Etheostoma spectabile (orangethroat darter): 116697251
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Entry
116697251 CDS
T08457
Symbol
rexo5
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116697251 (rexo5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esp03009
]
116697251 (rexo5)
Ribosome biogenesis [BR:
esp03009
]
Eukaryotic type
Pre-60S particles
RNases
116697251 (rexo5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
116697251
NCBI-ProteinID:
XP_032384467
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Position
2:complement(25084338..25096527)
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AA seq
806 aa
AA seq
DB search
MEPSSSSATCIRRKRKAIAPSAHEEAKRVKTVRESEELLECGHSSRSQRISVLPDRLHQP
ITPDELTELLHYAALGKTGGIKQPSWCRLRHQKKVEAVNVVIVEGLTQSHFYKHYLSLRH
LRTNYTTRLTFTPSADLASGIFSSEVPKSAFPILFQKHNGSSELHKALRCHPVITKFGTQ
RRGLTAYVLTQEEMIKKHYPVKGMPGFEEYVSTDSDDSVTDDSPLYGIDCEMVQTEKGYE
LARVSLVDSDGNCVLDDLVKPLNRIFNYLTRFSGITAKMLQPITTTLRDVQVKLRKLLPS
DAVLVGHSINNDLAALKLIHQHVIDTALLYRKEFGQKFKLKVLAETVLKRQIQIEEKKGH
NPTEDALAALELAQYFIKTGPRQVVELHMEELWGHAIVEEESTVSNLPAPTPSPRFADIL
RTLGRSVAFLGKRCDIALDLSHQQWQNSDKEVLASFRRLTKCPYFSVLQLSSLSDHLKRS
YPRLEHQHQRVCAHLRDMCVVFAGPFPAAFSERDVRRLFCCCGPVRNIKMLNTSVRVHAE
VEFELLEGAMLALKTLNGLNMQGQSIKVQRPVYESMLDLDLTLDTLTCDSLNTSHLYTVK
LNPSGAESIQFSARVNGHTSDAKCSVKTANGLPSVKVNGQRPHPTTTTKSKLTEETVRET
FGHFGKVERVVLLAKPGKRAKHAYIKFESSEGKHVALSCSEDLWKEKYLVCPSLTPPHLP
SWIAMTTTITTVEPEIEAAEDEEKTHMHTSSQDQEMDFMMGKLDCRLRKLFRSLPEGTLS
VVVLLGHTSAHGYLPGLCLMEVKQGS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggaaccttcatcatcatcagcaacatgcatcagaaggaaaagaaaagccatcgccccc
tcagcacatgaggaggccaagagagtaaaaactgtgcgggagagcgaggagctgctggag
tgtggacactcctcccgctctcagaggatctcagtgttgcccgatcgccttcatcaacca
attacaccggatgagctgacagagctgctgcattatgctgctctggggaaaacaggtggc
attaaacagcccagttggtgtcgtctccggcatcagaagaaggttgaagctgtgaacgtg
gtgatcgtggagggcttgacccagagtcacttttacaaacactacctcagcctgcgacac
ctcaggaccaactacacaactaggctcacctttactccatctgctgacctggcgtcagga
atcttcagcagtgaagttcctaaatcggcttttccaattcttttccaaaaacacaatgga
tctagtgaactgcacaaagcacttaggtgtcacccagtaatcaccaagtttgggacacag
aggagaggactgacagcgtatgtgctcacccaggaggagatgatcaagaaacactaccct
gtcaaaggaatgccaggttttgaggagtatgtctccacagacagtgatgacagcgtgacc
gacgacagccctctgtatggaattgactgtgaaatggttcaaacggaaaagggatatgag
ctggctcgtgtctctctggtggacagtgatgggaactgtgtcctggacgatctggtgaaa
cctctgaaccgaatcttcaactacctcaccaggttctctggtataaccgcaaagatgttg
cagccaatcacaaccaccctgcgggacgttcaagtgaagctcaggaagttgttgccgagc
gacgcagttctggtgggacattccataaacaatgacctggcggctctgaaactgatccac
cagcatgtgatcgacaccgcactgctgtacaggaaagagtttggacagaagtttaaactg
aaggtcctggcggagaccgtgttgaagaggcaaatacaaattgaagaaaagaagggtcat
aatcccactgaggatgctctggcagccctggagctggctcagtactttattaagacagga
cctcgtcaggttgtagaacttcatatggaggagctgtggggacatgcgatagtggaggag
gagtccactgtctctaacctgcctgcacccacaccaagtcccaggtttgctgacatacta
aggacactcggccggtcggtagcctttctaggaaagcgttgtgacatcgccctggatctg
tcccatcagcagtggcaaaactcagacaaagaggtgttggcctctttccggagactgacc
aagtgtccgtacttctcagtgctccagttgtcttccctctcggaccatctgaagaggagc
taccctcgtctggagcaccagcaccagagggtgtgtgcacaccttcgagatatgtgtgta
gtgtttgccgggccgtttcctgcggctttctctgagagggatgtgaggcggctgttttgt
tgctgtggaccggttcgaaatatcaaaatgttgaacacaagtgtcagggttcatgcagag
gtagagtttgagctgcttgagggagctatgctggctttaaaaacgctgaatggacttaac
atgcaaggacagtccatcaaggtccagaggcctgtttacgagtcaatgctcgacttggac
ctgactcttgatactttgacgtgtgacagtctcaacaccagtcacctctacactgttaaa
ttaaaccccagtggcgctgagagcatacaattttctgccagggtcaatggacacacgtca
gatgccaaatgttctgttaaaacagcaaacgggttgccctcagtgaaagtgaacggtcaa
cggccgcatcccacgactaccacaaagtctaaactgaccgaggagacggtcagagagacg
tttggtcactttggtaaggtggagagagtcgtcctgcttgccaaacctggaaaacgtgca
aaacatgcatacataaagtttgagagctcagagggcaaacatgtagccctcagctgctcc
gaggatctctggaaggaaaagtacctcgtctgtccatccctcactccaccccacttaccc
tcgtggattgccatgacgacgacgatcaccacagtggaacctgagattgaagcagcagaa
gacgaggagaagactcacatgcacaccagttctcaggaccaggaaatggatttcatgatg
gggaagttggactgccgcctacggaagctcttcagatctctcccagaaggcaccttgtct
gtagtcgtcctgctcggacacaccagtgctcatggctaccttccgggtttgtgcctcatg
gaggtcaagcaagggtcttga
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