Etheostoma spectabile (orangethroat darter): 116697089
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Entry
116697089 CDS
T08457
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116697089
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Protocadherins
116697089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
116697089
NCBI-ProteinID:
XP_032384292
LinkDB
All DBs
Position
10:complement(17604049..17610746)
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AA seq
1008 aa
AA seq
DB search
MDHRLPKGSWVPVTGLVVCLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVA
KLSARRFRIVSGAKRQYLEVNLENGILFVNEKIDREDLCERSPSCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNLDITESAAPGSCFPLESAQDQDVGTNSLRSYQLSANEH
FVLNIQTRNDGSKFAELVLDTPLDREQQKKHEMVLTAFDGGSPERSGTALITVTVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFSVDP
YTGEIRVKGIVDYEKSSVYELYVQAKDRGPLAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSEFLDRET
VSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFSQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNITVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGYLVTKITALD
ADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRLVEKDATRQRLVILVKDNGQPPLS
ATVSILLTVVDSVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAIIVLAVIKC
YKDRETISGYNLPPLACCCCGGFQPDPPPEVFKKSNLNLQISSTAKVPTNCMEVNGNSSL
SQSYCYKVCLTPESAKSDFMFLKPCSPGSTPRNNEAKSAENSWNAQSRSASVNNGATTPN
ELKQPNTDWSLTKNQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMGPGQYWTWGTHMR
GMKDYKMSPSTTGVPSRPWTPRCTPPPQQQQPSIPPHPHLHPPPHPPPDYHHNVYIPGTP
SGFCTLRPAAPRSELDVHNSFSTFGKKRRLQMSPQGEAAIINNDLYND
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggatcacagactccccaaaggcagttgggtaccagttactgggctggttgtatgtcta
cttttgtgtgcgtgtgtagtggacttggttcttgcacaaattcggtactccattccagaa
gagctggagcatggagcttttgtgggaaacatcgccgaagacctgggcttggatgtggca
aagctgtcagcccgccggtttcgtatagtctccggcgcaaagaggcaatatttagaagtg
aacttggagaatggtattctcttcgtcaacgaaaagatagacagagaggatctgtgtgaa
cgaagcccgagctgttttttacacttacaagtggtaattgaaaatccattagaactgtac
agagtggaagtagagattttagatgtgaatgacaactcccctagtttcccatggagcgag
tttaatcttgacatcacagaatcggcggcgccaggctcttgtttccctttagagagcgca
caggatcaggacgtgggcaccaactctctgcgctcctaccagctaagcgcaaacgagcac
tttgtactgaatatccagacgcgcaatgatggaagcaagtttgcggagctcgtgctggac
accccactggaccgggaacagcagaaaaagcacgaaatggttttgactgcctttgatggg
gggtcaccggaacgctctgggacagcactgataactgttacagtgttggacgcaaacgat
aacgtgcccgtatttgatcgatcagtgtaccgggcaagtctggtggagaacgcaccgagg
gggacgctggtgctgaagctgaacgccacagacctggatgagggctcgaatggggaggtg
acctacgcgtttagcgggcacgcacccctcaaggtgcgcgaactgttcagcgtggatcca
tacactggtgaaatccgagtgaagggcattgtggactatgagaaatccagcgtatatgag
ctgtatgtgcaggcaaaagacaggggacccttggctgtggcagtacacagcaaagtgctg
gtagacatcctagatgtgaatgacaacgcgcccgaagtcatcctcacatcagtgtctact
cctgtccaggaagacgcgccaccgggcacggtgatagctgttatcagtgtaatggatcgg
gactcgggagagaacggaaacgttgactgccagattccgagcaacgttccctttcagctc
cattcatcttttaaaaactattatactctggtgacaagtgagtttctggacagggaaacg
gtgtcagagtacaacatcaccctcacagcccgagatttgggctctccttcgctctccacc
aggaaaactatcctcgttcaagtatctgacattaatgacaaccccccgcgattctctcaa
ccttcatatacagtttatgtgaccgaaaataatgccccgggcgcttccatttgctctgta
actgcatttgaccccgattctaatcagaacgcctatctttcttattctattctcgagggt
cagattcagggcatgcccgtgtccacttatgtctcaatcaactctgacaacggcaatatc
tacgcactgcgctcttttgattatgagcaacttagaaactttcagattctggtacaggcg
caggacgctggtttcccccctctcgccagtaatatcacagtcaacgtctttgtcttggac
cagaacgacaatgcacctgttattgtatccccgctgccaaaaaacggcacagtggcaaca
gaggtggttccgcggtcagtagatgctggctatctggttaccaaaataacagcgttagac
gcggacgccgggcaaaactcgcggctgtcctatcaggtgttgcaagctacagacccaggg
ctgttcagtgtggctctgtacacgggcgaaatcaggactattcgccggctagtggaaaaa
gacgcaacaaggcaaagactggtaatattagtcaaggacaatgggcagccgccgctctct
gccacggtctccattctcctcacagtggtggacagcgtgcctgagtcgctgtcagatttc
ggagacctcacactcagcccacagcccccctcaaacctcgctctctacttgatcgtgtca
ctgagcacaatatctttaatattccttgtggctattatcgtgctggctgtgatcaagtgc
tacaaggacagggagaccattagcgggtacaacctccccccgttggcctgctgttgctgc
ggggggtttcagcccgatccgcctccagaggtgttcaaaaaatccaacctcaacctgcag
atttcatccacggccaaagtgcccacgaactgtatggaggtgaatggaaacagcagtctc
tctcagtcatattgttataaagtctgcctaactcccgaatctgccaaaagtgactttatg
tttctgaagccgtgcagccccggcagcacgccgaggaacaacgaagcgaagagcgctgaa
aactcgtggaacgcgcaaagccggagcgcatctgtgaacaacggagcaactactcccaat
gagctgaagcagccaaacacagattggtccctcacaaagaatcagaactcctccattaaa
agttataactctatcaacatggatggcaccctcatgcgtaaggcaatgcatgcagaccca
gaaaactatgtcacctccatggggccaggacagtactggacctggggtactcacatgaga
gggatgaaagactataagatgtctccttcaaccactggggtcccctctcgcccctggact
cctcggtgcacacctcccccccaacagcagcagccatcaatcccaccccaccctcacttg
catcctcccccacacccaccacctgactaccaccacaatgtgtacatccctgggacgcca
tcaggattttgcaccctgaggcccgcagcacccagaagcgagctggatgtccacaattcc
ttctctacctttggcaagaagcgacgtcttcagatgtctccccagggagaggctgcgatt
ataaataatgacctgtacaatgactga
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