Etheostoma spectabile (orangethroat darter): 116696471
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Entry
116696471 CDS
T08457
Symbol
vps8
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116696471 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116696471 (vps8)
Membrane trafficking [BR:
esp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116696471 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
TPR_VPS8_2
Clathrin
zf-RING_UBOX
zf-RING_5
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
zf-RING_11
ANAPC4_WD40
PHD_4
zf-rbx1
Beta-prop_EML_2
zf-C3HC4
Beta-prop_HPS5
WDR55
PHD
EIF3I
PHD_NSD
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
116696471
NCBI-ProteinID:
XP_032383395
LinkDB
All DBs
Position
10:complement(24468341..24647972)
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AA seq
1406 aa
AA seq
DB search
MSDSPDSRSLLSASSQLNLMEIDAIDDKEFDIPQVDTPPTLESILNELEDEEEPFVLEDT
CVLNTDNMDAHSCDTSSLASSDSGDPAHLKRRRRTMDLNATVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVAGVIAVGTSHGLALVFGKDTNQALRLCLGTKATGAEFGAVSALS
INHDCSRLLCGFAKGQITMWDLASGKLLRTITDAHPPGTAILHVKFTDDPTLAVCNDSGG
SVFELAFRRVMGMRSCDSRCLFSGSKGEVCCVEPLRAPPDFRDHPITHYSLLAMASLTKI
LVIGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVPVQKTVNPILAFCKGDTVYFLLVRKEE
TGTIHVIKQKQLHLSCDIISLSWINSRTLVLVDSHEKLQVVDRPSQEVLETLDLEQVQLV
YNSRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQLVYLGTKSAHIMALRNWRERIDC
LLKQEHFVEALSLAWSFHEGTAKAVVGLFGEPAKRKGVVGDKMVEILFQFAEHALKKCPE
QGKIQVMEQHFHDVVPVLVDYCLLLKRTDLMFNQLYSRLVXNMVAKGVFLESLECTLLRN
XLGHLTTPVMKDLPFHXHGNGMMDSLXRCIVHLDVTSLDIQQVVQVCWENQLYDAMIYVF
NSSMNDYITPMEKLFAVIGPPLRAGRGLTDEEVVMGNKLLVYISVCVCGRAYPLGNIPED
LVVQVKNQVFEFLIRLHSADSLEEEDVFPYIRTLLHFDTREFLNVLAMTFEDFKNDKQAL
EYQQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCP
DDDSRHTERQQVLLELLQVGGVVQFNEERLLALAEKAKFYQICEFLYEKKHLYDRIIDCY
LRDPLRKGEIFSYIHNLMSMPGYSPEEKQIVKDKGLQHIQELVILDPSKSADLVVFHYAK
EVQQIISELQDDQLLFKFLNCLLEPREGHHSGTNLALERDLHELLLGLQCRFAPQQLLSF
LQTSQHYRLEEAIQITQKYHHNEATAYLLEKKGDVHGAFAVLLETLKEKLNLLTAEGDRG
VERDGRPDKEENDSESTLMRVTDSLNNIIALCHRSSDNLYQQQREVLWFPLLETMMTSQK
LVKGLNAEHTFEVLKELTMKVLNCMSSFISLPAIIQRILQDPVYGKGKLAEIQGLILGML
DTFNYEQTLLETTTSLLNHDLHWSLAHLRAAVSRGLHPRQDHCNICLQLYKRRQDSAEEI
IVFSCGHLYHLHCLQQKDSGWGFSSEVQQRWRCYKCSSSQGGRGGLSTETKRGRSTSLAQ
TRVTSVYHDAGAEAHRKKVVVDATLDLQQEQSWDQLRCLYRGPSRLSILSELAHCHSNDK
TGLLIPGQPGTEIFQLKLSPPPLLEE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactctccggattcccgcagcctactctctgcttcatcacagctcaacctgatg
gagattgacgcaattgatgataaggaatttgacattccccaagttgacacacctcccaca
ctggagagcatccttaatgagctggaggatgaggaggaaccatttgtattagaggatacc
tgcgtgctaaacacagataacatggatgctcactcctgtgacacctcctctctggccagc
tcagacagtggagacccagcacatcttaaacgaaggaggaggacaatggatctgaatgcg
acggttcatgggtctgttcttcgacacagcctgctgaagggcatttctgcacagattgtc
tctgctgctgacaaagtggatgctggactgccaactgctataaccgtggctggtgtgatt
gctgtaggaacgtctcatggtctggctctggtctttggaaaagataccaatcaggctctg
cggctctgtctgggtaccaaggcaactggggcagagtttggagcggtctctgccctgagc
atcaaccacgattgctcaagacttctctgcgggtttgccaaaggacagattacaatgtgg
gatctagccagcgggaagctcctgagaacaatcactgatgcccaccctccagggacagct
atactacatgtgaagttcacagatgatccaactcttgcagtgtgcaatgacagtggagga
tcagtttttgagctggctttcaggagggtgatggggatgcggtcatgtgactctcgatgt
ctcttcagtggttctaaaggtgaggtctgctgtgttgaaccattgcgtgctcctccagac
ttcagagaccatcccatcacacactactctctgctggctatggcctctctcactaagatt
ctggtcattggactaaagccctcgctgaaagtctggatgactttcccatacagcaagtcc
gatccatccagtgttccccagctggcttggcagtttgttcctgttcagaagacggtcaac
cctatcctggctttttgtaaaggagatacagtctacttcctcttggtaaggaaggaggag
acggggaccatccatgtcatcaaacaaaaacaactccacctcagctgtgacatcattagc
ctgagttggattaacagtcgtacgctggtcctggtagacagccatgaaaagctgcaggtt
gtggaccggcccagtcaggaagtattggagactctggatttggagcaagtgcaactggtc
tataacagccgacatttcaaatcgctggcaactggagggaatgtctcacaggctctggct
ttagttggagaaaaggcctgctatcaatcagtctcaagctacgcaggacaacttgtctat
ttgggtaccaagtcggctcacattatggctctaaggaattggagagagcgtatagactgt
ttgctgaagcaggaacattttgttgaggctctctctctggcctggtccttccacgaggga
actgctaaggctgtggttggcttgtttggggagccagcaaaaagaaagggagtggtgggt
gacaagatggtagagatcctgttccagtttgcagagcatgctttgaagaagtgtccagaa
caaggcaagatccaagtgatggagcaacatttccacgatgtggttccagtcctggtggac
tactgcctgctgctaaagaggaccgacctgatgtttaaccagctgtattctcggctggtg
ngaaacatggtagctaagggtgtctttctagagtcattggagtgtacattgttgcggaac
nngctcggtcacctcaccacgcccgtcatgaaggacctccctttccatntacatggcaat
ggcatgatggacagcctgnngagatgcattgtccatctggatgtgaccagcctggacata
caacaggtggttcaagtgtgttgggagaaccaactctatgatgcaatgatctacgttttc
aacagcagtatgaatgactacattacaccgatggagaaactctttgcagtgattggccca
ccacttagagctgggaggggtctaacagatgaggaagtggtgatgggaaacaaacttttg
gtgtacataagtgtgtgtgtgtgtggaagggcatatccactaggaaacatccctgaagac
cttgtggttcaagtcaagaaccaggtgtttgagttccttatccgtcttcattcagccgat
tcgttagaggaggaggatgttttcccgtatattcgtacactcctccactttgatacccgg
gagttccttaatgtccttgccatgacatttgaagactttaagaatgataagcaggccctt
gagtaccagcagaggatagtggacatcctacttcaggtgatggtggacaacccagacttc
actccatcccaggtgggcgggctcttcacctttttggcccgccagttggccaagccagac
aacacactttttgtgaacagaaagctctttgatcaggttctggagttcctgtgttgccca
gacgatgactcccgacatactgagaggcagcaggttctgctggagctgctgcaggttggc
ggtgtggtacagtttaatgaagaaaggctgttggctttggcagagaaagctaagttctac
caaatctgtgaatttctttatgagaagaaacatctgtatgacaggatcattgactgctat
ctgagagaccccctcagaaagggggaaatcttcagctacatccacaatctgatgtccatg
cctggctacagcccggaggagaaacagatagtcaaggacaaaggactgcaacacatacag
gagcttgtgatccttgatcccagcaagtcagctgacctagttgtgtttcactatgctaaa
gaggtgcagcaaatcatctctgagcttcaggatgaccagctacttttcaagttcctcaac
tgcctcctggagccacgggaaggccatcattcagggaccaacctggctctggaacgtgac
ctccatgagcttctgctaggcttacagtgccgctttgccccccagcaactcctgagcttc
ctgcagacctcccagcactacagactggaggaggccatacaaataacacagaagtaccac
cacaatgaggctacagcctatctgctggagaagaaaggagatgttcatggagcttttgct
gttttgttagagacattgaaggaaaaactaaatctccttactgctgagggtgacagagga
gttgaacgagatggaagaccagataaagaggagaacgacagtgaatcaacactgatgaga
gtaacggattcactgaataacatcattgccttgtgtcatcgaagctctgacaacctatac
cagcaacaaagagaggttctatggtttccattgctggagacaatgatgacttctcaaaaa
ctagtaaaggggctcaatgccgaacatacatttgaagtgctgaaggagctgacgatgaag
gttctcaactgcatgagcagctttatttctctgcctgccatcatccaacgaatactgcag
gacccagtctatgggaaaggaaagctggcagagatccaaggccttattctgggtatgctg
gacacttttaactatgaacagactttacttgaaaccaccaccagtctgttgaaccatgac
ctccactggtccctggctcacctgcgtgctgctgtctcaaggggacttcacccacgacaa
gaccactgtaacatctgcctccagctttacaagaggaggcaggactcagctgaggagatc
attgttttcagctgtggccacctgtaccacttacactgcctgcagcagaaggactctggg
tggggctttagttcagaggtgcaacagcggtggcgctgctacaagtgttcctccagccaa
ggaggaaggggcgggctttccactgagacaaaaagaggccgcagcacgtccctggcacag
actcgtgtaacatcagtgtatcatgacgcaggagcagaggctcacaggaagaaggtggtt
gttgacgcaacattagaccttcagcaggaacagtcctgggatcagctacgctgtttatac
cgaggaccatccaggttgtccatcctttcagaacttgcccactgccatagcaatgacaag
acagggcttctaattccaggtcaaccaggaacagagattttccaactgaaactctctcct
ccacccttgttggaagagtag
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integrated database retrieval system
