Etheostoma spectabile (orangethroat darter): 116696602
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Entry
116696602 CDS
T08457
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04371
Apelin signaling pathway
esp04514
Cell adhesion molecule (CAM) interaction
esp04517
IgSF CAM signaling
esp04518
Integrin signaling
esp04519
Cadherin signaling
esp04520
Adherens junction
esp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116696602
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116696602
04517 IgSF CAM signaling
116696602
04518 Integrin signaling
116696602
04519 Cadherin signaling
116696602
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116696602
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116696602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116696602
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116696602
04090 CD molecules [BR:
esp04090
]
116696602
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116696602
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Major cadherins
116696602
CD molecules [BR:
esp04090
]
Proteins
116696602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_FAT4_N
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
116696602
NCBI-ProteinID:
XP_032383572
LinkDB
All DBs
Position
10:complement(24280138..24308865)
Genome browser
AA seq
659 aa
AA seq
DB search
MGTAGLAVLGILIVVFQASALVANEEPTCVPGFESDMLIYKVSRKHLKKNTRLGKVGFTD
CTDRTRFVFSSDNSHFMVQTDGILKVKRPTDIHGHREFIIHVWDSQGYKISVPVRVLHHL
HHHESHHQNAEHNHQHPHTEVEYANNTESATGQQVPILQFPKSVDGLRRRKREWVIPDLT
VVENDRGPYPLKVSQIRSNADKVKKIFYSITGPGADEPPVGLFTMDRNTGTLYLTQPLDR
EDKDKYMFQAHAVADGSGNAEAPMDIIVKVIDQNDNKPTFTQSTFLGEVAEASPKGFEVI
KVVATDIDQPNTDNSDIRYSIMSQDPVLPSDFLFVINPVTGVIRVNAGGLDREKYPKYTL
VVRAADTVGEGLIGEAKVILTVTDSNDNAPAFIQPSYLAAVDENKVNAQILTISVTDGDE
PHSPAWNAKFRIVDGDPGGLFTVKTGSNKHEGIISTAKGLDFEKSNTHTLLIAVENEVPF
AIPLPTATATVLVTVQDVNEAPVFDPLEKHVLIRVDFASFKALKTSLPADYSHLHTHSNI
TSPTAHTCQSSTIKPTIISIPRCCLQSAGFTTWFPSHGSLLLPASTPASSLPLFDSSVPR
TSVPPQPRFPCTPQAPLLSYSSPQVPRHPTPALVSLFLFLASATPHLPFLNVQRAFQAT
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgctgggctcgcggttttgggcattttaatcgtcgtttttcaggcctctgct
ttagtggctaatgaggagccaacatgtgtacctggatttgagtcagacatgctgatttat
aaagtgtccaggaagcacctgaagaaaaacacaagactgggaaaagtgggcttcactgac
tgcacagaccgcacaagatttgttttcagcagtgataacagccatttcatggtacagaca
gatggcatattaaaggtaaaaagaccgactgatattcatggacaccgggaattcattatc
cacgtctgggactcacaaggttacaaaataagtgttcctgtcagagttttgcaccatttg
catcaccatgagagccaccaccaaaatgctgagcacaaccatcaacatccccatactgaa
gtggaatatgctaataacacagagagtgcaactggtcaacaggtgcccattctgcaattt
cccaagtcggttgatgggctgaggaggaggaagagagaatgggttattccagacctcact
gtcgttgagaatgaccgaggaccctaccccctaaaagtatctcaaatccgttctaatgcg
gataaagtcaagaagatcttttacagcatcactggtccaggagctgatgagcctcctgtt
ggtcttttcaccatggacagaaatactggtactctgtatctcacacaaccactagacaga
gaggacaaagacaagtacatgtttcaagcccatgctgtagcagatggttcaggaaatgct
gaggcccctatggatattatagtgaaagtaattgaccagaatgacaacaaacctaccttt
actcaaagcacttttctgggagaagttgctgaggcctcaccaaaaggttttgaggtgatt
aaggttgtggccacagatattgaccagccaaatactgacaactcggatatccgctacagt
attatgagccaggatccagtgttacccagtgactttctgtttgttatcaacccagtcaca
ggagtcatcagagtcaatgcgggtggcctagacagagagaaataccccaaatacactctg
gtggtacgagcagcagacactgtgggagaaggattgattggagaagcgaaagtaatcctt
actgtcacagatagcaacgacaatgctccggccttcattcagccgtcgtatttggcagca
gttgatgaaaataaagtcaacgctcagatcttaacaatatcagtaacggacggtgatgaa
ccacattccccagcctggaacgccaagttcaggattgtcgatggtgatcctggaggactt
tttacagtgaaaacaggaagtaacaaacatgaaggaatcatttctactgccaagggtctt
gactttgagaagagcaacacacacacgttgttgattgcagtggagaatgaggttcctttt
gctattccactgcccactgccaccgccacagtgttggtgactgtgcaggatgtcaatgaa
gctccagtttttgatccactagagaagcatgtgttaatacgggtggactttgccagcttc
aaagcattgaaaacatcactgccagctgactactcacacctgcacacacattccaacatc
acctctcccaccgcacacacctgccagtcatccacaatcaagcccaccatcatctccata
cctcgttgttgtctccagtcagctggcttcaccacttggttcccttcacacggctccctg
ctccttcctgcctccactcctgcttccagccttcccctcttcgactcctctgttcccagg
acttcagtgcctcctcagcccaggttcccctgcactccccaagcacccttgttatcctac
tccagccctcaggtccctcgccatcctacaccagccctcgtgtccttgttcctgtttttg
gcatccgccaccccgcaccttccttttcttaacgttcagagagcctttcaagccacataa
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