Etheostoma spectabile (orangethroat darter): 116696915
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Entry
116696915 CDS
T08457
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116696915 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116696915 (atrx)
03036 Chromosome and associated proteins [BR:
esp03036
]
116696915 (atrx)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116696915 (atrx)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116696915 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116696915
NCBI-ProteinID:
XP_032384062
LinkDB
All DBs
Position
10:19778627..19816766
Genome browser
AA seq
2042 aa
AA seq
DB search
MSLASSESHLDQMSEKAEEPGSSTETMKPSSSRNKRKPTTVAKHTELNESDDSVESENEG
ATSDNPSDNNTCSVSKGTLVMRPSGNENKGAMKLRVDFKQKHTDDTLQKKVSCTACGKQV
NQFQRNSVYEHPALKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNA
FCKKCILRNLGRKELSVITDENSKWHCYVCRSEPLQDLVSKCHRVMEKQELKQPKPEKNE
ERESRRHKNKTVREHKAVVNGKEHTEGSGTMTFAYKKLQVPKELIKKAKKLVETTTGLNN
TFIQFIQQAAEKQEDKSIRYRHLKAFKAVLADLKKAHSALEEALGPEFKNMELQNGNEGQ
HIVRKSIHIVAPEENDHMDNVADADAEVDIDAEQDADITEEADVEEEADVEEEEADVEEE
ADAADELDKEQLNEQKVNNDQVSVATEMKDNQTKTDSTKKTIKTEECDDGLASAGEMSLD
QDIMSVPPSVPEELFQMVESLAGSTMLSQTETDLVTGADTKSNGNSTASQPTRPKVKNLI
VKLTPVPVVTTRGSRSSRSKNKEKDGEMQKNCEEKCEKGKDDASDAADGTDSPPPSRRSS
RLKTTPLRKQAEKKGKEESSESEEDKIKAKSSKKSSYANKEDGEKAKDSEKKTVDSDSDE
VPNILLEKAAAGHTTDEEQGTTSAKKCLFKLNNTSTKDTDKVSKRKRKSESSDSDLDNKS
KKTSKKKKKKQNGSDSSDSDQEKETKSKAATAKRRSSRVKKQDESKEEDKNSPERKATRG
RRSYENKRKGRSPKAASKLQSSSSEDEEEQLAEGDSGEDSDEQKIKPIVDDNVVGGSGPF
HQSSGDEEGDKEKVSQVCEDDDDDDPENRIAKKMLLAQIKSNYSSGAESSSDNEGAEKDA
KSSKKVKKEEDDEEEEEEEQDNDSEDSSSDVEVKKRGRRHKLLRHKLSLSEGESGEEQAA
SKEKKNKKKVGSDDSSDSDSDFEKSESSEESGISEELSESENEGKRRKTRSSKKKDHEKP
RSYKQQKKKRRRIKVQDSSSSNEKSGEDEDDPDGEERKQRKKIRKILKDDKLRTETRDAL
KEEEERRKRIAEREALRQKLRETIVVEESSQMNCPITTKLVLDEDEETKEPLVQVHRNLV
TKLKPHQVDGVQFMWDCCCESVKKIEKSPGSGCILAHCMGLGKTLQVVTLLHTLLLCEKL
NFSTALVVCPLNTVLNWLNEFEKWQVGMKDDESLEVSELATVKRPQDRAYALQRWQDTGG
VIIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDLVICDEGHILKNEASAVSKAMNS
IRTRRRVVLTGTPLQNNLVEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLQDV
RIMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLSIRVTPIQCKLYRYYLEHFTGV
GNALEGSRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENRGFFDEDSMDEFIASETEE
SSMSMTSDDERTKKKKKQGKGKKKRSDDSDSDDVEVIKEWNTSSRGRNGEGRVRPEPVEE
ARPTSSAPGSPNPDWHRDFVTDADAEILEHSGKMMLLFEILRMAEEVDEKVLVFSQSLIS
LDLIEDFLELSCRAKDENKVSPYKGEGKWFRNIDYYRLDGSTNATTRKKWAEEFNDISNP
RGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDVQSIFRVYRFGQLRTVYVYRFLAQ
GTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTTNELAELYTFDPDLLDGPSEKKSKKATP
LLPKDPFLAELLQNSKDQIVCYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGVSMRT
NFQSAYPQMDMGSSNYFSFNMAALASMTNQQLEDLINQGRHKVIEATNALKTLTRESLED
TIARLWKENPALTENQVQAMALGRQATVELEVKRREIAYRDVLTRQQTLMMYVQKLITNR
KVQEQQMAMANQASYLNQLAMQNGMMGGAGLSQMDLLGLYQQLHGLNSHQGTGKNPGPSK
GL
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcttcttctgaatcacacctagaccaaatgtcagaaaaagcagaggagcct
ggtagctcaacagaaactatgaagccctcctcttctcgcaacaaaaggaagcccaccact
gtagctaagcacactgaactgaatgaatcggatgactcagtcgagagtgaaaatgaaggt
gcgacttctgacaacccttcagacaataacacatgcagtgtatctaaaggcactttagtg
atgaggccatctgggaatgaaaataaaggtgccatgaagctcagagtggattttaaacag
aaacatacagatgataccctgcagaagaaagtaagctgcactgcctgtggaaaacaagta
aaccagtttcagcggaactctgtgtacgaacatcctgcgctcaaagtacttatctgcaag
tcatgctacaagtattacacaagtgatgacatcaacagagactctgatgggatggatgag
cagtgcaggtggtgtgctgaaggaggcaagctcatctgctgcgactactgcaacaacgcc
ttctgcaagaagtgcatcctgcgcaacctgggcagaaaggagctgtcagtcattactgat
gaaaactcaaagtggcactgctatgtctgcaggtcagagcccctccaggatctggtctcc
aaatgccaccgcgtcatggaaaaacaagaactcaagcaaccaaaaccggaaaaaaatgag
gaacgtgaaagcaggagacacaagaacaaaacggtcagagagcacaaagcagttgttaat
gggaaagaacataccgaaggctcagggaccatgacattcgcttacaaaaaactgcaggta
cccaaggaacttataaagaaagcaaaaaagcttgttgaaacaacaactggtctgaacaat
acattcatccagttcatccagcaggcagccgagaagcaggaagataaatctatcaggtac
cggcatttaaaagccttcaaggctgtgcttgctgatttgaaaaaagcccacagtgctttg
gaggaggctttgggacctgaatttaaaaacatggagttgcagaatggtaatgaagggcaa
catattgtgagaaagagcatacacattgtagcccctgaggaaaacgaccacatggataat
gtggcggatgccgacgcagaagtggatattgatgcagaacaggatgctgatataacagag
gaggctgacgtagaggaggaggctgatgtagaggaagaggaggctgacgtagaggaggag
gctgacgcagcagacgagttggacaaggagcagcttaatgagcagaaggtgaacaatgat
caagtgtcagttgcgactgaaatgaaagacaaccaaacaaaaactgattcaaccaaaaag
acaatcaaaacggaagaatgtgatgatgggcttgcgtcagctggtgaaatgtccctagat
caagacatcatgtctgtgcctccttcggttccggaagaactttttcagatggtggaaagt
cttgctggttccaccatgctttcacagactgagaccgatttggttacaggtgctgataca
aagtcaaatggaaactcaacagcctctcaacccacccggcccaaggtgaagaacctcata
gtcaaactgactcctgtaccagttgtgacgacgcgtgggtccaggtcctccagatccaaa
aacaaagaaaaagatggagagatgcaaaaaaattgtgaagaaaaatgtgagaaggggaaa
gacgatgcttctgatgcagcagatgggacagacagcccaccaccaagccgtcgttctagt
agactgaagaccactcccttgagaaagcaggctgagaaaaagggcaaggaagaatcctca
gagtccgaggaagataagatcaaggccaaatcttccaagaagtccagttatgccaataaa
gaggatggggagaaggccaaggattcagagaaaaagactgtagattctgactcagacgaa
gttcctaacatactgctggagaaagctgcagcaggccacactacagatgaggaacagggg
accacaagtgctaaaaagtgtttattcaaactaaacaacacatccacaaaagatacagac
aaagtgtccaaacgcaaaaggaaatctgaaagctctgattcagacttggacaacaaaagt
aaaaagacgtccaagaagaagaagaagaaacagaatggctctgactcctctgactctgac
caggagaaggagacaaagagtaaagcggccacagcgaagaggagatctagccgtgtgaag
aaacaagatgaatcaaaagaggaagacaaaaactcacctgaaagaaaagcaaccaggggg
agaaggtcttatgaaaataagcgcaagggaaggagccccaaagctgcctccaagctgcag
tcatcctccagtgaggatgaggaggagcagctggctgaaggtgactctggagaggacagc
gacgaacaaaagatcaaacccattgtggatgataatgtggtcggtggaagtggacctttc
catcaatcctcaggagatgaagagggcgataaagaaaaagtctctcaggtttgtgaagat
gatgacgatgatgatcctgaaaacaggattgcaaagaaaatgcttctcgcccaaataaaa
tccaactactcttctggagcagagagctcctctgacaatgaaggagcagaaaaggatgca
aagtcctccaagaaagttaaaaaagaggaggatgatgaagaagaagaagaagaagaacaa
gacaatgattcagaagactctagctctgatgttgaagtgaagaaacgtggcagacgccac
aaattgcttcgtcataaactctcgctgagtgagggtgaatcaggagaggagcaagctgcc
agtaaagaaaagaagaacaagaagaaagtgggcagcgatgactcttcagactccgactct
gactttgagaagtccgagtccagtgaagagtcggggataagcgaggagcttagtgaatca
gagaacgagggaaagcgcagaaagaccagatcgtcaaagaagaaggaccatgagaaaccg
agaagttacaagcagcagaagaagaagcggcgcaggatcaaagttcaggattcctcttcc
agcaatgagaagagtggagaggatgaagatgacccagatggagaagaacgcaaacaacgc
aaaaagatccgcaaaattctgaaggacgacaagctgcggacagagacgagagatgctcta
aaagaagaagaggagagaaggaaacgtatagcagagagagaggcactcaggcagaaactt
cgtgagacgattgtagtggaggagtcttcccagatgaactgtcccatcaccaccaagctg
gtgctagatgaggatgaagagaccaaggagccgttggtgcaggtgcacaggaaccttgtc
acaaagcttaaacctcaccaggttgacggggtgcagttcatgtgggactgttgctgtgaa
tctgtgaagaagatcgagaagtctcctggctccggctgcatcctcgcccactgtatgggt
ctgggtaaaactctgcaggtggtgacattacttcacactttgctactttgtgagaagctc
aatttctccacagcactggtggtatgtccactgaacacggtccttaattggctcaacgag
tttgagaagtggcaagtaggaatgaaggatgacgagagtttagaggtatccgagctggct
acagttaagaggccacaggatagggcatacgccctccagcgatggcaggatacgggtgga
gtaatcatcatcggttacgaaatgtaccgcaacctgacgcagggcaggaacatcaagagc
aagaagctcaaagagacctttcaaaagacactggtagatccaggtccagacttggtgata
tgtgatgaaggacacatcctaaagaatgaggcatctgctgtgtccaaagcgatgaattct
atcaggacgaggaggagggttgtgctgacaggaacacctctacaaaacaaccttgttgaa
taccactgcatggtaaactttatcaaggagaacctgctggggtcagttaaggagttcagg
aaccgcttcattaaccccattcagaatggtcagtgtgccgactccacactacaagatgtc
cggattatgaagaaaagggctcacatcctctatgagatgctggctggctgtgtccagagg
aaagattacacggcactcaccaagttcctgcctcctaaacatgagtatgtgttgtcgatc
agagtgacccctatccagtgtaaactatatagatactacctggagcacttcacaggtgtg
gggaatgctttggaggggagccgcggccgcgcagggaccaaactcttccaggatttccag
atgctcagcagaatctggacccatccctggtgccttcagctggactacatcagtaaagaa
aacaggggtttctttgacgaggacagcatggatgagttcatcgcttcagaaacagaagaa
tcctccatgagtatgacctctgatgatgagaggacaaaaaagaaaaagaagcaagggaag
gggaaaaaaaaacgatctgatgactcggacagtgatgacgtggaggtcatcaaggagtgg
aacaccagctctcggggcagaaatggagagggtcgagtaagaccagagcctgtcgaagaa
gctcggcccactagttcagcaccagggagtcccaaccctgattggcacagggactttgtc
acagatgctgatgctgagatcctggagcactctggaaagatgatgctcctctttgagatc
ctgcgcatggcagaagaagtagatgaaaaagtgttggtgttcagtcagtctcttatctct
ctggacctgattgaggatttcctggaactgtcttgcagagctaaagatgaaaataaagtc
tctccatacaaaggtgaaggcaagtggttcaggaacattgactactatcgcctggatggc
tccaccaacgccaccaccaggaagaagtgggctgaagagtttaatgacatcagtaatcca
agaggtcgtttattcctcatttcaacgcgagctggctctcttggcatcaacctggtggca
gccaacagggtcatcatctttgatgcctcatggaacccctcctatgacgtccagagtatt
ttcagggtctaccgctttggtcagttgaggaccgtctatgtctacaggttcctggcccag
ggtacaatggaggagaagatttatgaccggcaggtaaccaaacagtctctgtcattccgt
gtggtggaccagcagcagattgagaggcactttacaacgaatgagctggccgagctttac
acatttgacccggacttgctggatgggccctcagagaagaagagcaagaaagccacgccc
ttgcttcctaaggatcccttcctggcggagttgctgcagaacagtaaggaccagattgtg
tgttaccacgagcacgactccttgttggaccacaaggaggaggaagccctcagcgaggag
gatcgcaaggctgcctgggccgagtatgaagcagaaaagaagggtgtgtcgatgaggacc
aacttccagtctgcatacccccagatggatatgggctcctccaactacttctcctttaac
atggctgctttggcctccatgaccaaccagcagctggaggaccttataaaccagggacga
cataaagtcattgaagcaacaaatgcgttgaagactctaacgcgcgagtcactggaagat
actatcgccagattgtggaaggagaacccagcactcacagagaatcaggtccaggccatg
gctctgggacggcaggccactgtggagctggaggtgaagcggagggaaattgcgtaccgg
gacgttctcaccaggcagcagacgctgatgatgtacgtgcagaagctgattaccaacagg
aaggtgcaggagcagcagatggctatggctaaccaggccagctacctgaaccagctggcc
atgcagaacggcatgatgggaggtgcagggctcagccagatggacctgctggggctttac
cagcagctccacggcctaaactcccatcaaggcacgggcaagaatcctgggccctccaag
ggcctgtag
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