Etheostoma spectabile (orangethroat darter): 116696578
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Entry
116696578 CDS
T08457
Name
(RefSeq) protein transport protein Sec24B-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116696578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116696578
Membrane trafficking [BR:
esp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116696578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
DUF3246
HpaB
Motif
Other DBs
NCBI-GeneID:
116696578
NCBI-ProteinID:
XP_032383544
LinkDB
All DBs
Position
10:5417363..5440691
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AA seq
1223 aa
AA seq
DB search
MSAPGFTNLNSSVSYSQNSTPNGGAAPPYQNGPTQTYQSIHPTTGCYGAPPQQQNCPTIP
AHSTPVPNKAPITNSAHSANYYQSIHHQQQQQKPQQKPQQQHRLSQHHVAPSPYSAPSSS
APPSQPYATLPSSAPPPSNAHYNQQPFQQQHHPPYANPGSYYGQQSYPTPPAQHSQQQQQ
QQQQQQQHSLVSAPSSGPGAPIYPIVSYPSAPGSSQYGTLSSSQSTLKHGVMPTQMGAPL
HQYSPSWPASTTAVQPGHSVAPPCELAPTVDGQGSTVHQHYDQSHRASLSYDSYGGVIHS
SGGADRPPSGTPSTPVHSSPGHHQGMQYGYVANSGASSASATTSGPAAAPSSCSSEDDDD
DDDEEDEEAGGDTSSSTTGSASPVPNSYDSLEGGSYPDSMPPSNDVTNQAAPYGSYSYPS
MQPDYPQGPASHTGSSPSCVPYGQSSYQQYSQPFPNLSQLSAALGGLSGVPELEVEALSP
INLLLERNLLPPRPLEAPEPNLSPDLKKVNCSPQTFRCTLTSIPQNQALLNKARLPLGLL
LHPFRDLQQLPVITSNTIVRCRSCRTYINPFVTFLDQRRWKCNLCYRVNDVPDEFMYNPV
TRSYGEPHKRPEVQNATVEFIASSDYMLRPPQPAAYLFVLDVSHNAVESGYLKFFCESLM
DNLDKLPGDTRTRVGFLTFDNTIHFYNLQEGLSQPQMLVVSDIDDIFIPSHDSLMVNLKE
SKELVKDLLTSLPGMFSQTKETHSALGPALQAAFKLMSPTGGRVTVFQTQLPTLGAGSLQ
SREDPNQRSSTKGVQHLGPATDFYKKLALDCSGQQIGVDLFLLSSQYVDLASLACISKYS
AGSIFYYPSFHYIHNPAQLEKFQKDLDRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVR
STDLLSLANVNPDSAFAVQMSIDDSLADSSLACFQAALLYTSSKGKRRIRVHTLCLPVVN
QLSDVYAGADVQAITCLLADMAIDRSITSSLSDARDALTNAVVDLASAYKSNVSNLQQSG
LVFPAALCLFPIYILSLLKQKALRTGTSTRLDERVFAMCEFKTQPLQQLMRMVHPDLYRL
DNISDQGALHLNNTVIPQPPLLHLSAETLSRDGAFLMDCGNTFYLWIGKCCHDLFIRDVL
GCPDYASIPTNMSHIPELGTPLSKRVRAFLDWLQDNRAFSSMIHVVKDDTSAKATFFQYL
VEDQSESASSYQEFLQHIQAMSK
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgccggggttcacaaatctgaacagttccgtcagctatagccagaactcaacg
ccgaacggtggagctgcgcccccataccagaatggtccgacacagacataccaatccata
catccaacaacaggctgctatggagcaccacctcaacaacagaactgccccaccatccct
gcccactctactcctgttcctaacaaagcacccataacgaacagtgcccacagtgctaac
tactatcagagcatccatcatcagcaacaacagcagaagccacagcagaagccacagcag
cagcaccgactctctcagcatcatgtagcaccctccccatacagtgctccctcaagctct
gctcctccttctcagccgtatgccactctcccctcttcagcaccaccaccatcaaatgcc
cactacaaccaacaaccattccagcagcagcatcacccaccatatgccaatccaggatcc
tactatggacagcagtcataccccacccccccagcacagcactctcaacaacaacagcag
cagcagcagcagcagcagcagcatagtttggtgtctgcaccatctagtggccctggagct
cccatctacccaattgtttcgtacccgtctgctccaggaagtagccagtatggcacccta
agttcctcccagagcaccttgaagcatggagtcatgcccacccagatgggtgcgccccta
catcagtacagtccctcttggcctgcctccacaacagcagtgcagcctgggcacagtgtg
gctcctccttgtgagctggcaccgacagttgatggtcaaggaagcacagtccaccaacac
tatgaccagagccatcgggcttctctgagctatgactcctacggcggggtcattcacagc
agtggtggcgcagaccgaccgccttcaggaaccccctccactccagtccattcctcgcca
ggccaccaccaaggcatgcagtatggatatgttgctaatagcggagctagctctgcctct
gccaccacctcaggcccagccgcggccccctcatcatgcagctctgaggatgatgatgat
gatgatgatgaggaggatgaggaagcaggtggcgacacttcctcctccactactggtagt
gcctctccggtgcccaacagctatgattccctggaagggggcagctatccagattctatg
ccgccctccaacgatgtgaccaaccaggccgcgccctatggaagctatagttaccccagc
atgcagccagactatccccagggacctgcctcccacactggctcttccccctcctgtgtt
ccatatggccagtcaagctaccagcagtactcgcagccattcccgaacctgtcccagctg
tctgcggcccttggggggctaagtggggtgccagagctggaggtggaggcactgagtcca
atcaacctgctgctggagaggaacctgctaccccccaggccccttgaagcccccgaacct
aacctcagccctgacctcaagaaggtcaactgtagtccacagacattcaggtgtaccctg
accagcatcccccagaaccaggctttactcaacaaagccaggctccctctgggcctcctc
ctccaccccttcagggacttacagcagttaccggtgatcacgtcgaacacaatagtgcgc
tgtcgctcctgtcgcacctacatcaatccgtttgtcaccttcctggaccagcgcaggtgg
aagtgcaacctctgttatcgggtcaatgatgttccagatgagtttatgtacaatccagtc
accaggtcgtatggcgagccccataagagaccagaggtccaaaacgccactgtggagttc
atcgcttcctcagactacatgctgcggccccctcagccagcggcctacctgtttgttctc
gacgtgtctcacaatgctgtggaatcaggctaccttaagttcttctgtgaatcacttatg
gacaacctggataagttgcctggggatacacgcaccagagtgggcttcctaactttcgac
aacaccatccacttctacaacctccaggagggactgtcccagccccagatgctggtggta
tcggacatagatgacatctttataccttctcatgacagtctaatggtgaacctgaaggaa
agcaaggagctggtgaaggaccttctgacatcactgccgggcatgttcagccagaccaag
gagacccacagcgccctcggcccggcattacaagcagctttcaagctcatgtcgcccacc
gggggccgtgtcacagtgtttcagacgcagctgccgacgctcggtgccggttcgctgcag
tcgagggaagaccccaaccagcgctcgagcactaagggagttcagcaccttggcccagcc
acagacttctacaagaagctcgcactggactgctcagggcaacaaattggggtggatctt
ttcctgctcagctcccagtacgttgaccttgcttcgctagcatgcatctccaagtattca
gcgggcagcatcttttactacccctccttccattacatccacaacccggcgcaattggag
aagttccagaaggatctggaccgttacctcactaggaagattggctttgaggcggtcatg
agaatacgatgcactaaaggtttatccatccatacgttccacggtaacttctttgtgcgc
tccactgacctgctgtccctggccaatgtcaacccggattctgcctttgctgtccagatg
tctattgacgactcactggcagactcgtctttggcctgcttccaggctgctctgctctac
acctctagtaaaggaaaaagacgaatccgggtccatactctgtgtctgccggtggtcaac
caactgagtgacgtgtatgctggagctgatgttcaggccatcacttgtctgctagccgac
atggctattgaccggtcgataacgtccagcctgtccgatgctcgggatgccctgacgaat
gcggtggtggatctggcgagcgcctacaagagcaacgtgtcgaacctgcagcagtccggc
ctcgtctttcctgctgccttgtgcctcttccccatttacatcctctctctgctcaaacag
aaagctttgcggacaggcaccagcacgcggctggacgagcgggtctttgccatgtgtgag
ttcaagacgcagccgctgcagcagctgatgcgaatggttcatcctgacctgtaccgactg
gacaacatctctgaccagggggcgctccatctgaacaacacagttattcctcaacctcca
ctcctccacctgtctgcggagacattgagcagagatggagctttcctcatggactgtggc
aacactttttatctgtggattggcaagtgctgccacgatttgttcatccgagatgttctt
ggctgccccgactacgcttcaatacccaccaacatgagtcacattcctgagctggggact
cctctgtctaagagagtgcgagcgtttctcgactggctgcaggacaaccgagcgttcagc
tccatgatacacgtcgtcaaggacgatacttcggctaaagctacttttttccagtacctg
gtggaggatcagtctgagtcggcttcttcctaccaggaattcctgcagcacattcaggca
atgtccaagtag
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integrated database retrieval system
