Etheostoma spectabile (orangethroat darter): 116697085
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Entry
116697085 CDS
T08457
Symbol
lamc2
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04382
Cornified envelope formation
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116697085 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116697085 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116697085 (lamc2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
YwqH-like
Fib_alpha
Tht1
LXG
Motif
Other DBs
NCBI-GeneID:
116697085
NCBI-ProteinID:
XP_032384289
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All DBs
Position
10:30615427..30627079
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AA seq
1129 aa
AA seq
DB search
MKSGWVSLCGLLAALCVARATYTHFTPVRCDCNGRSRYCLRDAVGLHCVDCQGNTEGRHC
ERCKAGFHLTGAPPSCTPCLCNPTGSVAATCDSRGRCSCKEGVTGEKCDRCPDGPMGPDG
CSQRRQTREDSGSQPCFCYGHSSQCSAQSDYSVHSITSTFTHGPDGWKSATDQGVTPDDV
HFRWSPSHQDLEVVSKNSLPVYLYAPAPFLGNHLLSSGQNLSFSLRLDRGVRHPSTSDVV
LEGGGLRASSSLGELRSVLPCGQKIRYSFRLDGGPGSRWRPQLSTSQFQTLLQNLTAIKI
RATFGQDGRGYLDNVQLVSARRGGDGPPADWVQTCSCPPGYEGAWCERCSAGFRRRVPAN
GAFSGCERCSCSGGSCDPQTGDCYSGDETPEDTGCPHGSYRDPWSPHGCVRCPCPEGQSC
SLTAGSLEPQCDRCPTGTTGPRCDVCQEGFYGNPTGSGGVQRPCRPCLCNGHIDVGVAGS
CDRRSGECLRCRNNTAGRSCEACRPGFYHGTAADACKPCSCDVLGSESRQCDDAGRCRCR
PGFEGLKCQRSNCPACFSPIKKKMDSYAAKLKELEILFSDMNGGLKPANSAEMEAALRAA
EEMVDDLQYDAELLTGSEKNLQTRLASISRSQLAEGLDIQNIADTADAIKRREKTYKAKV
AAVQSLMEEMRRELSDARDQLRLIEIPLGDAPLSSNLLSSLVQTATSLADKHETTADAVE
RSANDALGDSQKSLDLVRTLMNKENKVKELIGDLKTTYDQHSAQVKGLENQATRLSTEAG
DESKMADGMLKDIANMERSIPSSLKGQVDAMVSRLEDVKKSVDADISGIAALQDSVQRDK
AATEDLLARGKTAQKEFDKLSDRVDIAKLDTEDALRRINSNTNELDDALNNLRGFDQQID
GGKALADAAIRRLPGISSVIQQAVDSNAETVSVLGTVSRDYDAALGTINMLENLVNGLEG
AVGSCRLLPIAEGSHQLNRDTKDLRTAAADTAADLVSELDAGRKLEADAQQAAAGATGAF
NNAKQTRDAVGKTLRDISSLLANMNQSGGAVDEKQLKRLEDSVSGAQRDVEGRLRPRLRD
MEAQEAAHRRRLATIDQDITMILGDIANLEDILRTIPSGCFNTPPIEEA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcggctgggtttctctctgcggactcctcgcggcgctctgcgtcgcccgggcg
acctacacacacttcactccagttcgttgcgactgcaacgggagatctcggtactgcctc
cgtgacgccgtgggcctgcactgtgtcgactgccagggaaacaccgaaggccgccactgc
gagcgctgcaaggccggcttccacctgacgggggcgccacccagctgcacgccctgtctc
tgcaacccaacaggctctgtcgctgccacctgtgacagcagggggcgctgcagctgcaaa
gaaggcgtcaccggagagaaatgcgaccgctgccccgacggtccgatgggaccagacggc
tgctcacagaggcgccagaccagagaggattctgggagtcagccctgtttctgttacggt
cacagcagccagtgttcggcgcagtccgactactccgtccacagcatcacctccaccttc
acccacggtccggacggctggaagtcggcgaccgatcagggcgttacccccgacgacgtc
cacttccgctggtcaccgagccaccaggacctggaggtggtctccaaaaacagcctgccg
gtctacctgtacgctccagctccgttcctgggaaaccatctgctgagttcgggtcagaac
ctgtcgttctccctgcgtctggaccgcggcgtgcgtcacccgtccaccagcgacgtggtc
ctggaggggggcggtctccgggcgtcctcctcgctgggggagctgcgctccgtcctcccc
tgtggacagaagatccgctacagcttcagactggacgggggtcccgggagccggtggagg
cctcagctttccacctctcagttccagacacttctccagaatctcaccgccatcaagatc
cgggcaacgttcggccaagatgggcgtggttacctcgacaacgtgcagctggtgtctgcc
cggcgggggggtgacggccccccagcagactgggtccagacctgcagctgccccccgggg
tacgagggcgcctggtgcgagcggtgctcggcgggcttcaggcggcgggtgccggccaac
ggcgccttcagcggctgcgagcgctgcagctgcagcggaggaagctgcgacccgcagacc
ggggactgttactccggagacgagacgcccgaggacaccggctgtccccacgggtcctac
cgcgacccctggagcccgcacggctgcgtcaggtgtccctgtcccgaaggacagtcctgc
tccctgaccgccggctcgctggaaccccagtgtgaccgctgcccgaccggaaccaccggt
cctcgctgcgacgtgtgtcaggagggtttctatggcaacccaacaggaagcggcggcgtg
cagcggccctgccggccctgcctctgtaacggccacatcgacgtcggcgtggcgggaagc
tgcgaccggcgcagcggggagtgtctccggtgtcggaacaacacggcggggcgcagctgc
gaggcgtgcaggcccgggttctaccacgggaccgccgccgacgcctgcaaaccatgcagc
tgtgacgttctgggctctgagtccagacagtgtgacgatgcgggtcgctgccggtgcaga
ccgggcttcgagggtctgaagtgccagaggtccaactgtcccgcctgtttcagccccatc
aagaagaagatggattcgtacgctgccaaactgaaggagctggagattctgttctccgac
atgaacggaggtttgaaaccagccaacagcgctgagatggaggcggctctgagagcagcc
gaggagatggtggacgacctgcagtatgacgccgagctgctcacaggatcggagaagaac
ctgcagacccgcctggcatccatcagcaggagtcagctggccgaggggctggacatccag
aacatcgccgacacggcggacgccatcaaacgccgagagaagacgtacaaggcaaaggtg
gcggcggttcagagtctgatggaggagatgagacgggaactaagcgacgccagggatcag
ctcagattaatcgagattcctctcggagacgccccgctgagttccaacctgctgtcctct
ctggtgcagacagctaccagtctggctgataaacatgaaacgacggcagacgccgtggag
cgaagcgccaacgacgctctgggggactctcagaagagcctggacctggtccgaaccctc
atgaacaaagagaacaaagtcaaagagctgatcggagatctgaaaaccacgtacgaccag
cactccgcccaggtgaaggggctggagaaccaggccacccggctcagcaccgaggccggg
gacgagagcaagatggccgacggcatgctgaaagacatcgccaacatggagcgaagcatc
ccgtcctccctgaaggggcaggtggacgccatggtgtccaggttggaggacgtgaagaag
tcggtggacgcggacatctctggcatcgcggcgctgcaggacagcgtgcagcgagacaag
gcggccaccgaggacctgctggcccggggcaagaccgcccagaaggagtttgacaaactg
tccgacagagtggacatcgccaagctggacacggaggacgctctgagacgcatcaacagc
aacacgaacgagctggacgacgccctcaacaacctgagaggcttcgaccagcagatcgac
ggcggtaaagctctggccgacgccgccatccggcgtctcccgggcatcagcagcgtgatc
cagcaggccgtggacagcaacgccgagaccgtctccgtcctgggaaccgtgtccagagac
tacgacgccgcgctgggaaccatcaacatgctggagaacctggtcaatggtctggaggga
gccgttgggtcctgccgtctcctgccgatcgctgaaggaagccaccaactgaaccgggac
accaaggacctgagaacggcggcagcggacacggctgcagacctggtctcagagctggac
gctggcaggaagctggaggccgacgcccagcaggcggctgctggagcgaccggagctttc
aacaacgccaaacagacccgagacgctgtggggaaaacactgcgagacatcagcagtctg
ctggctaacatgaaccagagcggcggtgcggtggacgagaagcagctgaagcggctggag
gactcggtgtccggcgcccagagggacgtggagggccgtctgaggccccggctccgggac
atggaggcgcaggaggcggcccaccgccgccggctggccaccatagaccaggacatcacc
atgatcctgggagacatcgccaacctagaggacatcctgcgcaccatccccagcggctgc
ttcaacaccccccctatcgaggaggcctga
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