Etheostoma spectabile (orangethroat darter): 116696710
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Entry
116696710 CDS
T08457
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03420
Nucleotide excision repair
esp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116696710 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
116696710 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116696710 (cul4b)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116696710 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116696710 (cul4b)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
116696710 (cul4b)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
116696710 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
116696710 (cul4b)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116696710 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
116696710
NCBI-ProteinID:
XP_032383724
LinkDB
All DBs
Position
10:complement(12370920..12381314)
Genome browser
AA seq
866 aa
AA seq
DB search
MFPTGLSTPNPPPPPTQEARTAATDVKNDSGNITSPKKRKINGSEREDTSDTISSSPPKT
LNSSSSSSSSSPCSPTSLHIQKKLRFEDSVDFIGLDVKMAEEAAAAASCSNNKSKAVFLP
GGVGHHANGLTKPAGSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAI
QNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLFLK
KIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTI
DGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQQ
REVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDE
NRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVD
HVIDICFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKML
DKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEG
MFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEI
FKTFYLGKHSGRKLQWQSTLGHCVLKAEYKEGKKELQVSLFQTLVLLMFNEGEEFTLEEI
KLATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQ
MKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLK
KRIESLIDRDYMERDKENPNQYNYVA
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatctacccctaatcccccaccaccgccgacccaggaggctaga
actgcggctactgatgtcaaaaacgacagcggtaacattacatctccgaagaagaggaaa
ataaacggctcagagagggaagacacttctgacacgatatcttcctcgcctcccaagacc
ctgaattcctcctcttcttcatcctcctcctccccctgctctcccacttcgctgcacatc
cagaagaagttaaggtttgaggattcagtggatttcattggcctggatgttaaaatggct
gaggaggctgctgctgctgcttcgtgctctaataacaaaagcaaagccgtgttcctgccc
ggtggtgtgggacaccatgcaaacggactgaccaaacccgcaggatccggcaccttttct
aacagtaaacccggtgctgcaaagaaactagtcatcaagaacttcaaagaaaagcccaaa
ttgccagagaactacacgcaggagacctggcagaagctgaaggaggcagtggaggccata
cagaacagcacttcaattaagtacaatctagaggaactctatcaggctgttgagaacctg
tgctcccataagatatctgccaaactttacaaacagctgagggccgtgtgtgaagaccac
atcaaggcacaaattgatcaattcagagaggacgccctggacagtgtgcttttcctaaag
aaaattgacaagtgctggcaagatcactgcagacaaatgatcatgattaggagtatattt
ttgtttttggaccgcacctatgttttacaaaattcaatgctgccatcaatctgggacatg
ggtctggagctgttcaggttctacatcatcagtgatctgaaggtccagagtaaaactatc
gacgggattctgctgcttattgagagggagcgaaatggagaggcgatagaccgcagtcta
ctgaggagcctgctgagcatgctctctgacctgcagatttatcaggactcttttgagcaa
cgctttttggaggaaactaatcggctgtacgctgcagagggacagaggctgatgcagcag
agagaggtcccagaatatctccatcatgtcaacaagcgcttagaggaggaggctgacaga
gtcatcacatatctggaccagagcacacaaaaaccgctcattgctaccgtggagaagcag
ttgctgggtgaacatctcacggctactctgcagaaagggctgactcacctgctggatgag
aacagaattcaggatctgtctcttctctatcaactcttcagtcgagtgcgaggtggcgtc
caggtcctcctgcagcactggatagagtacataaaggcttttggaagcacaatcgtaata
aatccagaaaaagacaaaacaatggtgcaagagttgcttgacttcaaagacaaggtggat
cacgtcatcgacatatgcttcatgaagaatgagaagtttgtcaacgccatgaaggaggct
tttgaaacattcatcaacaaacggccaaataaacctgcggagctcatagcaaaacatgtg
gattcaaagctaagggcaggaaacaaagaagcaacagatgaagaactggagaagatgctg
gataagatcatgattatttttagattcatctatggaaaagacgtttttgaggccttttat
aaaaaggatctggccaagaggttgctggttggaaaaagcgcctctgtagatgctgaaaag
tcgatgttgtcaaagctgaaacatgaatgtggagcagcgttcaccagcaaacttgagggg
atgttcaaggatatggagctttctaaagacatcatggtgcagttcaaacagtatatgcag
tgccaaaacattcctggcaacattgagctgacggtgaacatcctcacgatgggttactgg
ccaacctatgtcccgatggaagtgcacctgcctcctgagatggtgcgactgcaggagatc
ttcaagaccttctacctgggcaaacacagtggcaggaagctgcagtggcagtcaacactc
ggccattgtgtcttaaaagctgaatataaagagggcaagaaggagctgcaggtgtcactt
ttccaaacacttgtgctactgatgtttaatgaaggcgaggagttcaccctggaggagatc
aaattggcaacaggaatagaggacagtgaactgcgccggactctgcagtcacttgcttgt
ggaaaagcacgtgtcctcaccaaaatccccaaaagcaaagatgtggaggacggggataag
ttttcctgcaatgatgacttcaaacacaagctcttcaggatcaaaataaaccagatccag
atgaaagaaacggtggaggagcaagccagtaccacagaacgggtgtttcaggatcgtcag
tatcagatcgatgctgccatcgtgagaatcatgaagatgaggaagactctgagccataat
ctcttgatgtctgaagtgtacaaccagcttaaattccccgtcaagccagcggacttgaag
aagaggatagagtctcttattgacagggactatatggagcgggacaaggagaaccccaac
cagtacaactatgtggcttag
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