Etheostoma spectabile (orangethroat darter): 116696522
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Entry
116696522 CDS
T08457
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04020
Calcium signaling pathway
esp04510
Focal adhesion
esp04518
Integrin signaling
esp04540
Gap junction
esp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116696522 (pdgfc)
04020 Calcium signaling pathway
116696522 (pdgfc)
09133 Signaling molecules and interaction
04518 Integrin signaling
116696522 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116696522 (pdgfc)
04540 Gap junction
116696522 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116696522 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
esp04052
]
116696522 (pdgfc)
Cytokines and neuropeptides [BR:
esp04052
]
Cytokines
Growth factors (RTK binding)
116696522 (pdgfc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
116696522
NCBI-ProteinID:
XP_032383466
LinkDB
All DBs
Position
10:7930417..7980423
Genome browser
AA seq
342 aa
AA seq
DB search
MILPLIFLLASLLQQYGSEAESSNVSKFHPPSVKEQNGVQDSHQEKTITVSGEGMVHSPD
FPNTYPRNTALVWKLVATNNMRIQLTFDDRFGLEDPEDGICKYDFVEIEDPTEKTILGRW
CGSQSAPASHTSKGSQIRIRFFSDEYFPTEPGFCIRYSLLPVSVSEPEVPAVLPASQQGI
EELSEAVAGLGTMEEVLQYLEPERWQLDMEELYKPTWHVLGKSFIHNKKARGGADLNLLR
EDVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCYDCQCVPTRVT
KKYHEVLLLKHRSGVRGLQKSMTDVPLEHHEECACVCKDDWD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatccttccattaatattccttcttgcatcgcttctccaacaatatggctcggaagct
gaatcaagtaatgtcagcaaatttcaccctccaagtgtaaaggagcaaaacggagtgcaa
gattcccatcaggagaagaccataacagtgtctggagagggaatggtccacagcccagac
ttcccaaacacttatcccaggaacaccgcgttggtctggaaactagtggcaaccaataac
atgagaatccagctcacctttgatgacaggtttggtctggaggaccctgaagatggcata
tgcaaatacgactttgtggagatagaggatccgactgaaaagaccatcctgggtcgctgg
tgtgggtcacagtcggcaccggctagtcacacttccaaaggcagtcagatcaggatccgc
ttcttctctgatgagtacttccccactgagccgggattctgcatccgctactcccttctg
cctgtgagtgtatcagaacccgaagtccctgcggttctccctgcatcccagcagggtatt
gaggagttgtcagaggctgtggcagggctgggcaccatggaggaggtcttgcaatacctg
gagccggaacgatggcagctggatatggaggagttgtacaaacctacatggcatgtgctg
gggaaatccttcatccataataagaaggccagaggaggagctgatctcaatctgttgagg
gaggatgttcgactgtacagctgcactccacgcaacttctctgtatccttgcgtgaggag
ctgaagaggacagatgccattttctggccaagctgcctcctggtgaagcgctgtggtgga
aactgtgcctgctgctctcaccgctgctatgactgccagtgtgttcccaccagggtcacc
aagaaataccatgaggttctactgttgaaacaccgaagcggtgtcagaggcttgcagaag
tctatgactgatgtgcccttggagcaccatgaggagtgtgcctgtgtgtgtaaagatgac
tgggactga
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