Etheostoma spectabile (orangethroat darter): 116696579
Help
Entry
116696579 CDS
T08457
Symbol
ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116696579 (ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
116696579 (ncbp1)
03015 mRNA surveillance pathway
116696579 (ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116696579 (ncbp1)
03041 Spliceosome [BR:
esp03041
]
116696579 (ncbp1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
116696579 (ncbp1)
Spliceosome [BR:
esp03041
]
Common components
Common spliceosomal components
Cap binding complex
116696579 (ncbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
RRN3
Apolipoprotein
DUF1690
Vfa1
AAA_11
Importin_rep_6
FapA
Phage_Gp23
PHM7_cyt
GBP_C
DUF1664
Motif
Other DBs
NCBI-GeneID:
116696579
NCBI-ProteinID:
XP_032383546
LinkDB
All DBs
Position
10:complement(5400427..5411087)
Genome browser
AA seq
797 aa
AA seq
DB search
MSRRRHSDSENEGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEA
DLPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNN
LYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPW
VGKELYEKKDVEMDRLLSQIEGYLKGRGKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKL
KKDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPRVVFRMFDYTDAPE
GPVMPGSHSVERFVIEENLHCIIQTHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGEL
FQLPSPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTSCVDRLINWFSH
HLSNFQFRWSWDDWSDCLTMDLEKPKPKFVKEVLEKSMRLSYHQRIVDIVPPTFAALIPA
EPIFSYKYEDESASSLPGYQASVTVGNAIKNRASNEEILNILKEVPNPNQEDDDDEGESF
NPLKVDVFLQTLLHLAAKSFSHSFSALGKFHEILKALTESDEGKLHILKVVYDVWRNHPQ
MIAVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLFIWEILHSTIRKMDKHVQKIQQEL
EEAKDKLEKQQHKRQKDSGDDEDMDKNSEDEEGQLEEQIERLQEKVESAQSEQKNLFLVI
FQRFIMLLTEHLVRCETGSVDITTPWYKNCVERLQQVFLMHHVTIQQYMGTLENLLFTAE
LDHHILAVYQQFCALQL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggagacgacacagcgacagcgaaaatgagggaggtcaggcacataaaagacgg
agaacgtctgagcccattgaaattgaagaccgcctggagtccctgatatgtcgtgtagga
gagaagagtacatcgtccctggagagcaacttggagggccttgcaggcgtgttggaggct
gaccttccaaactacaaaaacaaaatcctgcgcattttatgtgctgttgctcgcctccta
cctgagaagctgaccgtgtatacgactttagttggcctcttgaacgccaggaactacaac
tttgggggcgagtttgtggaggccatgatcagacaactcaaggagacactaaaaaacaac
ttgtacaatgaagctgtttacttggtgcgtttcctgtccgacttggttaactgccatgtg
attgctgctccttcaatggtggccatgtttgaaaactttgtcagtgttactcaggaggaa
gatgtaccacaggttcggtcggactggtttgtgtatgtggtgctgtcctgtctgccctgg
gtcggtaaggagctttacgagaagaaggatgttgagatggaccgacttctcagccagatc
gaaggctacctcaaggggcgaggaaagacacacgtccccatgctgcaggtgtggacggca
gagaagccccacccacaggaggagtacctggactgcctttgggcccagatacagaagcta
aagaaagaccgctggcaggagcgccacatccttcgtccatacattgcttttgacagcgtg
ctctgtgaggccctgcagcacaacctgccccccttcactcccccgggccacatgcccgac
gcccagtaccccatgccccgggtcgtcttccgtatgttcgactacaccgatgccccagag
ggtcccgttatgcccggcagtcattctgtggagagatttgtcatagaagaaaacctgcac
tgtatcatccagactcactggagagagaggaagacatgcgctgcccaattacttagctat
ccagggaaaaataagatcccactcaactatcacattgtggaggtgatctttggagaactt
ttccagctgccatctccccctcacatcgacgtcatgtacaccacactgcttattgaactg
tgcaagctgcagcccggatcattgccacaagtcttggcccaagccacagagatgctgtac
atgaggctggacaccatgaacaccagctgcgtagacagactaatcaactggttctctcat
catttgagcaacttccagtttcgatggagctgggatgactggtctgactgcttgaccatg
gatctagagaagcccaagcccaagtttgtcaaagaggttctggagaagagtatgagactt
tcataccatcagcggatagtggacatcgtccctccaaccttcgcagcactcatcccagcc
gaacccatctttagttacaaatacgaagacgagagcgcttcttcgttacccggttaccaa
gcatccgtcactgttgggaacgccattaagaaccgagcgtccaacgaagagatcctaaac
atcctcaaagaagtgcccaaccccaaccaagaagacgatgacgatgagggcgagagcttc
aaccctctgaaggtggacgtgttcctgcagactctgctccacctggccgccaaatccttc
agccactccttcagtgccctcggcaagttccatgagatcttgaaggccctgacggagagc
gacgaggggaagctgcacatcctcaaggtggtctatgacgtgtggagaaatcacccgcag
atgatcgcagtgttggtggacaaaatgattcggacgcagatcgtggactgcgccgctgtg
gccaactggctcttctctcaggatatggctcatgagttcaccagacttttcatctgggag
attcttcactcgaccatccggaagatggacaaacacgtccagaagatccagcaggagttg
gaggaggccaaggacaaactggagaaacagcagcataagaggcagaaggacagcggggac
gacgaggacatggacaagaacagcgaggacgaggagggccagttggaggagcagatcgaa
aggctacaggagaaggtggagtcggctcagagcgaacagaagaacctcttcctcgtcatc
ttccagcgctttatcatgttgttgacggagcatctggttcgctgtgagacgggcagcgtc
gacatcaccacgccctggtacaagaactgtgtcgagcggctgcagcaggtctttctcatg
caccacgttaccatccagcagtacatgggaaccctggagaacctgctgttcaccgccgag
ctcgaccaccacatcctggccgtgtaccagcagttctgtgccctccagctctga
DBGET
integrated database retrieval system
