Etheostoma spectabile (orangethroat darter): 116697392
Help
Entry
116697392 CDS
T08457
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116697392
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116697392
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116697392
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116697392
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Protocadherins
116697392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF2207
Motif
Other DBs
NCBI-GeneID:
116697392
NCBI-ProteinID:
XP_032384627
LinkDB
All DBs
Position
10:complement(20648668..20652138)
Genome browser
AA seq
891 aa
AA seq
DB search
MKYAFSCTGLGCCLRPQRSLTAGGTWVTCVSAMGHGTPDNMNWAGLLQNLLVMVHLQQII
CGSVWFSIPEEQEPGVLVGSLSKHFPPPYQLLTQEYLWTDKNTGNFYTTEQKMDREALCP
EETKAEECIILHNAVVGPSGDLIQFPVIIEDINDNAPHFENSVIHLRVSEDVTVGTSFLL
DDQAQDRDAGHNGKLHYHLKDADGVFSLKVEEDESAILLVVQTALDRETRDLYQMVLVAT
DCGSEPLSATATLIVTVTDVNDNCPSFSSDSPRSVTVPGDSPKNMLVAQVRATDPDSGPN
AAIVYSLSPKVSERAKKLFSLDSLTGHIRLTQDLQSDNTEELQLKVFASGHHCPPADTQV
TVNVLPKANQELTFKIRFIAEHQNQTVVLPENQPPTVLAVLELHGDSSLKSSSLAIESEV
PFTLSPQNGKYLLSTSKPLDYEMKIEHHISVVVHGRSAEGSVIAPSRHGIRVLVADVNDN
APQFLQSHYQLEVEENNQPGMSLLRVSASDADSGRNGRVTYRLGKHTPTIFNIDPVTGQL
SVSASLDREQQGVHKITVFAQDSGSPPLESVATVSIRVLDLNDNAPVFLTPHFIFFIPEN
VPPFAQVGRVGVTDPDEGENGKTELHVVNSSGPFVVDNTQGTLRTTTHLDRETDDRYELY
LLAADHGHPAALTSTARVTIFVEDINDNEPKVILPSSNSSCQTVSSATIAGTIVTKIYAV
DEDSGLNSEITYTVVAPKPAQNSSPFRVDLKTGNITVAQKLLRKDLGMHHLFIVVRDGGK
PAPLYTTIWVNLLINESMGPCHLDRAPTWTGTSDLIQSPSKAPICEVEDTRSAQLTLFVG
LVMMLVSTCLLVVTAVLYVKQKRRSLQQKKRGHIEENEIPLRHKDKYYSDD
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgccttcagctgcacaggtttaggctgctgcctccgtcctcagcgttcactc
actgccgggggaacttgggtaacatgtgtgagtgcgatgggccatgggactcctgataat
atgaactgggctggactactgcagaatttgctggttatggtccatctgcagcagataata
tgtggttctgtctggttttctatcccagaggaacaggagcctggtgttctggtggggtca
cttagtaaacactttccacctccttaccagctcctgacccaggaatatctgtggacggac
aaaaacacgggaaatttctacaccactgagcaaaagatggatcgcgaggccctctgccct
gaggagacaaaagctgaggaatgcattattttacacaatgctgttgtggggccctctgga
gaccttatacagttccctgtgatcattgaggacatcaatgacaatgcacctcattttgaa
aacagtgtaatacacctaagggtgtcagaggacgtgactgtggggaccagtttcttattg
gatgaccaggctcaggacagggatgccggacataacggcaagcttcattaccacctaaaa
gatgccgatggagttttcagtttaaaggtggaagaagacgaatccgccatcctgctggtt
gtgcaaacagctctggatagggagactcgggacctgtatcagatggtgctggtggccacc
gactgtggctcagagcctttaagtgccacagcaactttaatagtcacagtgacagatgtt
aatgacaactgtccaagcttcagctctgacagccctcgcagtgtcaccgtccccggagac
tccccaaagaacatgctggttgctcaggtcagagccacagacccagattcaggtccgaat
gctgccatcgtatactccctcagtcccaaagtctctgagcgggccaagaagctctttagc
ctcgacagcctcactgggcacatcagactaacacaggacctccagagtgacaacaccgag
gagctgcagttgaaagtgtttgctagcggccatcactgccccccagcagacactcaggta
acagtaaacgtgctccccaaggcgaaccaagagctgacgttcaagatcaggttcatagca
gagcatcaaaaccagactgtggtgttaccagagaaccagccccccaccgtcttagcagtt
ttagagcttcatggtgacagcagcttgaaaagctcatctcttgccattgagagcgaggtg
cctttcaccttaagcccacagaatggcaaatatctgctttccacatcaaagccccttgac
tatgagatgaaaatcgaacatcatatttctgtggtagtgcatgggagatcagctgaagga
tctgtgattgctccgtctaggcatgggattagggtgttggtggcagatgtcaatgataat
gccccacaattcctccagtcacactaccagctggaggtggaggaaaacaaccagcctggg
atgtcactgctgcgggtctcagcgtcagacgcagacagtggacgcaatggcagggtgacc
tacaggctgggcaaacacacgcctaccatatttaacattgacccggtgaccggtcaactg
tcagtgtcagcctctctagatagagaacagcagggtgtacacaaaatcactgtgtttgcc
caagatagcggctctcctcccttggagtcagtggccacagtatccattcgtgttctggac
ctgaatgacaatgcacccgtttttctaacccctcacttcatcttttttatccccgagaat
gtaccaccgtttgcccaggtggggagggttggggtgacggacccagacgaaggagagaat
gggaaaacagagttgcatgttgtaaacagcagtggaccttttgttgtggataatacccag
ggaacactgcgcaccaccacccacttagaccgcgagacagacgaccgctatgaactctat
ctgcttgctgccgatcacgggcacccagccgctttgacttccactgccagggtcactatc
tttgtggaggatatcaatgacaacgagccaaaagttatccttccaagcagcaactcctca
tgccagacggtctcgtcagcaaccattgcaggcaccatagtaacaaagatctacgctgtt
gacgaggactctgggctgaattcggagattacatacactgttgtggcgccgaagccagcg
cagaacagcagccccttccgggtggatttaaagacggggaacatcaccgtagctcagaaa
cttctacggaaagacctgggaatgcatcacctgttcattgtggtcagagatggggggaaa
ccagctccactttataccaccatctgggttaatctgttgatcaatgagagcatggggccc
tgccacttagacagagcccccacctggacagggacatctgacttgattcaaagcccctca
aaggcccccatctgtgaggtggaggacaccagatctgctcagctgacactgtttgtaggc
ctggttatgatgctggtgtccacatgtttgcttgtggtgacagctgttttgtacgtgaag
cagaagagaagaagtctacaacagaaaaagagggggcacattgaggagaatgagattcca
ctcaggcacaaagacaaatattactctgacgactaa
DBGET
integrated database retrieval system
