Etheostoma spectabile (orangethroat darter): 116696826
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Entry
116696826 CDS
T08457
Symbol
poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03410
Base excision repair
esp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116696826 (poll)
03450 Non-homologous end-joining
116696826 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esp03400
]
116696826 (poll)
Enzymes [BR:
esp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116696826 (poll)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116696826 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
116696826 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
BRCT_2
LIG3_BRCT
NTP_transf_2
PTCB-BRCT
Ribosomal_S21
Motif
Other DBs
NCBI-GeneID:
116696826
NCBI-ProteinID:
XP_032383915
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All DBs
Position
2:23007172..23013612
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AA seq
601 aa
AA seq
DB search
MLSYATRRQSNGSAGMAQNTLTSVLKGHWCPPSRNKMEPRHGIIKAFPKVKRAKVLPRKD
APPVKKKLEECDISGSIFTGVTVYILPAGIGTARCQIFQRQIQQNGGQTESSLCPSVTHV
VVDDNMNRDRALRLLKVHCMPSGVQLVKCIWLSLCISEKQMLEVDSYSLISPKRESETKH
DNIKEEESNVKPAAEAIAEPVSDQARQEETIDMTVTKEDVRGDEDGVSQSDLEALITGQH
PKEETPGPSLDPGSDSAAQQALSGKWVCAQSSQSKSNNFNKHITDKLEVLAKAYTHQGDR
WRALGYSKAVNALKSYHKPITSYQEACQIPGIGKRMADKIDEIMESGHLRKLDHLGEAVP
VLELFTNIWGAGAKTAQLWYQQGFRTLEDIRTKAHLSNTQKIGLKHYDDFLDRMPREEAA
AIEKVVRDAVQAIDPGLLAMACGSYRREKATCGDVDILITHPDGKSHKGVFSKVLQSLHD
SGFLTDDLVSHEENGEQKKYMGVCHLPGPGHRHRRLDIIVVPYNEFACALMYFTGSAHFN
RSMRALAKTKKMSLSEHSLNKDVVRQGNLKVYSGTSFATPTEKDVFSLLGVPYRQPHERD
W
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttaagttatgcgaccaggcgtcaatcaaacggcagtgctgggatggcccaaaataca
ctcacttcagtactcaaaggccactggtgccccccttcaagaaacaagatggagcctcgt
cacgggattataaaagccttccccaaagttaaaagagccaaagtgttaccgagaaaggat
gcacctccagtaaagaagaaacttgaagaatgtgatatctcaggaagcatttttactggt
gttacagtgtacatcttgcctgctggaataggaactgccagatgccaaatctttcaaaga
caaattcagcagaatggaggacagacggagagttcactgtgtcccagtgtcactcatgtt
gttgtggatgacaacatgaacagggacagggctctgcgcttactgaaagtgcattgtatg
ccctctggagtccaactggtgaaatgcatttggttgagcttgtgcatcagtgagaaacaa
atgctggaagttgacagctacagccttatttcacccaagagggaatctgaaaccaaacat
gacaatattaaagaagaggaatcgaatgtaaagcctgctgcagaagctattgcagaacca
gtgtctgatcaggccaggcaagaggagaccatagacatgacagtcactaaggaggacgtg
cgaggagacgaagacggcgtctcacagagtgacctggaagctctcatcactggccagcac
cctaaagaggagactcctggccccagcctagaccctggttcagactctgctgctcagcag
gcgctctcagggaagtgggtctgtgcccagtcctctcagtccaaaagtaataacttcaac
aaacacatcacagacaaactagaagtgctggccaaggcctacacacaccagggagaccgg
tggagggcgctgggctactccaaggctgtcaacgcactgaagagttaccacaagcctatt
acatcatatcaggaagcttgtcagatcccaggaattggaaaacgcatggctgacaaaatt
gatgagatcatggagagcggtcacttgcggaaactggaccacctcggggaggctgtgcca
gtgttggagctttttactaacatctggggtgcaggagctaaaactgcccagctgtggtac
caacagggatttcgcacattggaggacatccgcacaaaagcccacctaagcaacactcag
aaaataggactcaagcactacgatgactttctagaccgaatgcccagagaagaagcagca
gccatagaaaaagtggtgagagatgctgtccaggccatagacccaggcctcttggcaatg
gcatgtggctcctaccgtcgggaaaaggccacatgtggagatgtggacatacttataact
catcctgatggcaagtcccacaagggggttttcagcaaagttttacagagtcttcatgac
agtgggtttttgacagacgacctggtgagtcatgaggagaacggagagcagaagaaatac
atgggtgtgtgccatttgccaggacccggccaccgccaccgcaggcttgacattatagta
gtgccctacaatgaatttgcctgtgctctcatgtatttcaccgggtcggcacactttaac
cgctcaatgagagccctggcaaagacaaaaaaaatgagcttatcagagcactcgctaaac
aaagatgtggtgcgtcagggtaacttgaaggtgtatagtggcacgtcatttgctacacca
acagagaaggatgtttttagtcttttaggcgtaccttacagacaacctcatgaaagagac
tggtga
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