Etheostoma spectabile (orangethroat darter): 116697724
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Entry
116697724 CDS
T08457
Symbol
aff3
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116697724 (aff3)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116697724 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
116697724
NCBI-ProteinID:
XP_032385027
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All DBs
Position
11:4894841..4912785
Genome browser
AA seq
1217 aa
AA seq
DB search
MPTVLGGKGELSIVCFLLRCAYSQVKRTPTNCAKNILEDMTQSWPSQQALGGDRAQRILY
NPKEAKLPTAQQRQNRGDVQLRMTRHPCVAPHKSMLADDLKLSSDDDDTQRVTHESTSWD
GHSLSAQRVHTHGRRVRHSSSDSSGSDSTAGSGSSSFHSRXSRSPDVLPDPASPTNTQPT
HSHNSKETDHPSAAQWQLDKWLKKSRNKSASSDQDPSQSIAGNLPSPHTQRAPSPARSWD
SNQEYSPSQSPIPSPHFNYSHNNSPLPSPGYSYCPSPSPFPSTCPSPSPSPRHNPIPSPV
PSVCPSPCGSLRASRSPSPISGEPPRRPSPSVPAPSRVRHYPDVRTTQPSLTTNPHRTKN
RITPLPYTNTKSKPTNSTHLQPTHQHRSKIRSTENQDQSKPKASALINSNQSHRHKSRPK
PNFHPSSKKLSEAPKAKHTSHIEQIQSSRSNHNSNHRPRPSFQSSLQHSPTTAKHLIPAS
RETNSDHSSHSQSTSKAATKSNTGLNSRSTPGLKHRAKSSEATAPNSVHVDLTKTTQKKP
HSKEQEVEHRGDHLTQAEGRKHERKQNRHQEKQPGKQERKEDRRLAEEQLLRRPWIQSSA
EEEEEEAEEEEGVIETQRRREETARGEKRRGREQQHRREWQTVQVKQRLPTNNEGRTKKG
GRSEEERELQQDPSPPPSRSPTPHRPSSXPSASPSSNSDSESEYQAPITKVPADSTSHKR
LPSRGQQGPGRPDASRPKVVHPRIPTSGNPSEGQQSERKQKLYTLVPFGRGEQATAPFQR
GLRNLVVQIDLCLLKRVPDSTTSSTVKKPSSSSAKDKQREAMKHLYVPETVTKDSKRKRK
LENSVSQSESKRSIPYANDLSGHTESSSHTADFVTETTHNGYLEEYLDSKRPLSPLSPLS
DSPESTKPPLKTKTSEQHHVHVHKNRDKNRDSAIKPKMEVECVKVSRQPQXPLESWGPAG
HRGTVPNNETPHHAEYYLHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGKAMEEGPL
EAKSPYTMYSETVDLIRYAMRLKSHSGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDHA
LKYSKVLLDYFKTSSKVPSTPPCWSDSGKGTGGPPSSLSPNAKHLGRGSHGGSAFPSVIS
IPQRIHQMAANHLNITNSVLYSYEYWEVADNLAQENKEFFNYLNTLSGPLTLHSSIAHAV
QYTRQALQWIRISAKLN
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggtggcaaaggggaactttccattgtctgttttctactcagatgc
gcatattctcaggtaaaaagaaccccaacaaactgtgccaaaaatattctggaggacatg
actcagtcctggccgtctcagcaagccttagggggtgaccgggcccaacgaattctctat
aaccctaaggaagcaaaactaccaactgcacagcaaaggcaaaatcggggggatgtacag
ctgcgaatgacccgtcacccttgcgtggcacctcacaaatcaatgcttgctgatgatctg
aagctgagcagtgatgatgatgacactcaaagggtaactcatgagtctacttcctgggat
ggacacagcctgtcagcacagcgagtgcacacacatggcaggcgggtgagacattccagt
tcagactcttcaggctcggactccactgctgggtcgggaagcagcagctttcactcccgg
nnaagccggagcccagacgttctcccagatcctgcatcgcctaccaacacgcagccaact
cacagccacaacagcaaggagactgatcacccctctgcggcccagtggcagttggataaa
tggctgaagaagtcccggaacaaatctgccagcagtgaccaggatccctcccagagcatt
gcaggaaaccttccctctccccacactcaaagagccccatctccagccaggtcgtgggac
agcaatcaggaatacagccctagccaaagccctattcccagcccacattttaattacagc
cacaacaacagccccttacctagccctggttatagctactgccctagccccagcccattc
cccagcacatgcccaagtcccagccctagcccaaggcacaatccgatccctagcccggtt
ccaagtgtatgccccagtccatgtgggagcctaagagcaagccgtagccccagccctata
tctggagaacctccaagaagacccagtcccagcgtacctgctccttccagggtccggcac
taccccgacgttcggacaacacaacctagcttaacaactaatccccacaggacaaaaaat
aggattacgccattgccttacaccaacaccaaaagtaagcctacaaacagtactcatctt
cagccaactcatcagcacaggtccaagatccgatccacagagaaccaagaccaaagcaaa
cccaaggcttctgctcttataaactctaaccagagtcacagacacaaatctagacctaaa
cctaacttccatccaagttctaaaaagctctctgaggctccaaaagccaaacacacatca
catatagagcaaatccagagtagcagatccaaccacaactccaaccacaggcccaggcct
tcatttcaatctagcttacaacatagccccacaacagctaagcacttaattcccgctagt
cgtgaaaccaactctgatcatagttctcattcccaatctacctctaaagctgctactaaa
tctaatactgggttgaactctagatcaacacccggccttaaacatagggccaagtcttca
gaggctacagcgccaaactctgtgcatgtcgaccttacaaaaacaacacaaaagaaaccc
cattccaaggaacaggaggtggaacacagaggtgatcatttgacccaagcagaggggaga
aaacacgagagaaaacagaatagacatcaggaaaaacaaccaggtaaacaggagagaaag
gaagacaggaggctggcggaggagcagctactgagacgtccctggatccagagttcggca
gaagaagaggaggaggaggcagaggaggaggagggagtgatagagacgcagaggagaaga
gaggagactgcaagaggggaaaagaggagggggagggagcagcaacatagacgtgaatgg
caaacagtccaggtcaaacagagactgcctaccaataacgagggaaggacaaaaaaggga
gggagaagtgaggaggagagagagttacaacaagatccatcacctcctccgtcacgttcc
ccaactcctcacagaccatcctccntaccctctgcctcgccgtcttcaaattcagattca
gaatcggaatatcaggctccgataactaaagttccagcagactccacttctcacaagaga
ctccccagtagagggcaacaaggcccaggcaggcctgacgccagcaggccgaaggtggtg
caccccagaataccaacctcaggtaatccaagtgaagggcagcagagtgagaggaagcaa
aaactctacaccctggtcccgttcgggcgtggtgaacaagctacagcgcctttccagcga
gggcttagaaatctggtggtgcagatagacctctgtcttctcaaaagggtcccggacagc
actactagttctactgttaaaaaaccctcttcttcctcagccaaggataagcaaagagaa
gctatgaaacacctgtacgtccctgagactgtgacgaaagacagtaaaaggaaacgcaag
ttggagaacagtgtgtcacaaagtgaaagcaagaggagtattccgtatgcaaatgacctc
tcaggccatacagagtcttcatctcacacagctgactttgtcaccgagaccacacacaac
gggtacttggaggagtacttggacagcaagaggccgttgtctcccctgtctccactgtcc
gacagcccggagtccaccaagcctcccctcaaaacaaagacttcagagcagcatcacgtc
catgtccacaaaaacagagacaagaatagagattcagctataaagcccaagatggaggtg
gaatgtgtcaaagtgtcaagacagccccaanccccacttgagtcctggggccctgcagga
cacagggggaccgtgccaaacaatgaaactccgcaccatgctgagtactacttacatgaa
gctaaaaggatgaagcaccgtgccgacgcaatggtggacaaactgggaaaggctgtcaat
tacgttgatgctgctctctccttcatggaatgcgggaaagcaatggaggaagggccacta
gaggcaaagtccccttataccatgtactcagagacagtggatcttattaggtacgcaatg
aggctgaagagccactctggccctggggcaagacaggaagacaaacagctggcggttctg
tgtttccggtgccttgccctcctttactggcaaatgtttcgtttaaagaaggaccatgca
ctgaaatactccaaagttctgctggactactttaagacttcttccaaagtgccttctaca
ccgccctgttggagtgactctgggaagggtacaggaggacccccttcttcactttcaccc
aacgccaaacaccttggacggggttcacatgggggcagcgcgttcccctctgtcataagc
attccccaacgtatccaccagatggcagcaaatcatctgaacattaccaacagtgtcctg
tacagctatgagtactgggaggtggcagacaacctcgcacaagagaataaagagttcttc
aactacttaaatacgttgtctgggccgttgactcttcacagtagcattgctcacgctgtc
cagtacaccagacaggctcttcagtggatacgcattagtgccaaacttaactaa
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