKGKAPKPSKPLEEDVEDGLQKGLKFNLINDTVNDSPRIHLPLNYPPGSPDLGRHYRSNS
PLPSIQLQPQSPSASKKHQAVQDLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSSKQ
VGDYANTPMYNRDIYWTKRVW
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgggatctttacatttaaagccgctcacccgtccagggtccagagcggcgatgtcgggt
ggagacatggcgaccctgaggcgggaggtcctgctgctcctggcggtcgccctgctggtc
tcctgcggcgccgcgcccaccgacatcctgtaccgggtccccgaggagcagccgcccaac
acgctgatcggcagcctggcggcggaccagggcctgcccgacaccggacacctctacaag
ctggaggtgggctcgccgtacctgcgggtggacggcaagacgggcgacatctacaccacc
gacatccccatcgaccgcgagacgctgaaggactgccgcaacctgtttgacggcgacaag
tgcttcctggagttcgaggtgtcgatcaccgacatggtgaaagggatcagcaccgggccg
cggctgatcgagggccgcatcgaggtgctggacatcaacgacaacacgccgcagttctcc
tcgcccatcctcacgctgtccatccccgagaacacgcacatcggcgtcctcttctccatc
cccatggccacggaccgggactccggcaccaacggcgtggccgagtactcgctgaccacg
gggccggacgccgaccagctcttcacgctgcaggtcgccgtggactcggacgagaagctg
ccccagctggtggtcatgggcaacctggaccgcgagcggaaggactcgtacgacctgaac
atccgggtggtggacggcgggaggccggcgcgggcgagcagcgccctgctgcgggtcacc
gtcaccgaccagaacgacaacgcgcccaagtttgagaggagccactacgaggccgacctg
ccggagaacagcccgcagggacactccatactgcaggtccgagccaacgacgcagacacc
ggcaccaacggcgagatcgactacagcctccatcaggcgtcggaggccgtccagaggctt
ctgcgcatcgaccgctccacgggcatcatctacgtcaagggcctggtggaccgcgaagag
gagagcttcctcaagttcttcgtggtcgccaaagaccgcgggcccaactccaagagctcc
aaggccctggtgaccgtcaacgtcaaggaccagaacgacaacgcgccggcgatcgagatc
cgtggcatcggcttggtgacgcaccacgacggcgtcgccaacatctccgaggacatgccc
atcggcacgccggtggcgctggtccaggtctcggatcgcgacgagggggaaaacgcggtg
gtgacgtgcgtggttgccggcgacgtcccgtttcagctgcggcccgcgagcgagtcggcc
aacgatcgcaagaggaagtacttcctgcagaccaccaccctgctggattacgagcgcgtc
aaggactacaggatcgaaattgtcgccgtggattcggggaacccggcactatccagcacc
aactccctcaaagtgcaggtcacggacgtgaacgacaacacgccaaatttttcccctgcc
ttgctcgaggtggacttcgcggagggcaaccagccgggcgagaaggtgctgggcgtcacg
gcgacggacgcagacagcagcaccaacgcggagctggtctacagcatcgtcgagtcccac
gccacccggctctttgaaatcgaagccaacaccggggacatccgtgtgaggaacctgctg
gaccgggaggagacggagcgctacgaattccgcgtggcggcagcggacaagggccttcct
agcaaaaccggcaccgccacggtggtgatcaacgtcctggaccgtaacgacaatgacccc
aagttcatgctgagcggctacagcttctcggtgatcgagaacatggctccgctcaatcct
gtcggcgtggtgacggtcacggacgcagataagggcaagaacgcccaagtgaggctcttt
gtggaaccggacaacggcaagttcgtcatccagaacggcacgggtacgatcctgtccagc
atctcgttcgaccgggagaaggagagcacctacaccttccggctgaaggcggtggatgcc
ggtgacccacctcgatcctcctacgtgggcgtgacaatcaacgtcctggacgagaacgac
aacgccccttacgtcaccaaaccggcgaactcctcctacacatacatgtcaccggtcacc
ccaccagacaccagggtggagatggtagaggccgaggacatggactcgggacccaacgcc
gaactcgtctacaccatcacaggaggaaacccgtacgacctgttccgcatctcgcccagc
agcggggagatcaccctgatgcaggagttcaccggcaaacacaacgggctgcaccgacta
gtggtaaaggtcagcgacaagggcaaacccccccgccacaccaccgccctcgtccacgtc
tttgtcaacgacaccaagtccaacgtgtcgctcatcgaagcgctggtggggcacagcctc
tacacccctctggaccgggacattgccggagatcccaactacgcgctcgcccagcgcagc
aacatcctgtacggcagcctcgcgggcatcgccggcgtgatcctggtgatcgtagccgtc
gtggtgatccgacaccggctgcagaaggacacaaagagcgggtaccaggccggcaagaag
gagagcaaggacctttatgcgcccaagcaaggccccaaaaacggcaaagggaaaaagagc
aaaaaggggaaagctcccaaaccgtcaaagccgctggaggaggacgtagaggacggctta
cagaaaggcctcaagttcaacctcatcaacgacaccgtcaacgacagccccaggatccac
ctgcccctcaactaccccccggggagccccgacttggggcgccactaccgctccaactcc
cccctgccctccatccagctgcagcctcagtcgccctccgcctccaagaagcaccaggcc
gtccaggacctccccgccaccaacaccttcgtgggaacgggcgacaacaactccacgggc
tccgaccaatattcggattacagctacaaggccaacccgcccaaatacagcagcaaacag
gtaggcgactacgcaaacacgccaatgtacaacagggacatctattggaccaagcgggtg
tggtag
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integrated database retrieval system
