Etheostoma spectabile (orangethroat darter): 116697684
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Entry
116697684 CDS
T08457
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116697684 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esp03400
]
116697684 (xrcc5)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
116697684 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
116697684
NCBI-ProteinID:
XP_032384949
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Position
11:complement(10901494..10910904)
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AA seq
722 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFELAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNPLAKDDQYQNITVHRHLMVPDFELLDEIENQIHPESQQADWLDALVVCMDLLQTAT
KEKKCDRLNIVFLTDLNTEASSEQLDVIINNLKKAGITLQFFLPFPAGDDVEGGGDAEGR
DPGQPGTGKGLSKEQKSGLDMVKHIMLSLDEEDGLEEIYSFSKAIEQLCMFKRIERRPMA
WPCQLTIGSCLPIRIVGYKAVTEEKLKKTWTTVDAQTNQKDDVKRETVYCLDDDNETEVQ
KDDTIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFSKQSMVRRHQFMGTQVIKIFS
AKDDEHAGVALSALIRALDELNMVAIVRYAYDRRSNPQVGAAFPCIKQDYECLMYVQLPF
MEDLRHFAFPSLANNKKFTPSDPQLAAVDSLIDSMMLVEGDDQKDMFKVHHIPNPAFQRH
FQCLHHRAVNPGTPLPPMEPWLKAALERPDVISERCQAPLEEIKRKFPLTEVEKKKALKT
SAQIFGKDSEEPDAKKAKGDEEEDEYNLADIAEGSVTSVGSVDPARDFRTLIRKKSLPFG
EVCQQLTRRIEQLLSNKNTHYYMKSITCIQAFREQSIKLGDASLYNGYLQSLKRSIPNRG
LEVFWDLLLQDAITLISKDEVEGSTVSKNEANQFLVTEEKKEEAAAPQVEDTGDVDDLLD
MM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgccaaatcagcgttggtgttgtgcatggatgttgggttctccatgtccaac
tctgccccgggcgaagagcctccctttgaacttgccaaaaaagtcatccagaagtttgtc
cagcgccaggtttttgcagagaccaaggatgaactggcgttagttctgtttggcacagac
tccaccaagaacccactggccaaggatgaccagtaccagaacatcactgtgcatcgtcac
ctgatggtgcctgattttgagcttctggatgaaatagagaatcagatccatccagagagt
cagcaggctgattggctggatgctcttgttgtgtgtatggatcttcttcagactgcaaca
aaggaaaagaagtgtgatcgtctcaacattgttttcttgactgacctgaacactgaggcc
agctcagagcagctggacgttattattaacaacctaaaaaaagctggcattaccctgcag
ttttttttgcctttccctgcgggggacgatgtggagggtggaggagatgcggaaggaaga
gaccctggtcagccaggcacgggcaaaggtctatccaaggaacagaagagtggcctagac
atggtgaaacacatcatgctaagcctggatgaggaggacggcctggaagaaatttactcc
tttagtaaagcaattgagcagctgtgcatgttcaagcgcatcgagaggagacctatggcc
tggccctgtcagctgaccatcggcagctgtctgcccatccgtattgttggatacaaagca
gtgacagaagagaaactgaagaaaacatggactacagttgatgctcaaactaaccagaaa
gacgacgtgaagagagagactgtctactgtctggatgatgacaatgagacagaggtgcag
aaggatgatactatccaaggttttcgctatggaagtgatattgttcccttctccaaagta
gatcaagaccagatgaaatacaaacatgatgggaagtgctttgctgttctcggcttctca
aaacagagcatggtacgacgccatcagttcatggggactcaagtcatcaagatattttct
gccaaggatgatgagcatgcaggagttgccctgtctgctctcatccgagctctagatgaa
ctcaacatggtggccattgtacgttacgcctatgaccggcgcagcaaccctcaagtagga
gcagccttcccttgcatcaagcaggactatgagtgtctgatgtacgtccagctgcccttc
atggaagacctcagacattttgcatttccttcacttgcaaacaacaaaaagttcactcca
tcagacccccagctggctgctgttgactctcttattgactccatgatgttggtggagggg
gatgatcaaaaggacatgttcaaggtccaccacattcccaaccctgccttccagaggcac
ttccagtgtctgcatcatcgggcagtaaaccctggcacccctcttccccccatggagcca
tggctgaaggctgctcttgagcgccctgatgtcatcagtgaacgttgccaggctccacta
gaggagataaagaggaagtttcctctgacagaagtggagaagaaaaaggctctcaagact
agtgctcagatttttggcaaagactccgaggagccagatgccaaaaaggcaaaaggagac
gaagaagaggacgagtataacctggctgacattgccgaaggctctgtgacttcggtggga
agcgtggatccagccagagacttccgtactctgataaggaagaagagtctgccatttgga
gaggtctgtcagcaactgactcgcaggatagagcagttgcttagcaacaagaacacacac
tactacatgaaaagcatcacctgtatccaggcttttagagagcagtccattaagctgggg
gatgccagtttgtacaatggctaccttcagtccctgaaaagaagcattccaaacagaggg
ctggaggttttctgggacctgcttcttcaagatgccatcactctgatcagtaaagacgag
gttgaaggaagcactgtatccaaaaacgaagctaatcagtttctggttactgaggagaag
aaagaagaggcagctgcaccacaagttgaagatactggagatgttgatgacttgctggac
atgatgtaa
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