Etheostoma spectabile (orangethroat darter): 116696443
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Entry
116696443 CDS
T08457
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esp03016
]
116696443 (elp1)
Transfer RNA biogenesis [BR:
esp03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
116696443 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
DUF6374
Motif
Other DBs
NCBI-GeneID:
116696443
NCBI-ProteinID:
XP_032383347
LinkDB
All DBs
Position
10:5022456..5037327
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AA seq
1314 aa
AA seq
DB search
MRNLKLLKSLRSSELQGPGSPQCLAVRADTGSLLVASHYSITEYDPRTGQVVSEASLTAE
GFLPEDGSGMVVGLQDLAELESACLGTAGGDVVLFNFNTCQLECVGSVDSGLTSMTWSPD
EELVVLTTGQETIIMMTKDFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAQ
RKTQEVQPAAAWDDRRPRVTWRGDGQLFAVSAVCLQTGARKVRVWNREGVLQATSEPING
LEQALCWKPSGNLIASTQRHPNKHSVVFLEKNGLLHGDFTLPFSKDQAKVKDLLWNSDST
VLAVWLEDMTAGEDEQVNTFIQLWVVGNYHWYLKQSLDFGRDSQKSPVCVCWDPERSLRI
HVVTRSWTSITYDWGWTTGRSLGLDATDNANVAVIDGDKILVTNFRQCVVPPPMCSFELQ
LTSPVNQVTFHCQPQRTNQLAALTSDGQISVYSQDSGQQVDKTADGFRTMSRPLVLQKTF
RVTLLQEHPLALRQLLWLEDELFVCVSSSLLPTSSTLLMLHPAHDADDTLTVRSEIEVDG
VVVSMIHSSQTGTVALQLEDGRIRKLCWDRPEPSVEDWRDLSRCAINFPVPCVQTALGSI
SGEEYLFGLTDRSHLYAGDTEVRSGLQYSSFAVCNNFLLITTHSHTCRCLQLSVLSVKGL
QAALASDGGQNDETLRRVERGSRIVTVVPQDTRVILQMPRGNLETVHHRSLVLAQLRKWL
DSLMFKDSFECMRKLRINLNLIYDHNPKIFLENTETFITQLDSISHINLFLTELKEEDTT
GTMYPRPECSPGQAQTVSGQKKVDVVCDALRSAMESMDPNKFFLSILTTHVKKTVPELEV
ALQKVHELRVNPPDAPGAVSAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKD
PKEYLPFLNMLRNLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFREALQLVKEQKLYSE
ALRLYTTDAAHYKALSCAYAEHLMEQQQAEQAGLLLWRCGEPACALQAFASSSSWRNAIC
AAQQIPLPPDQLALLARDLAEKLTEQRRYSEAALLLDQYAKDCEEAILALVTGSVWEEAL
RLIYMHNRQDITETNLKPALLEAFSTQTAFLEAQVATFTRHRTRLAVVREQKEKARLDMM
DEDGLDCPDAELYSEASSVMTGSKYSHSNSRISSRSSKNRRKAERKKLSLKEGSPMEDRA
LMYALGEILTTVDKMREEVHSALKALVLFQFDKQAEKLQLAYDDALQVMEAAVPEVWPEG
LQNSQAPLTGPNSTANSIMASFQQQQRPAASQAPEVMMPPKMRNGVKWKLSILM
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttaaagctgctgaagagcctacggagctccgagctgcagggtccaggctcc
ccacagtgtttagcagttcgggctgacaccggctcgctgctggttgcttcccactactcc
atcacagagtacgacccacgcactggccaggtggtcagtgaggcctcattgacagctgag
ggtttcctcccagaggacggcagcggtatggtggttggactccaggacctggctgaactc
gagtcggcttgtttgggcacagctggtggtgatgtcgtcctcttcaactttaacacctgc
cagttggagtgcgttggcagtgtggacagcggtctgacctcaatgacatggagtccggat
gaagagcttgtcgttctcactactggccaggaaacaatcatcatgatgaccaaagacttt
gagccgatcactgaggttggaatccaccaggatgactttggtgaagggaagtttatcacg
gtgggttgggggaagaaggagactcagttccacggctcagaggggaaacaggcagcacag
aggaagacccaggaggtgcagccggccgcagcctgggacgaccgcaggcccagggtgacg
tggcgaggggatggtcagctgtttgccgtcagcgccgtctgtcttcagaccggagccagg
aaggtccgggtctggaacagggaaggtgttttgcaggcaaccagcgagcccatcaacggc
ctggagcaagcgctctgctggaaaccctcaggcaacctgatagcgagcacacagcgtcat
cccaacaaacacagcgtggtcttcctggagaagaacggactgctgcatggagattttacc
ctcccattcagcaaagaccaggccaaggtgaaggatttgctgtggaacagtgactccact
gttttagctgtgtggttggaggacatgactgcaggagaggacgaacaagtcaacactttc
attcagctgtgggtggtggggaactaccactggtatctgaagcagagcctggactttggc
agagactctcagaagtctccggtctgtgtctgctgggaccccgaacgctccctgagaatc
cacgtggtgacccgcagctggaccagcatcacctacgactggggctggacaactgggagg
agtcttgggctggacgccaccgacaacgccaacgtggctgtgattgatggagataaaatc
ctggtgacaaacttcaggcagtgcgtggttcctcctcccatgtgttcatttgagctgcag
ctgacttcaccagtcaaccaggtgaccttccactgccaacctcagaggaccaatcagctg
gcagcgttgacctctgacggacagatctcagtctacagccaagattcaggacaacaagtt
gacaaaacagcagatgggttccgcacgatgtctcgtcccctggtcctccagaaaactttt
agagtgactcttctccaggagcatcctctggccctgcggcagctgctgtggctggaggac
gagctgtttgtgtgtgtgagctccagtctgctgccaacctcctccaccctgctgatgctt
caccctgctcatgacgctgatgacacactcactgtcaggtctgagatagaggttgacggt
gttgttgtcagtatgattcactcctcccagactggcacagtggcactacaactggaagat
ggacggatcaggaagctgtgctgggatcgtcctgagccatctgtggaggattggcgggac
ttgagcagatgtgccattaatttccctgttccctgcgttcagacggccctcggcagcatc
agtggcgaggaatatctgtttggcttgacggacagatcccacctgtatgctggagacaca
gaggtacgctctggcctccaatattcctccttcgccgtttgcaacaacttcctcctcatt
accacacactcccacacctgccgctgcctccaactgagcgtgctcagtgtcaaagggctc
caggcagccttggcctcagatggaggtcagaatgacgagacactgcggcgggtggagcgg
ggatccaggatcgtcactgtggtaccgcaagacaccagagtgattctgcagatgccccgt
gggaacctggagacggtgcatcatcgatcgctggtgttggcccagctcaggaagtggctg
gacagtttgatgttcaaagattcttttgagtgtatgaggaagctgaggatcaacctgaat
ctcatttatgaccacaacccaaagattttcctggagaacacggagaccttcatcacacag
ctcgactccatcagccacatcaacctcttcctcactgagctcaaggaggaagatacaacc
ggcaccatgtacccccgtcctgagtgcagcccgggccaggcccagacggtttctgggcag
aagaaagtggacgtagtttgtgatgctttacggagcgccatggaatcaatggatccaaac
aagttttttctgtccatactgacaactcacgtgaagaagacggttccagagctggaggtc
gctctgcagaaagtccacgagcttcgagtgaaccctcctgatgctcccggtgctgtgagt
gctgaagaggcgttgaagtacctcctcttcctcgtcaacgtcaacgacctgtacgaacac
tctctgggaacgtacgactttgacctcgtgctcatggtggccgagaaatctcagaaggac
cccaaagagtacctacccttcttgaacatgctgaggaacctggagccaaactaccagcgc
tacaccatcgacaagcacctgaaacgctacaggaaggccctgcaccacctcagcaagtgt
ggagaggaacatttccgtgaagctttgcagcttgtaaaggagcagaaactctacagtgaa
gctctgcgactgtacacaacggacgctgctcactacaaggctctgagctgtgcttacgcc
gagcacctgatggagcagcagcaggcggagcaggccggcctgttgctatggcgatgcgga
gagccagcctgcgccctgcaggcattcgccagcagctccagttggagaaacgccatctgt
gcggcgcagcaaatcccactaccacccgaccagttggctctgctggcaagggatctggca
gagaagctgactgaacagcgacggtactcagaagctgctctgctgttggaccagtacgcc
aaagactgtgaagaggccatcttggctctggtcactggttcagtctgggaggaggcgctc
cgattgatttacatgcacaacagacaggacatcacggaaaccaacctcaaacctgctctg
ttggaagctttcagcacccagactgcattcctggaggcccaagtagcgacgttcacgcgg
cacaggacccggctggccgtggtccgggagcagaaagagaaggccagactggacatgatg
gatgaggatggtctggactgtcccgatgccgagctttactctgaagccagcagtgtgatg
accggctccaaatactcccacagtaactcccgcatctcctcgaggtcgtcaaagaaccgt
cggaaagcagagaggaagaagttgagtctgaaggagggaagcccgatggaagacagagct
ctgatgtacgctctgggggagatcctcaccactgtggacaagatgagagaggaagtgcac
agcgcgctgaaggccctggtgctgttccagtttgacaaacaggcggagaagctgcagctg
gcctacgacgacgccctgcaggtgatggaggcagccgttccagaggtgtggcctgagggc
ctgcagaacagtcaagctccgctcactgggccaaactcgactgcaaacagcatcatggct
tctttccagcagcagcagagacctgcagcctcacaagcccctgaggtcatgatgccacca
aaaatgagaaacggagtcaagtggaagctctctattcttatgtaa
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