Etheostoma spectabile (orangethroat darter): 116697398
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Entry
116697398 CDS
T08457
Name
(RefSeq) caltractin-like
KO
K10840
centrin-2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116697398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116697398
03036 Chromosome and associated proteins [BR:
esp03036
]
116697398
03400 DNA repair and recombination proteins [BR:
esp03400
]
116697398
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
116697398
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116697398
Centrosome duplication proteins
Centriole replication proteins
116697398
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116697398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
EF-hand_5
AIF-1
EF_EFCAB10_C
EH
Dockerin_1
SUB1_ProdP9
DUF7645
EF-hand_14
SurA_N_3
HerA_C
SurA_N_2
RPN1_RPN2_N
SRI
DUF5580_M
LETM1_RBD
MgtE_N
MJ1010-like_2nd
Motif
Other DBs
NCBI-GeneID:
116697398
NCBI-ProteinID:
XP_032384634
LinkDB
All DBs
Position
10:complement(20600762..20603182)
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AA seq
174 aa
AA seq
DB search
MATSAKRPSLQGPVAPPRKKTTPKPELTEEQKQEIREAFELFDTDGSGYIDVKELKVAMR
ALGFEPKKEEIKKMIGDVDRDGTGKISFADFLSVMTQKMAEKDSKEEILKAFRLFDDDET
GKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNQQEFLRIMKKTCLY
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagtgctaagagaccgtccctgcagggtcctgtggcacctcctcgcaagaag
acgacccccaaaccagagctgaccgaggagcagaagcaggagatcagggaggcttttgag
ctgtttgacaccgatggatctggatacattgatgtcaaggagctcaaggtggcaatgaga
gcgctggggtttgaaccaaagaaagaggagatcaagaagatgattggtgacgtggatagg
gacggcacagggaaaatctccttcgctgacttcctctctgtcatgacacagaaaatggcc
gagaaggactccaaagaggagatcctgaaagctttccgcctgtttgatgacgacgagacg
ggcaagatctcgttcaagaatctgaagagggtagccaaagaactgggagagaacctcaca
gatgaagagctgcaggaaatgatagatgaagccgacagggatggtgacggagaagtgaac
cagcaagagttcctgcgaattatgaagaaaacctgcctctactga
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