Etheostoma spectabile (orangethroat darter): 116697659
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Entry
116697659 CDS
T08457
Symbol
ttf2
Name
(RefSeq) LOW QUALITY PROTEIN: transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116697659 (ttf2)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116697659 (ttf2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
116697659
NCBI-ProteinID:
XP_032384905
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All DBs
Position
11:complement(423890..438976)
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AA seq
1140 aa
AA seq
DB search
MEKTLCNVHGSVCMLKTGVKDGPNKGKSFYVCVDKQGCDFTQVASISPSHCLQHEDSMVE
LQALTYSLQQQSHRLFYRCVVGKKVGQRWCGTVPWTAPEKEKRTPLSDTQLQPSCLPPVL
NPFKVSSKTDKDSEWTRVQQGGGDKKRTDFKDSEASHKAESREGCQKENVQSVNAGVEEE
EAGKLNTADSYRGKQLPPGMTLKKRVTDEERNSCKAKNVEKTTDTLQDMTKENQKAENKI
SNSSVKAVHPEKINQTLQSSHKDSPHQATNGKTCPVEQTDPAVKKSISKCAPGSRGSDTT
RDLASTKTAQLESSQTKIHQDDDDDVVVVSVKPATQKTPPVTAVQKTLTNFAGFQPSSKM
KVQHEAPKGLHSLLTAQLQQKKATLSVVNVAALPDKGERLRTQVKELEDALESLSLTAAS
QPESQSERNSGDASLGSSQVNPFSRQGGAILLPAPGPSQHQASGSSLGLQLSQGYTQMCG
ANPQVAGGLYGGRMTHDRLLAVKNATCEAIDHLHKSLESCPDAEAEVPDPKGIKVSLLAH
QRRALAWLLWRETQNPXGGILADDMGLGKTLTMIALILAKKIKAKGEVEKKEEKKPVSWF
SKTDSSLVVSKGTLIICPASLVHHWKREIDRHVKTGKLTVYLYHGPNREKSAKLLADYDV
VVTTYSLVSKEIPVQKEDGERPSKDADDVSLRSAPLLRVTWARVVLDEAHNIKNPKVQTS
MAVCQLGARARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEYKLWKAQVDNGSNRGRERLN
ILTRTLLLRRTKDQKDSTGRPLVSLPGRSCEVHQLKLSQDEQAVYDVVFAQSRSTLQNYL
KRHEGNDVKNGNASSSNPFDKVAQEFGLSQADPAVSSSQQLQPASSTVNILSLLLRLRQC
CCHLSLLKKTLDTSELQGDGIVLSLEEQLNALSLTSSPSAPGTPTNDTVALNGTRFSSQL
FEDTSESTKIAAIVSELKAIRQKSSDQKSVIVSQWTSMLKIVAVHVQRMGLSHAVIDGTV
NPKRRMDLVEEFNTNPHGPQVMLVSLCAGGVGLNLIGGNHLFLIDMHWNPALEDQACDRI
YRVGQSKDVTIHRFVCDGTVEDKISTLQAKKKELAQNVLSGTGSTFSKLSLADLRIIFGV
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggagaagactttatgtaatgttcacggcagcgtgtgtatgttaaaaacgggcgttaaa
gatggaccaaataaaggcaaaagcttctacgtctgcgttgacaagcaaggctgcgatttc
actcaagtggccagcatctcaccatcccactgcctccaacatgaagattcgatggtggaa
ctccaagctctcacctacagtctgcaacagcagagccacaggttgttctacaggtgtgtt
gtgggcaaaaaagtaggccaaagatggtgtggaaccgtgccttggactgcaccagagaaa
gaaaagagaacccctctttctgacacacagctacagccctcttgcctgccgcctgtccta
aacccctttaaagtctccagcaagacggacaaggactctgagtggaccagagtgcaacaa
ggtggaggtgataagaaaagaaccgatttcaaagacagcgaggcaagtcacaaggctgaa
tcaagagaggggtgtcagaaagaaaatgtgcagagcgtaaatgcaggagtggaagaagag
gaggcagggaagctaaatacagcggattcttacagaggtaaacaacttccaccggggatg
acgttaaagaagagagttacagatgaggagagaaacagttgcaaagctaagaatgtggaa
aaaacgacagatacgttgcaagacatgactaaagagaaccagaaagcagaaaataagatt
tctaactccagtgtcaaggctgttcacccagagaaaataaatcagaccttacagagttct
cacaaagactcgccccaccaagcaactaatggtaaaacctgtccggtggaacaaactgac
cctgctgtaaaaaagagtatctctaaatgtgcacccggttccagaggctctgataccacc
agggaccttgcatctaccaaaacggcacaattagagtccagtcaaaccaaaatccaccaa
gatgatgatgacgatgtagtggtggtgtcagtgaaacctgctactcagaaaactcctcct
gttactgctgttcaaaagacactgaccaacttcgctggatttcagccaagttctaagatg
aaagttcagcatgaagctcccaaagggctgcacagcctgctcactgctcaactccaacag
aaaaaggcgactctgtccgtggtgaacgtggcagctctgccagataaaggggaaaggttg
aggactcaggtgaaagagttggaggacgcgctggagtctctgagcctcactgctgcttct
cagcctgagtcccagagtgaacgtaacagcggtgatgctagtctaggtagcagccaggta
aacccattcagccggcagggcggcgccatcctgcttcctgcccccggtccctcccagcac
caggcctctggcagctccctggggcttcagctgagccagggatacacccagatgtgtgga
gcaaacccacaggtggcaggtggtctttatggtgggaggatgactcacgaccgtctgctg
gcggtgaaaaatgccacctgcgaggccattgaccatctccacaaatccctggagtcctgc
cccgacgctgaggccgaggttcccgacccaaagggcatcaaggtgtcgctcctggcccat
cagaggagagctttggcctggctgctctggagagaaacccagaatcccnttggaggaatt
ctggcggatgacatgggtctggggaaaaccctgaccatgattgctctcatactggccaag
aagatcaaagcaaaaggggaagttgagaagaaggaagagaagaagccagtgagctggttc
tccaaaactgactccagcctggtggtttctaagggcactctgatcatctgtcccgcctcg
ctggtccaccactggaagagggagattgacagacatgtcaagacaggcaagctgactgtg
tacctgtaccacggccccaaccgcgagaaaagtgccaaattgctggcagattatgatgtg
gtggtgaccacatacagtttggtctctaaggagatcccagtccagaaagaggatggcgag
agacccagcaaagatgctgatgatgtgtctttacgctctgctcctcttctgcgagtgacc
tgggcccgggtggttctggacgaagcccacaacatcaaaaacccaaaagtgcagacctcc
atggctgtctgtcagctgggggctcgtgcccgctgggctgtcactggtacacccatccag
aacaacctgctggacatgtactcactgctcaagtttctgcgttgttctccgtttgatgag
tacaaactctggaaagctcaggtggacaacggctctaaccgaggcagagagagactcaac
atcctgacgaggactctgctgctccgacgaaccaaagaccagaaggactccacagggaga
ccactggtgtctcttcctggtcggagctgcgaggtgcatcaactcaaactgtcccaggat
gaacaggctgtgtatgatgtggtctttgcccagtcaagatcgactctgcagaactacctg
aagagacatgaaggaaatgatgtgaaaaatggaaatgcttccagttccaatccctttgac
aaagtggcccaagagtttggtttgtcccaggccgaccctgctgtgtcgagttcccagcag
ctccaaccggcatccagcaccgtcaacatcctgtcgctgctgctgcgcctccgacagtgc
tgctgtcacctgtcacttcttaagaagactcttgacacgtcggagctgcagggcgatggc
atcgtcttgtctctggaggagcagctcaatgccctgtcactcacctccagcccctccgca
ccgggcactcccaccaacgacaccgtggcccttaatggcacacgcttctcctcacagctc
tttgaggacaccagtgagagcaccaagattgctgctattgtctctgagctaaaggcaatc
agacagaagagtagtgatcagaaaagcgtgatcgtgtcccagtggaccagcatgctcaaa
atcgtagcagttcatgtgcagaggatgggcctgagtcacgcggttatcgacgggaccgtc
aaccccaaacgccgcatggacctggtggaagaatttaacaccaaccctcacggaccacag
gtgatgctggtgtctctttgtgctggaggggttggactcaatctcatcgggggcaatcac
ctctttcttattgacatgcactggaacccagccttggaggatcaggcctgtgaccgaatt
tacagagttggacaaagtaaagatgtcaccatccacaggtttgtgtgtgatggcacagtg
gaggacaagatctccacactgcaggcgaagaagaaggagctcgcccagaatgtgctgtca
ggaacgggaagcaccttctccaaactctccttggctgatctccgaatcatttttggtgtc
tga
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