Etheostoma spectabile (orangethroat darter): 116696913
Help
Entry
116696913 CDS
T08457
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116696913
Membrane trafficking [BR:
esp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116696913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
TPR_1
SH3_2
SH3_9
TPR_10
SH3_1
TPR_MalT
TPR_7
Motif
Other DBs
NCBI-GeneID:
116696913
NCBI-ProteinID:
XP_032384056
LinkDB
All DBs
Position
10:complement(202531..225096)
Genome browser
AA seq
1573 aa
AA seq
DB search
MALISGSCRLLGQMASCCCRPLLNSSCCGPFIKVCLSSFTDISPAELDALWREPPYALGG
VNEHFSGNDIMTEGVVEEEDGPMVESGEGGVEPDSYWMKKEAFLRGSTVTLGEKFSSEIV
LLFTGQRRSSMNPDQALQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVLTF
KTVEEIWKFSTYLALGYVARCLENFLCDQSFWLDPELLSDLQINVTVDEEHLATLYLGLL
LQEGSFFAKAQFTRSEQDEDDEEQLSFKKNDLLMVRDTGQDDMWEGTMLSTGNHGLVPVN
AMQPLPYPFYQWFLRKYPGNVGCSPAEKEPFEHAIVTGSCVAVVNYSPVGPDELLLSRGD
IVEIQGLLVRGLDMFIGKHTSTGHNGFVHKAHVKPLDVVPLGGQLVFLTEEERASLAQVN
PCSSEPSDSGLLERLFSSDISSVYRLDRLDETDFKYIRNRPKHDQKIPESTRQSVVSEKG
GGTPPYYSSPRASLCPSSPRLSLYQSHYPLPREGESLSFTLDDTFRELDQFQEDPPLFLE
QNSWEGEDSEFSNPTLTLLNHDHFQEDFLPLYDLQYSFLWVNFSGKTEDELSGHLESVRD
CAKRMGLHWAHRRACFLLGRLCARKLKFSQARVYYEEALSVRVDSFSDTPLLIALFTNLT
AVYLKQRMTDRLSQTLEKAGALLLCLPCHTFTSMDEVELLQLLLRRSVVMGDKHLEARVC
YLISSLFLLLRKTEDALPFVERLQFLSRTLSAAEGLPIVPLDLNWLLSWLYHRKYMPYLA
LSSLSLDSRQDHSLHDAFLRIELFIRNSVRLNPCWKEGTSLLPAQIVIYLQQALTIAKQG
EDMKTQRDLCQGLATIYQQYDALDEAVHCAQQAVETGGHIIEEEGFEASVLLGWLLVLTG
QAERAQSVLLPLLTSLQGTDSPTQRGVIHNLLALSLRRQGHIPEAGWHLHSALVISRESG
HQRNQALVLANLGCLALDVGASLVAERFLIRSLHLFLDLWESPTDEEHVQAYLWLGRSYK
DRRKSQDSRACYEMGLLIALHARNLHSQMVVAKVLSRLYAELMLYGQSIVYYELCVSVSR
ELKDKRLEGEFLEILSSVYLSLNTERSSRKSLDYTKQSLRISIDLGKREEESETWLQVGR
IYYLIQEDELADMYLQAAVKTALRMNDHHFAMSIYEEAGDVYFKGLRNRMASLPFYRDGS
LPFARSIKDIHSEFRLLSKLTELLMKQGEQDEALQYATLAVEIASKTAVQLNERTAYHRL
ATVYYHLQQYEMAENYYLKSLSLCPPVLGDPMEARYYTKVYCRLGNITLHKLKDSFDAVG
YFQLALAAAMEDQANPEALYVVYMKLAEIHGNHMPDAQLCQVYRDRAQNLKQLLAGEEGA
AVREESMKDEETEPVQKKDEDSNANNRPTESLVNRKTPTTENKKCEDNSIPRTCLIHGHT
ENICADTNIGDMNGKEDPNINLQINTDGPFMNAFGSETETIASQSHSDSILTESFDTAKE
DISDSSSSTDTLEIYQNQTDEKGFDTVHSMPSPIPDNYTSDITRHTDALNADSDTQDEQN
TSAKETDVHEDPL
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgccggctcctgggccagatggcgtcttgttgctgcaga
ccgctgctcaactcctcctgctgtggacccttcatcaaagtctgcctctcctccttcaca
gacatctctccagctgagctggatgctctttggagggaaccaccatatgctctcggggga
gtaaatgaacacttctcaggaaatgacatcatgactgaaggtgttgttgaggaggaggac
ggtcccatggtggagtcaggtgaaggtggggtggagcctgacagctactggatgaaaaaa
gaggcctttctcagaggaagtactgtcacactgggagagaaattctcctcagaaattgtg
ctgctgttcaccgggcagaggcgctccagcatgaatcctgaccaagccctacaggaggcc
ctgcgcacccgactgcgggtggtggagagcaacagccaggacgtcatccagctctttaaa
gacttgtctgcacgtctggtgtctgtccacgctgagaaggatagctttgtactcacattc
aagactgtggaggaaatctggaagttttcaacttacctagcattaggttatgttgctcgc
tgcttggagaacttcctgtgtgatcagtccttctggctggacccagagctgctcagcgac
ctgcagatcaatgtaactgtggacgaggaacatttggccaccctttacctaggactgtta
ctccaggagggatctttttttgccaaggcgcaattcacaagaagtgagcaggatgaggac
gacgaagaacagctgtcattcaaaaagaatgacttactgatggtgagagacacagggcag
gatgacatgtgggagggcaccatgctctccacaggaaaccatggcctggtgccagtcaac
gccatgcaaccgctgccttaccccttctatcagtggttcctgaggaagtacccaggcaat
gttggatgttcgccagcagaaaaggaaccctttgaacatgctattgtgacgggttcctgt
gtagcagtggtcaactacagtccagtgggccccgatgagcttctgctgagtagaggggac
attgtggagatccagggtctactagtccgaggccttgacatgttcataggaaaacacact
tccacagggcacaatggttttgtacacaaggcccatgtcaaacctctggatgttgtaccc
ctaggtggacagttggtctttctgactgaggaggagagagccagcctggctcaggttaac
ccctgtagctctgagccaagtgacagtggcctgctggaaagactcttctcgtctgacatc
agctccgtgtacagactagacagactggatgagactgacttcaagtacattagaaatcgt
ccaaaacatgatcaaaagattcctgaaagcacccgtcagagcgtcgtgtcagagaaaggt
ggagggacacccccatactactcctctcctcgagcctctctgtgtccctcctcccctcgt
ctgtccctctatcagtcccattatcctctgccacgcgagggagagagcctttccttcact
ctggatgacacgttcagagaactggaccagttccaggaagacccacctctcttcttggag
cagaacagctgggagggggaggactccgagttcagtaaccccacactgaccctgctcaac
catgaccacttccaggaggacttcctgcccctgtacgacctgcagtattccttcctgtgg
gtgaactttagtggtaagacagaggacgagctttcagggcatctagagagtgtcagggat
tgtgccaagaggatgggcttgcactgggcacatcgacgggcatgcttcctcctgggaaga
ctctgtgccaggaagctaaagttctcccaggcccgtgtgtattatgaggaggctctcagt
gtccgtgtggacagtttctcggacacgccgctcctcatcgctctcttcacaaacctcacc
gctgtctacctgaagcagcgtatgacagacaggctgtcccagactctggagaaggccggt
gccctgctcctctgtctgccctgccacacctttacctccatggacgaggttgaactgctg
cagctgctcctgaggagatcggtggtgatgggggacaaacacctggaggctcgcgtctgc
tacctcatctccagcctcttcctgctcctcaggaagactgaagatgctcttccctttgtg
gagcgactgcagtttctctcaaggacgctctctgctgcagagggacttcccatagttcct
ttggacctcaactggcttttgagctggctctatcatcgtaagtacatgccttacttagcc
ctgtcctctctgagtctagactcaagacaagaccactccctccacgatgctttcctgagg
attgagttgtttatcaggaactctgttcgcctgaacccgtgctggaaggaaggaacctcc
ctgctgcctgcccagattgtgatttatcttcagcaggccctgacaatagctaagcaaggg
gaggacatgaaaacccagagggacctgtgtcagggcttggccaccatctaccagcagtat
gatgctctggatgaggcggtgcactgtgctcaacaagctgtggagacaggaggccacatc
attgaggaggagggctttgaggcctctgtgctgctcgggtggctgctggtgttgacaggc
caggctgagagggcccagagtgtcctactaccactgctcacatctctccagggcacagac
agtcccacacagcgaggagtgatccacaaccttttggctttgagtctgaggcggcagggc
cacatcccagaggcaggctggcatctccactctgccttggtcatctccagggaaagtgga
caccagaggaaccaggccctggtattggccaacctgggctgcctggcactcgatgtgggg
gcatctttggtggcagaacgcttcctaatcagatccctgcatctttttctggatctctgg
gaaagccccacagatgaggagcacgttcaggcctacctttggctagggcggagctacaaa
gacaggaggaagagtcaggacagcagggcgtgctatgaaatggggctacttattgcacta
catgccagaaatctacacagtcagatggtggtggccaaggtgctgagtcggctctatgcc
gagttgatgctgtacggccagagtatcgtctactacgagctctgtgtgtccgtatccaga
gagctgaaggacaagcgactagagggagagtttctggaaatcctcagcagcgtctacctc
tcactcaacactgaaagatcatctcggaaatctctggactacaccaagcagagtctgaga
atttcaatagatttgggcaagagagaggaagagtcagagacgtggctgcaggtgggacgc
atctattacctcatccaggaggacgagctagctgacatgtacctacaggcagcagtgaag
acagccctgaggatgaatgatcatcactttgccatgagcatctacgaggaggcaggcgac
gtctactttaaaggcctccggaaccgcatggcttcactgcctttctacagggacggcagt
ctgccatttgcacggagcatcaaggatatccattcagagttccgtttgttgagtaaactg
acggagctgttaatgaagcagggagagcaggacgaggctctgcagtacgcaaccctggct
gtggagatcgccagcaaaacagctgtgcagttgaatgagaggacagcctaccaccggctg
gctacagtctactaccacctgcagcagtacgagatggcagaaaactactacctgaagtcc
ctgtccctctgtccgcccgtcctgggggaccccatggaggctcgctactacaccaaggtg
tactgcagactgggaaatatcactctacacaaactgaaggattcttttgatgcagtgggc
tacttccagttagctctggcagcggccatggaggaccaagctaaccccgaggctctgtat
gtggtgtacatgaagctggctgagatccacggcaaccacatgcccgatgctcagctgtgc
caagtttacagagacagagctcagaatctgaagcaacttctggctggagaggaaggtgct
gctgttagagaggaaagcatgaaggatgaagaaacagagcctgtccaaaagaaggacgag
gactctaatgctaataataggcctacagaaagtttggttaacagaaagacgcctacaact
gaaaataaaaagtgcgaagacaactcaattccaagaacttgtttaatacatggacataca
gagaatatatgtgccgacactaacattggagatatgaacgggaaagaagatcccaacatt
aatctacagattaatacagatggcccttttatgaacgcctttgggtccgagacggaaacc
attgccagtcagtcgcacagtgacagtattcttacggagtcctttgatacagccaaggag
gacatctcagactccagcagctccactgacactttagaaatataccagaatcaaacagat
gagaaaggctttgatactgtccacagcatgcccagtccaatacctgataattacaccagt
gacatcacaagacacacagatgccttaaacgcagattctgatactcaggatgaacaaaac
acatccgctaaagaaacagatgtgcatgaagatcctctttaa
DBGET
integrated database retrieval system
