Etheostoma spectabile (orangethroat darter): 116697013
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Entry
116697013 CDS
T08457
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116697013 (rlim)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116697013 (rlim)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116697013 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
116697013
NCBI-ProteinID:
XP_032384202
LinkDB
All DBs
Position
10:19978228..19984267
Genome browser
AA seq
701 aa
AA seq
DB search
MEGSDSLEQNGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNSTSAPSTESGEDPVEPPENTEDPANGDSLLDWLNTVRRTG
NTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPQESPEGQE
VVASAEPQVAIAEPEVAIAEPEVAIAEPEVAIAEPEVAIAEPEVENAEPEVDNAEPQVPM
ETEVVEEPVIEELAVTVEQEPEPELEEVVSQEILGEPPSSPAALPVQPPLSLSPRRGQRR
ARSRSPEPRRTRARTARSRSPLNLDQLDGLPNPRHAHSSQSLNSATIAPPVSQVEGSSRT
RQHVLSRQSTADSDVQPSRASAETVPEVQNMGSQEGEAAGGEGGAAGRRPPTIMLDLQVR
RVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPI
RRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGANTPADLAEALNNP
DATTPPAAASAPVADVDEPPLAAGVRARTAEADIDEGLATAPPASGGRARPRPPISLEEP
STLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGETDALKTCSVCITEYAEGNKL
RKLPCSHEYHVHCIDRWLSENSTCPICRRAVLISANRESVV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtttagagcaaaatggcagtgaccagccagagtcacagcgcaga
aggcagctggaccgcctggacagggaagaggccttctaccagtttgttaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatcttttgggcaccccaggagaggtaaca
gaggatgagctgtttagtagactacagcaaatcaaggatggtccggaacagcagaataac
agtactagtgcccccagtactgaaagtggagaagatccagttgaaccaccagaaaacact
gaggatcctgccaatggggatagtctcttagactggttaaatacagtgaggcgcacaggc
aacacaactagaactggtcatcgtggaaaccagtcatggcgggctgtaagccagaccaac
ccaaacagtggcgattttcgctttagcctggaaatcagcgtgaatcgcaacctggctgaa
cagcaggctgctgctgaaggtgagcaggagtctccccaggagtctccagagggtcaagaa
gtggttgcaagtgctgaaccacaggtggctattgctgaaccagaggtggctattgctgaa
ccagaggtggctattgctgaaccagaggtggctattgctgaaccagaggtggctattgct
gaaccagaggtggaaaatgctgaaccagaggtggacaatgctgaaccacaggtgcccatg
gagacggaagttgtagaagaaccagttatagaggaattggctgtcacagtggagcaagaa
ccagagcctgaactagaagaagttgtttcacaagagattttaggagaacctcccagctca
cctgccgccctgccagtacaacccccactttctctttctccacgtagagggcaaagacga
gcccgcagccgcagtccagaaccacgcaggactagggcccgtacagccaggagccgctcc
cctctcaacctggatcagctggatggtctccctaatccacgtcatgcacacagctctcaa
agcctgaactctgccaccattgctcccccagtgtctcaagtagagggtagttctcggact
cgacaacatgttctttctaggcaaagcactgctgacagtgatgttcagccatctagggct
agtgcagaaacagtcccagaggtccaaaatatgggatctcaagaaggagaagctgctggg
ggtgaaggaggtgcagcggggcgccggccccctactattatgcttgatctccaggtgcgt
cgtgtgcgtcccggcgaatatcgccaaagagacagtattgctagccgcacccgctcgcga
tcccagaactcaaacaacacatttctttatgagagtgagcgtggtggatttcgtaggact
ttctcacgctctgaacgtgctggtgtgaggacctacgtcagcactatacgcatccctatt
cgaagaatctctgatgcaggtttgggagaggcaacctcaatggctcttcaatctatgatt
agacagattatgactggttttggtgaactcggctacctcatggattcagactctgattct
tcagattcaaaccggggtgccaacacacctgcggatctggctgaagccctcaacaaccca
gatgctactactcctcctgctgctgcttctgctcctgttgccgatgttgatgaaccacct
ctggctgcaggagttagagcaaggacagcagaggctgatattgacgagggccttgccact
gctccacctgcttcaggtggcagggctcgacctagaccacctataagcctagaggagccc
agcacgctgcccttccttcggcttgcccacttcttcctcctaaatgatgacgatgaggat
cagccccaagggctgactaaagagcagattgacaacctctcaatgcgcaactttggtgag
actgatgccttgaaaacttgcagtgtctgcataacagaatatgctgaaggtaacaagcta
cgtaagctgccctgctctcatgagtaccacgtgcactgcattgatcgctggctatccgaa
aactctacttgtcccatctgccgcagggctgtcttaatatcggccaaccgagagagcgtg
gtgtag
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