Etheostoma spectabile (orangethroat darter): 116697681
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Entry
116697681 CDS
T08457
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116697681 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116697681 (bard1)
04121 Ubiquitin system [BR:
esp04121
]
116697681 (bard1)
03036 Chromosome and associated proteins [BR:
esp03036
]
116697681 (bard1)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116697681 (bard1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
116697681 (bard1)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116697681 (bard1)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116697681 (bard1)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
116697681 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_4
Ank_3
Ank_5
BRCT_2
BRCT
zf-RING_5
zf-RING_10
Ank_KRIT1
zf-C3HC4_3
Afi1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
116697681
NCBI-ProteinID:
XP_032384945
LinkDB
All DBs
Position
11:11604000..11633290
Genome browser
AA seq
801 aa
AA seq
DB search
MENDSLVQANDWRNTKEAVANFRQLLLCSKCSNLMTEPVCLGMCEHMLCRSCAGPRAGDG
CVVCQSPAWVKDIQINRQLSSIIQLFCGLESLLNPIEQPDSPLAEIQTQPQSSVLKHKKN
FKIWFSPRSRKVRCMVEKPSEVTVPASMSSGETAATLPDALIAQCQDLSVFNFTSSSQDS
GSSCSQRCKNENRKKRSTKKNSASRKVSLQGATRTTKKQTKQTMKKNRLEAINQEWGITN
KVDALKEKEQPCAERAKRSSKRVSFQSPAVTSDKPQPEVPQGSTNELCSSRNTMRESLLG
CNITILNDQTQSGQKMLDSVRLHDKTACPEQQDKVSPPKHSSKRSRVDEKVATLETTPKR
PRASPGRRRISQMSPAVFNPLSSASPRCDKTKRIKNSGQKQGDTPSVLVTVGRKSQGTPG
ASVGRPTSGPASPVVMKRNHKGETLLHLAAIKGDVEAVKELLDQGADPNLKDNAGWTPLH
EACNLGHLAVVDVLASRGALLNTPGYENDSPLHDAVRNGHTAIVKLLLQLGASQNVLNLY
GKRPADYAVSLEILAIFKEASEGTQYANTSLSPSATLCMVSDCVRRDEMVVFLASKLSQP
EQLQVSKLGELLGGRMADTFSGSVSHVVVPEGHMPITNSTLLGLLAGCWIVKFSWVEACL
QAGKRMPEAEHEAGEGPQRSRVNRCSLLPPLFDGCFFFLLGSFKAPSKGELTKLLQEGGG
QLLSRQPKPDSDVTQTLSAAAYHALPGSDQALCTQYIIFDPQGPHKPAVVRRGKVWSAPS
TWLIDCVTAFRLLPVSIKASV
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgattccctcgtgcaggcaaatgattggaggaacactaaggaggctgttgcg
aactttagacaactgctactttgctccaaatgctcaaatttaatgacggaacctgtgtgt
ctaggaatgtgcgagcatatgctgtgcaggtcctgtgctggcccccgggcaggagatggc
tgcgttgtgtgtcagagtcctgcgtgggtgaaggacatccaaatcaacaggcagctcagc
agcatcatacagctcttctgcggtttggagtccctgctcaatcccatagaacaaccagac
tctcctctagctgagattcaaacacaacctcagagctctgtcttaaaacacaagaaaaac
tttaagatctggttcagtccccgtagccgcaaggtacgctgcatggtggagaagccttcc
gaggtcaccgtaccggcaagcatgtcttctggagaaactgccgctacactgccagacgca
cttattgctcaatgccaggacctgtcagttttcaatttcacctcatcctcccaagattct
ggctcttcttgttctcaaagatgcaaaaatgagaacaggaagaagaggtcaactaagaaa
aattctgccagcaggaaggtgtcactgcaaggagccactaggaccacaaaaaaacagact
aagcagacgatgaagaagaacaggctggaggctattaaccaggaatgggggatcaccaac
aaagtagatgctttaaaggaaaaggagcagccctgtgctgaacgggcaaagaggtccagt
aagagagtttccttccaaagccccgctgtcacatctgacaaacctcagcctgaagtgcca
cagggcagtacaaatgaactctgctctagcagaaacaccatgagagagagtctcttagga
tgcaatatcactatacttaatgaccaaacccagtctggtcagaaaatgttggacagtgtc
cgtctgcatgacaaaacagcctgtcctgaacaacaggacaaagtatctcctccaaagcat
tcatcaaaaagatctagagtagacgagaaggttgccacattggagaccacaccaaaaagg
cccagggcttccccaggccggcggagaatatcacagatgtctccagctgtgtttaaccct
ctttcttcagcaagccccaggtgtgataagactaagcgcattaaaaactcaggacaaaag
caaggagacaccccctcggtcttagtcactgttggtagaaaatctcaaggtactcctggt
gcatctgttggacggcccacctcaggtcctgcgagtcctgtggttatgaagaggaaccat
aagggagagaccctgctgcacctagctgctataaagggagatgtagaggctgtcaaggaa
ctgctggaccagggggctgaccctaacctgaaggataatgctgggtggacacctctgcat
gaagcgtgtaacctgggtcacctggcggtcgtggacgtgttggcctcaaggggggcactg
ttgaatacgcctggctatgaaaacgactctccgctccacgatgctgtgaggaacggacac
acagccattgtcaaactgctgttgcagcttggagcctcgcagaacgtacttaatctgtat
ggaaagcggcctgctgattacgcagtgagtttggagatactggcgattttcaaagaagcc
tcagaaggaacccaatatgctaatacatctctgagcccctcagccactctctgtatggtg
agtgactgtgtgaggagggatgaaatggtagtgtttctggccagcaagctgtcacagcca
gaacagcttcaagtgtcaaaactgggagagctactcggagggaggatggctgacaccttt
tctggctcagtgagccatgtcgttgtgccagaaggacacatgcccatcaccaactccacc
ctcctgggtcttcttgctggctgctggattgtcaaattcagctgggtggaggcatgtctg
caggcaggcaagaggatgcctgaagctgagcacgaggcaggagaaggcccccagcgcagc
cgtgtcaacagatgtagcttgctcccgccactcttcgatggctgcttcttcttcctcctt
ggctcctttaaggcgccttccaaaggcgagcttaccaagctgctccaggaaggaggaggt
caactcctgagccggcagcccaagcccgacagcgatgtgacacaaaccctgagtgccgcc
gcctaccacgcactgccaggctctgaccaggccctctgcacccagtacatcatctttgac
ccccagggtccccacaagccggcagtagtgaggcgaggtaaggtgtggtcagctccctcc
acttggctcatcgactgcgtcacagccttccgcctcctccccgtgtcaatcaaagcgtcg
gtctaa
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