Etheostoma spectabile (orangethroat darter): 116696773
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Entry
116696773 CDS
T08457
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116696773
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116696773
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116696773
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116696773
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Protocadherins
116696773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
116696773
NCBI-ProteinID:
XP_032383822
LinkDB
All DBs
Position
10:15520148..15646565
Genome browser
AA seq
1267 aa
AA seq
DB search
MDLVSKADVLVVLLTCMVLLCRAQERDYTVKEEQPENVRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFAEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPVFKDSELEVSVPENAPMGTSVAQLHASDADLGSNAQIHFAFSNQISASTKRHF
SIDSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDGDSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAIITLSVLNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVLPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSII
ITSRVSPRGLFAIEKTTGNITLQEKIVTADQGLHRLVVKVKDLGQPESLHAIALIHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQDNRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQNLSQ
TPEISFNSPPPICPHKEACQLGKITSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSSTAS
TTQPLPLSFPHEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGH
SDSCWMPPALAQFQGPGSNSPTSTPITTAITGTMPSFGFQQSCARGAKANMVSIGVMDGR
HTLGRSVPKKDELDKGINRPQFYNTLDRHCSKKEDPIKVIPLASFSSPGQQTPTGGGSSS
FLHEHQL
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggacttagtaagtaaggctgatgtgctggtggtcttgctcacctgtatggtcttgcta
tgccgggcccaggagagggactacacggtaaaggaggagcagccagagaacgtccgcatt
gggaacctgcgcaaggacctggacctcaaccttgaccccaacatcaggctttcctcacca
ctgcagttcaagcctgtgtacaagacaggtgacgtgcctttggtgagggtggaggccaac
acaggggagatctttaccaccaatcacagaattgaccgggagaagctgtgctcaggggtc
ttcgctgagaaacgctgctactatgagattgaagtggctgtactgccggatgagatcttc
cgattggtcaagatccgcttcctgatcgaggatgtaaatgacaacgcaccccttttccag
tccactgtaataaacatatccatcccggagaacacagccatcaacacccgatacccggta
ccctcagcatttgaccctgatgtagggatcaatgggattcaacattatgaactggtcaag
agtgtcagcgagtttggcttagacatcatagagactcctgaaggtgacaagtggccacag
cttattgttcagcagaacctggatcgtgagcaaaaggacacatttgtcatgaagataaag
gtagaggatggtggcaaccctcccaagtccagtactgccatcctccaagtcaccatctcc
gatgtcaacgacaatcgtcccgtcttcaaggacagtgagctggaggtctcagtgccagag
aatgcccccatggggacatcggttgctcagcttcatgcctcggacgcagacctgggttct
aatgctcagatccacttcgccttcagcaaccagatctctgcctcaaccaaacgtcacttt
tccatcgacagctctacgggactgatcactgtgaagcagccactggacagggaggtaact
cctgttcacaaactcatcgtccttgccagtgatggcagctccaccccctccagagccaca
gtaatagttaatgtaacagatgtaaatgacaatgttccctccatagacactcgctacatt
atcaacctggttaatgggactgttctgctgtctgagaatgcacctctcaacaccaaaata
gccctcatcactgttactgacaaggatgcagatctttatggcaaagtagcttgctacact
gaccatgatgttccttttcggttgaagcctgtctttaatgatcaattcttactagagacg
gctgcccccctagattatgagacaactcgagaatatgcaattaagatagtggcctcggat
aggggaacgcctcctttgaacacttcagctatggttttaattaaaatcaaggatgagaac
gacaatgcacccatcttcccccagccggaaatccaactttctataccggagaacaatgac
ccctctacacagttaataaaaatcagcgccactgacggagacagcggacataatgctgag
attatttatactcttggccctgatgcacctgacgggtttaacatagacagacggtcagga
attctctccgttggcaagcgactggacagagagaagcaggagaggtactcattcactgtc
atagcgagggacaatggctccacgtccctgcagagcaatgtcactgtcaggctaatcgtc
caggaccttaatgacaacagcccagctttcacacaccctgagtacaacttctatgtgcct
gagaacctgcctctctatggaactgtgggcttaatcacagtgacggatgcagatgcagga
gataatgccattataaccctgtccgttttgaatgggaaggataatttcatcattgacccc
caaaccggtgtgatcaaaccaaatatcacctttgatagggagcagcaaagctcctacaca
tttatggtcaaggcagttgatggagggcaacctccaagctcctcctatgccaaggtcact
atcaatgtagtcgatgtgaacgacaatcgccctgtgttcgtcctcccatcctcaaattat
tcatatgacctagtgcgaaccaccaccacacctggagctgtggtcaccagagtgtttgcc
attgacaatgacacaggtatgaatgctgagctgcagtacagcattatcagcagcatcatc
atcacatctagggtctcccctcgaggtctcttcgccattgaaaaaacaacgggtaacata
acactccaggagaaaattgtgacagctgatcaggggctgcataggctggtagtcaaggtt
aaagatttaggccagcctgagtcattacatgctatcgcacttattcacttgtttgtcaat
gacactgtgtcaaatgctacctttatccaagagcagctgcgaaaaagtatggagactccc
ttggatcgtaacataggggacagtgaggtaacacctcaagccaacggatatgtgattgtt
gtcatagcaatcatagcagggaccatgactgtcatcttggtgatatttgtgacagccttg
gtgcgctgccgacagacacccagacataaagtggtacagaagggcaagcagagtggtgag
tgggtgtcacccaaccaagacaaccgtcagatcaagaagaagaagaagagaaagaagcga
tcccccaagagcctcctcttgaactttgtgaccatagatgaatccaagcctgacgacccc
acccatgagcatgttaatggtacactggatctccctgtggagttagaggagcaaaccatg
gggaagtacaactgggccaccacgcccaccacattcaaacccgacagcccagatttagcc
aagcattacaagtctgcgtcccctcagcctacatttcaaattaaaccggagactccagtg
gccccaaagaaacaccatgtgatccaggagctccccttggacaacacgtttgtggtgggc
tgtgactcactctccaagtgctcatcgactagctccgacccgtacagtgtctcagagtgc
agctgtcaggggggattcaagactgcggggcaaatcaccacccgacagaacctgagccag
acaccggagatctcatttaactcaccgccccccatttgtcctcataaggaggcctgtcaa
cttggcaagataacctctgtgaatactcagcgccgcgtgacgttccatcttcctgacggt
tcccaggagagctgcagtgacagcgggctgggagacccggagcctagcagcacggccagc
accacccagcctcttcccctcagcttcccccatgaggagtactatgagcaaacatcacca
aacagccgtactgagggagatggcaactcagaccctgaatctaccattgaagtgaaccta
cagaaagctttggctgaggcctctgagacctgtacccaggagtgtctgatactaggccac
tccgacagctgctggatgcccccagccctggcccagttccagggtcctggtagcaacagc
cccacctccacccctatcaccaccgccataaccggtacaatgccctcttttggcttccag
caaagctgcgcccggggagccaaagctaacatggtcagcattggggtcatggatgggcgc
cataccctgggcaggtctgtgccaaaaaaagatgaactggacaaagggatcaaccggccg
cagttctacaacaccctggatagacactgcagtaagaaggaggaccccatcaaggtcatc
cccctggcgagcttctcctcccccgggcagcagacgcccactggtgggggcagcagctct
ttcttacatgagcaccagttgtaa
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