Etheostoma spectabile (orangethroat darter): 116697627
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Entry
116697627 CDS
T08457
Name
(RefSeq) acetylcholine receptor subunit alpha-like isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
esp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116697627
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116697627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116697627
Ion channels [BR:
esp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
116697627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Claudin_2
Motif
Other DBs
NCBI-GeneID:
116697627
NCBI-ProteinID:
XP_032384859
LinkDB
All DBs
Position
11:8552236..8559708
Genome browser
AA seq
457 aa
AA seq
DB search
MPSITSMRLCGVFFILGAAWASSDETRLVKTLFTGYNKVVRPVNHFKDSVVVTVGLQLIQ
LISVDEVNQIVSSNVRLKQQWKDVNLQWNPEDYGGIKKIRVPSTDIWRPDLVLYNNADGD
FAIVHETKVLLEYTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVN
PDSDRPDLSNFMESGEWVMKDFRGWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVI
IPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYML
FTMVFVIASIIITVIVINTHHRSPSTHTMPNWVRKVFIETIPNIMFFSTMKRPGKENKTK
SSIYGADFDISDISGNQTSSVPYQSPITKNPDVRSAIEGVKYIAETMKSDEESNNAAEEW
KFVAMVLDHILLCVFMAVCLIGTLGVFAGRLIELSML
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgataacatcaatgaggctgtgtggtgtgttttttattttaggtgctgcctgg
gcctcctctgatgaaacacgtctggtcaaaaccctcttcactggctacaacaaggttgtc
cgtcctgtcaatcacttcaaggactcggtggttgttactgtgggccttcagctcatccag
ctcatcagtgtggatgaggtcaaccagatcgtcagcagcaacgtgcgactgaaacagcaa
tggaaagatgtgaacttgcagtggaacccagaggattacggtggcatcaaaaagatcaga
gttccctctactgacatttggcggcctgatctggttctctacaacaatgctgatggagac
tttgccatcgttcatgagaccaaagtgctgctggagtacacaggaatgatcacatggaac
ccacctgccatcttcaagagctactgtgaaatcattgtgctgcatttcccctttgacctc
cagaactgcagtatgaagctgggtacctggacctacgatggaaacttggtcgtcgtcaat
cctgacagtgaccgccctgatctgagtaactttatggaaagtggagagtgggtgatgaag
gatttccgcggctggaagcactgggtgtactacgcttgctgcccggacacaccttacctg
gacatcacctaccacttcctcatgctgcggctcccactgtacttcatcgtcaatgtcatc
atcccctgcatgctcttctccttcttgactggccttgtcttctatcttcctacagactct
ggtgagaagatgactctaagcatctctgtcttactgtctctgactgtgttcctgttggtc
attgtggagctgatcccctctacctccagtgctgtaccgctcattgggaagtacatgctc
ttcaccatggtcttcgtcattgcctccatcatcatcactgtcattgtcatcaacacccac
caccgctcccccagcactcacacaatgccaaactgggttcgtaaggtttttattgaaacc
attcccaacatcatgttcttctcaacaatgaaacgcccagggaaggaaaataagactaaa
tctagtatctatggtgctgattttgacatctcagacatctctggcaatcagacctcttct
gttccctaccagtcacccatcaccaagaaccctgatgtccgcagtgccattgaaggagtc
aagtacatcgcagaaaccatgaaatcagatgaggaatccaacaatgcagctgaagagtgg
aagtttgtggccatggtgttggatcatattctgctgtgtgtgttcatggctgtctgtctc
attggcacgttaggtgtgtttgcgggccgtctaattgagctgagcatgctctaa
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