Etheostoma spectabile (orangethroat darter): 116697008
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Entry
116697008 CDS
T08457
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esp02000
]
116697008 (tmc5)
03037 Cilium and associated proteins [BR:
esp03037
]
116697008 (tmc5)
Transporters [BR:
esp02000
]
Other transporters
Pores ion channels [TC:
1
]
116697008 (tmc5)
Cilium and associated proteins [BR:
esp03037
]
Other cilia and associated proteins
Stereociliary proteins
116697008 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
116697008
NCBI-ProteinID:
XP_032384197
LinkDB
All DBs
Position
2:complement(23492432..23506404)
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AA seq
977 aa
AA seq
DB search
MTSYSNGAFFNPAYHDSETLEIDRSSSKTHHANPYAGGDRAVAHYSTGPASSDHAAGRVP
WGGWQEESWRGRESIPMGLISTRPGSPSWQHDLNHSRPTFQIPPGSQYDLSTSVRLPSAP
SGNTTVRWRGMTMRRMSMFPNGDPTHVAFTEDAIRNEMENEEQNLVKELVALSTQDRIRA
IRDLPMSVDEKKHIRSQVLAFKSSKQSRQFTCFADCSENVSLSFRRCGYSLRSARQTLEL
WQGIMKEIGGTFGTSVLSYFVFLKWLLMFNIFSFLVNFGFITIPLLVSDPSPNIPPNVSF
RGLEILTGAGYFQYTVMYYGGYSNETLVDPVEYNMQLAYFFTIAIYMVLCGLALIFSMAS
SFKKNYVLADPSSNKAWQLLSSWDFSITNERAVRQRKNNLRVQLKESLSEKAQRELLTLS
EKLKHFGVYLGFWLLSTGLAVGCGATIYYLCQYEQQQATDISNRSLLQEAETLLVPFVVS
LMNLVVPLFYSLFNKFEHYSSQRRQIYALVVRNVLLKMSILAVLCYYWMNVVAKKFLCWE
SMVGQALYRLVIFDFLFLMLGSFFGEFLSNVIGTRLLPRLGVPEFDVARNVLELIYAQTL
AWIGIYFSPLLPAIQIFKLFILFYIKKVSLTKNCQPPRRSGRAAQMQTIFIALLFFPCFV
GALSMVAYTTWRLTPSGECGPFRGLNNTFNVVGVWIHDLETIPGSQWVVWIYENVIRSEI
FFFFVSLIIMVIIYIFWQVIQGREQLIGLLRQQVVNEGKDKSFLLDKLQNLQKSQPDKKS
KQNTQKKHTKQRLDELSLGGQSNSSAMVQALLVHQLLEEEERRDTGGVPVPADISTSSAL
IQAMLARQRAYDQDGDEHLSSSSALSQAMQARQRAEGQEMDEYYTTGFSENPINTSSAVA
QAMQARQRAEEDGADDLPSSVSSVMMQVMQARQIAEEEDRPEWVPAPTQNPSPAGSSALI
QAMLARQQAQNEYDDGY
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttatagcaacggggcattcttcaaccctgcctaccatgacagcgagactctg
gaaattgataggtcttccagcaaaacccaccacgctaacccttatgccgggggtgacagg
gcagttgcacattactcgactggtccggccagcagtgatcatgctgcaggcagagtacct
tgggggggctggcaggaggagagctggagggggagggaaagcatccccatgggcctcatc
tcaacgcgccccgggagtccttcatggcagcatgacctcaatcacagtaggcctaccttc
caaatcccacctggctctcaatatgatctatccacttctgtccgccttccttctgcacca
tcaggtaacacgacagtgagatggaggggaatgacaatgagaaggatgagcatgtttcct
aacggggatcctacccatgtagccttcacagaggacgccatcaggaacgagatggagaat
gaggaacaaaacttggtcaaggagctcgttgccctgtcaacacaagaccgaattcgggcc
attcgggaccttccgatgagcgttgacgaaaagaaacatatcaggagccaagtgctggca
tttaagtcttccaagcaatctcgccagttcacgtgttttgcagattgctctgagaatgtg
tcactgtctttccgcaggtgcggctacagtttaaggtcagccaggcagaccctggagctg
tggcaaggcatcatgaaggagattggtggcacttttggcaccagtgtcctctcttatttt
gtgttcctcaagtggctacttatgttcaacattttctccttcctggtcaactttggcttc
atcaccatcccgctgcttgtttctgacccctcacccaacatacctcccaatgtgagcttc
agaggactggagatactgactggagctggatatttccaatacactgtcatgtactacggt
ggctacagcaatgaaaccctggtggatccggtagagtacaacatgcagctggcctatttc
ttcaccattgcaatctacatggttttgtgtggccttgcacttatctttagcatggccagc
tcattcaagaagaactatgtactagcagacccatcttcaaacaaagcatggcagcttctg
agcagctgggattttagtattaccaatgagagagcagtgagacagcgcaagaataatcta
cgcgtccaactcaaggagtctttgtcagagaaggcccagagggagctgctaaccctctct
gaaaagctgaaacactttggggtttatctgggtttctggctcctctccaccggcttggct
gttggttgtggagctactatctattatctctgccaatacgaacagcagcaggcaacagat
atttccaaccggtctctgctgcaggaggccgaaactcttctggttccctttgtggtgtct
ctgatgaatctggttgtcccactcttctactcccttttcaacaagtttgagcactactcc
agccagcgcagacagatctacgctctggtagtcagaaatgttttactcaagatgtccatt
ctggctgtcttgtgttattactggatgaatgtggtggcaaagaagtttttgtgttgggag
tccatggtgggacaggctttgtaccgtctggtcatttttgatttccttttcctgatgctg
ggatcattctttggagagtttcttagcaatgtgattggaacacgactactaccacgtctg
ggggttccagagtttgacgtagccagaaatgtcctcgaactcatctacgcacagactctg
gcttggattggaatatacttctctcctctgctgccagccatccagatcttcaaattgttc
atcttgttttatataaagaaggtcagcctgaccaaaaactgccagcctccgcggcgatca
ggcagagcagctcagatgcagaccatcttcatcgccctcctcttcttcccctgctttgtg
ggagccctgtccatggttgcatacaccacctggagactgactccttcaggagagtgtggc
ccttttcggggactcaacaacaccttcaatgtggttggagtctggatacatgatcttgag
acgatccctggttctcagtgggtcgtatggatctacgaaaatgtcatcagaagtgaaatc
ttcttcttttttgtctcactcatcattatggtcattatatatatcttctggcaagtcatt
cagggccgtgagcagcttattggtctactgagacaacaggttgtaaatgaaggaaaagac
aagtccttcttgttagacaagctccagaacctccagaaatctcagcctgacaaaaaatcc
aaacagaacactcaaaaaaagcacaccaaacagcgtttagatgaactctccttgggcggt
cagtccaactcaagcgccatggttcaggcattacttgtccaccagctgcttgaagaggag
gagagacgcgacactggcggagtgcccgttcctgccgacatctccacctccagcgctctg
attcaggccatgttggcacgtcaaagagcttacgaccaggatggagacgaacacctgtca
tcctccagcgccctctcacaggccatgcaagccaggcagagggcagagggtcaagagatg
gatgaatactacaccacaggtttttctgaaaatcctatcaacacatccagcgctgtcgca
caggcgatgcaagccagacaaagagcagaggaggacggagcagacgacctgccatcttct
gtgtcgagtgttatgatgcaagtcatgcaggccaggcagatagcagaggaagaggacagg
cctgagtgggtcccagctcccacacaaaacccatctcccgctggctcaagcgctctcata
caggccatgttggcccggcagcaagcccagaatgagtacgatgacggctactga
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