Etheostoma spectabile (orangethroat darter): 116697790
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Entry
116697790 CDS
T08457
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04060
Cytokine-cytokine receptor interaction
esp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116697790 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116697790 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
esp04052
]
116697790 (tnfsf13b)
04090 CD molecules [BR:
esp04090
]
116697790 (tnfsf13b)
Cytokines and neuropeptides [BR:
esp04052
]
Cytokines
Tumor necrosis fators
116697790 (tnfsf13b)
CD molecules [BR:
esp04090
]
Proteins
116697790 (tnfsf13b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
116697790
NCBI-ProteinID:
XP_032385161
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All DBs
Position
11:complement(6142439..6146024)
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AA seq
260 aa
AA seq
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MGPAMACVEPGIGKRTGEGRLSWPVFLLTLAAVTSSSLSALSLYQLVALRAEVEGLKSEV
CRKREEGREAKHAGQTENINWRSSQESLHQPGPQKTFTLIRRRRLVSGSEKIVSQPCLQL
LANNSRKTFRKEYNAEPHTGIPWQAGLSRGSALEKDGDSMLVREEGFFFVYSQVYYMDST
FAMGHVVIRRKRNVVGDEPQYVVLFRCIQNMNPVHPYNTCYTGGIVKLEVGDHLELLIPR
STANVSLYGDATFMGAVKLA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgggccccgcgatggcttgtgtggagccagggattggaaaaaggacaggtgaagggagg
ctgtcctggccagttttcctgctgacgctggctgctgtcacctcctcttctctttcagct
ttgtccttgtaccaactggtggccctcagagctgaggtagagggtctcaaatcagaggtt
tgtcgcaagagagaagaggggcgagaggccaagcatgcaggccagactgagaatatcaat
tggagaagcagccaagagtccctgcaccaacctgggcctcaaaaaactttcaccctgata
cgtaggagaagattggtctccggatcagagaaaatagtttctcagccttgcctgcagttg
ctggcaaacaatagcaggaaaaccttccggaaagaatataatgcagagccacacacaggt
atcccctggcaggcagggctgagcagaggctctgccctggagaaagacggagacagcatg
ttagtcagagaggagggcttcttctttgtgtacagtcaggtctactacatggacagcacc
tttgcaatgggtcacgtggtgatccggaggaagaggaatgtggtgggagacgagcctcag
tatgtggtcttgttccgctgcatccagaatatgaaccccgttcacccttacaacacctgc
tacacaggaggtattgtgaagctggaggttggggaccacttggagctgctgatccctcgt
tccacagccaacgtgtccctttatggagatgccacctttatgggtgctgtaaaactggct
tag
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