Etheostoma spectabile (orangethroat darter): 116697613
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Entry
116697613 CDS
T08457
Symbol
dync1i2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04145
Phagosome
esp04814
Motor proteins
esp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116697613 (dync1i2)
09142 Cell motility
04814 Motor proteins
116697613 (dync1i2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116697613 (dync1i2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116697613 (dync1i2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
esp04812
]
116697613 (dync1i2)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
116697613 (dync1i2)
Cytoskeleton proteins [BR:
esp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
116697613 (dync1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML
Dynein_IC2
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF4
WD40_RFWD3
Nbas_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
116697613
NCBI-ProteinID:
XP_032384833
LinkDB
All DBs
Position
11:complement(8902409..8919127)
Genome browser
AA seq
638 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKQAADQFKEAAQHQDDSDLEKKRREAE
ALLQSMGITSETPVVPPPISPTTKSVGTPSEAGSQDSDGAVGPRTLHWDSDPSTLQLHSD
SELRYWTLSSLLSWRGTPKLGMAKVTQVDFPPRETVSYTKETQTPVMTQQKEEEEEEEEI
AAPQPVVETQTEKPDQKEEEEEAPPHELTEEEKLQILHSEEFVNFFDHSTRIIERALSEH
VDLFFDYSGRDLEEKEGEIQAGTKLSLNRQFMDERWSKHRVVTCLDWSLQYPELLVASYN
NNQDAPHEPDGVALVWNMKYKKATPEYIFHCQSAVLSAAFAKFHPNLVVGGTYSGQIVLW
DNRSNRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQD
SMELVFKQSKAVAVTSMSFPLGDVNNFVVGSEDGSVYMSCRHGSKAGISEMFEGHHGPIT
GIHCHTAAGPLDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALF
ACVDGVGHLDLWNLNNDTEVPTASVTVEGNPALNRVRWAHSGREIAVGDSDGRVLVYDVG
EQTAVPRNDEWTRFVRTLAEINENRDDAEELAAPRLAA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagtgagctgaaagcagagcttgaaagaaagaagcaacgcttggcacaa
atcagagaggagaagaaaaggaaggaggaggagcgcaagaagcaagcggcagaccaattt
aaagaggctgcgcaacaccaagatgattctgacctggagaaaaaaagacgtgaggctgag
gctcttctacagagtatgggcataacctcagaaactcctgttgtccctcctcccatctct
ccaactaccaaatcggtgggcacaccaagtgaagcagggagccaagactctgatggagcc
gtgggacccaggactctgcactgggactctgacccgtccactcttcaacttcactctgat
tctgagctgcggtactggacactctcttctctcctttcctggcgtggaactccaaaactg
ggaatggccaaagtcacacaagtggactttcctccacgtgaaactgtgtcctacacaaaa
gagacccagacacctgtcatgactcagcaaaaagaagaggaggaagaagaggaagaaatt
gctgcacctcaaccggtagtggagactcagactgagaaaccggaccagaaagaggaggag
gaggaagcacccccccacgagctgactgaggaggaaaaactccagatcctacactctgaa
gagtttgtgaatttcttcgaccacagcactcgcattattgagcgggctctatcagagcat
gtggaccttttttttgactacagcggccgtgacctggaggagaaggagggtgaaattcag
gccggaacaaagctctccctcaacaggcagttcatggatgagcgctggtccaagcatcgt
gtcgtcacctgcctggactggtcccttcagtatcctgaactcctggttgcctcatacaac
aacaaccaggacgctcctcacgagccagacggcgtggccttagtatggaacatgaagtac
aagaaggccacaccggagtacatcttccactgtcagtctgcggttctgtcggctgcgttt
gccaagttccaccccaaccttgtggtggggggcacatactcagggcagattgtactatgg
gacaacaggagcaacaggaggaccccggtgcagaggactccgctgtcagcagcagcacac
acgcacccagtgtactgtgtgaatgtagttggcacccagaatgctcacaacctgattagc
atatccactgatggcaagatttgctcctggagtctggacatgctctctcagccacaggac
agcatggagctggtgttcaagcagtccaaagctgtagctgtcacctccatgtctttccct
cttggagatgtcaacaatttcgtggtgggcagtgaggacggctctgtctacatgtcgtgt
cgtcatggaagcaaagcaggcatcagtgagatgtttgagggccaccatgggcccatcaca
gggattcactgccacacagctgcagggcctctggacttctcccacctgtttgttacctcc
tcttttgactggactgtcaagctgtggagcaccaagaacaacaaaccgctttactcattt
gaagataactcggattacgtgtatgacgtcatgtggtctcccactcaccctgctctgttt
gcttgtgtggacggagttggccatcttgacctgtggaacctcaacaacgacacagaggtt
cctaccgccagcgttactgtggagggtaacccggcgcttaacagggtcagatgggctcat
tctggcagagaaatcgctgtgggagactctgatgggcgagttcttgtgtatgatgttgga
gagcaaactgcggttccacgaaacgacgagtggacccgttttgttcgcacgctggcagag
atcaacgagaacagagatgatgcagaggagctggcagctccgcgcctggctgcctga
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integrated database retrieval system
