Etheostoma spectabile (orangethroat darter): 116697167
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Entry
116697167 CDS
T08457
Symbol
gabrb2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116697167 (gabrb2)
04082 Neuroactive ligand signaling
116697167 (gabrb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116697167 (gabrb2)
Ion channels [BR:
esp04040
]
Ligand-gated channels
GABA-A
116697167 (gabrb2)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
116697167
NCBI-ProteinID:
XP_032384390
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Position
10:complement(19526112..19568744)
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AA seq
526 aa
AA seq
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MGRIRKNHFGILTFSLLVTFVWAQSVKDLKDPSNMPLVKETVDRLMKGYDIRLRPDFGGA
PVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGEGAVSGVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQKKAAEKAATANNEKLRPDPN
KWLVGNVVQRDDALYARMKQREIDAYDSMWDPIFVDDAALGLGEQRNKMTPDDNILFSTL
EMKNEMGGGGDLSRGLGAPGDPRNTMLAYDSSTLQYRRXXXXRQNYGHSALERHAQKKXX
XXRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYVH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatcaggaaaaaccactttgggattttgactttttctttattagtgactttt
gtctgggctcaaagcgtcaaggatctcaaagatccgagcaatatgcctctggtaaaagaa
acagtggacagactgatgaaaggatacgacattcggttgaggccagatttcggaggtgcg
ccggtggcagtgggaatgaatatagacatagccagcatagacatggtgtctgaagtcaat
atggactacaccttgacgatgtacttccagcaagcgtggcgggacaagcgcctgtcctac
tctgagatcgcctacaacctgactctggataaccgagtggcagatcagctgtgggtcccc
gacacctacttcctcaacgacaagaagtccttcgtacacggcgtcaccgtcaagaacagg
atgatccgtctccaccctgatggcacggtgctttatggactcaggatcaccacaactgca
gcctgcatgatggacctgcgccgctaccctctagatgagcaaaactgcaccctggagatt
gaaagctatggctacaccacagatgatattgagttttactggcgaggtggagaaggcgcc
gtgtccggggtcgacagaatagaactgccacagttctccattgttgattataaactcatc
tctaaaaacgtggtcttctctacaggttcctacccccgcctgtccctcagcttcaaactg
aagaggaacattggttacttcatcctgcagacatacatgccttccatcctgattaccatc
ctttcctgggtctccttctggatcaactacgacgcctcagctgccagagttgccctgggg
atcactacggtgctgaccatgaccaccatcaacacccacttgcgagagacgctcccaaag
atcccctacgtgaaggctattgacatgtacctgatgggctgctttgtgtttgtcttcctg
gccctgctggagtacgcctttgtcaactacatcttcttcggccagggccctcagcgacag
aagaaggcggctgagaaagcagccacggccaataatgagaagctgagacccgaccccaac
aagtggctggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaacag
agggaaattgacgcgtatgactcgatgtgggatcccatctttgtggacgatgccgcatta
ggactaggcgagcaaagaaataagatgactcctgatgacaacatcctgtttagcaccctg
gagatgaagaatgagatgggtggtggcggtgatctctcccggggtctgggagcacccgga
gacccccgtaacaccatgctggcctatgatagctcgacgctgcagtaccgcagggnnnnn
nnnnnccgccagaactatggccatagcgccttggagcgccacgcccagaagaagtnnnnn
nnnnnaagacgggcctcccagctcaaggtgaatatcccagacctgtctgacgtgaactct
attgataagtggtccaggatgatcttccccaccgtcttctccttcttcaacgtcgtctac
tggctctactacgtccattaa
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