Etheostoma spectabile (orangethroat darter): 116697830
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Entry
116697830 CDS
T08457
Symbol
clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116697830 (clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
esp04812
]
116697830 (clasp1)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
116697830 (clasp1)
Cytoskeleton proteins [BR:
esp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
116697830 (clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Cnd1
Sec7-like_HUS
MMS19_C
HEAT_DAAF5
ParcG
TAN
Paxt-1_C
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
116697830
NCBI-ProteinID:
XP_032385194
LinkDB
All DBs
Position
11:20438268..20523798
Genome browser
AA seq
1643 aa
AA seq
DB search
MEPSMENCLSQVLQKDMGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWVN
SSNFKVALLGLDLLSALVTRLQERFRTHVGTVLPSLIDRLGDSKDQVREQDQTVLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLSTYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMSCLVEIYKHVGERVRMDLSKKGLPQSRLNVIFNKFDEVQRSGNMMVSSGSDK
NFEDEDSVDGGRSSSSSSSKAPPSGRKPVMSSVRRPSSATTAKATVKEAAAGALDEEDFI
KAFEDVPSVQIYSNRELEDQLTKIREVLSDDKHDWEHRVLALKKVRSLILAGASEYEGFP
QQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSVLGTKFDHGAESIMPTLLNLVPNSAK
VIATSGMAAIRLILRRTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLERH
VAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLKSS
DSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSMTRSKLVSTRVPSGSLQRSRSDIDVNA
ASSAKSRLSTVPASSPFGSAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGASPSVV
DSRGRSRAKVVSQSQRSRSANPINAGSRSSSPGKLLGHSSYGRIPRSTVSASNTTADKRS
RIPRSQGCSRETSPSRLGLARLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTSRESS
RDTSPARGFTPLASRRHSRSTSALSTADPHSQSDRYGLIHQARISASVNAMRVLDTGTEV
EAAVADALLLGDSRNKRKPMRRRYESPGMYSDDDANSDASSACSERSYGSRNGGIPHYLR
QTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKR
VFSMFLETLVDFVTVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPF
DQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTT
EPKSSDVRKTLHNWVSEELAGWSSTAALLSAEGSQEERCKQAAQVVLIALFELNTPEFTM
LLGALPKTFQDGATKLLHNHLKNSSNTGSSVGSPSNTIGRTPTRHTPSRTSPLTSPTNCS
HGGLSPSRLWGWGVDGLSKHPPAPPPPPPPHSTPAVPSLRVLRRAYSPSMMEYDTENMNS
EEIYSSLRGVTEAIQSFSYRSQEDLNEPIRQEGKRDDAAGREGVASSPGSDVRLGLDMVE
GGRTALDNKTSLLNTPSPRSFSGPRGREFAPYGYGETICTYDKSALKEAVFDDDVEQFRD
CRRQESGENKMTLPKVFAPAGGQDHSNLVPDLLKELSNHNERSEERKCALVELLKITRED
SLAVWNEHFKTILLLLLETLGDKDHTIRALALRLLKEILRNQPARFKNYAELTIMKTLEA
HKDTHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIAK
DSLLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLN
LYIKRAQTTNSNSSSSSDVSSHS
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagcatggagaactgcctgtcccaggtcctgcagaaggacatgggccgccgg
ctgcaggtggggcaggagatcattgattacattttggacaaggagaagtcccacgacctg
gagcaggatcagacagcgctggacaagatggtggacggcattgccagctcctgggtcaac
tccagcaacttcaaggtggctctgcttggcctggacctgctatctgccttagtgacaagg
ttacaggagcgattcaggacccacgtgggaacagttctgcccagccttattgatcgattg
ggggattcaaaagaccaagtgcgagaacaagaccaaacagtgctgctaaagatcatggaa
caagctgccagcccgcagtatgtgtgggaccgaatgctgggaggcttcaaacataagaac
aacaggaccagagaaggagtgtgcctttgcctcatcgccacgctgagcacatacggagct
caaggcctgaccctcagtaaaattgttccccacatatgtaacctcttgggggaccccaca
agtcaggtgcgtgacggggctatgagctgcttggtggagatctacaaacacgtgggtgag
agggtgaggatggatctcagcaaaaagggcctgccacagtcacggttgaatgtaatcttc
aacaaatttgatgaagtccaaagatccgggaacatgatggtatcctccggttcagataag
aactttgaggatgaagactctgtggatggaggccggtcctcctcctcttcatcatccaaa
gcaccccccagtggcaggaagcctgtaatgagctctgttagaagacccagctcagccacc
acggccaaggccacagtgaaagaagccgctgccggtgctctagatgaagaggatttcatt
aaagcctttgaagacgtgccatcagtccagatctactctaacagagagctagaggaccag
ctgaccaagatcagagaagtgctgtctgatgacaaacatgactgggagcaccgagtgttg
gcgctgaagaaggtgcgttccctgatcctggccggggcatccgagtacgagggtttccct
cagcagctgcgtctcctggaggctcccctcaaactgtccgctaaagacctgcgctcacag
gtggtccgcgaggcctgcatcacactgggacatttgtcatcagtactgggtactaagttt
gaccacggagcggagagcatcatgcccacactgctgaaccttgtgcccaacagtgccaaa
gtcattgccacgtctggaatggcagccatccgcctcatcctcaggcgcacacactaccca
cgtctcatccccatcatcacgagtaactgcacctccaaatcagtagcagtccgacgacgc
tgttatgagttcctagacctcatgttacaagagtggcacactaatacactggaaaggcac
gtggctgttctgactgagaccatcaagaaaggcatacacgatgctgactctgaggccaga
tccatcgctagaaagtgctattggggtttccatggtcactacagccgggaggcagagcac
ctgttccaggcgctggagtccacctatcagaaggccctccagtctcacctgaagagctcg
gacagcatcgtgtctctgccccagtcggaccgctcctcctcctcttcccaggagagtctg
aaccggcctttgtctgtgaagagtgtcattggagggagcatgacaaggagtaagctggtg
agcaccagggtgccatcgggttctctacagcgttcccgtagtgacatcgatgtaaacgcc
gcctccagcgccaagtcccgtctgtccaccgttcccgcatcctcaccgttcggctccgca
gccgccctgcccccaggctcctacgcctcattagatggcactcccggtaaaagtgatggt
cgtgttcgaaccaggagacaaagctcgggcagcgtaggcggagccagtccctcagtggtg
gacagcagggggcgcagccgagccaaagttgtctctcagtcccagcgatccagatcagcc
aatcccatcaatgctggcagccgctccagctccccaggcaagctgcttggccacagcagc
tacggcaggatccctcgatccacggtgtcggcctccaacacgacagcagacaagcgcagc
aggatcccccgcagccagggctgcagccgcgagaccagccccagccgactgggcctcgcc
agactgtgtggtaaagctcttcttcccgctgctcttccctaccgcacgctagcccggagc
cgcattccccgtcccagcatgagtcagggttgcagtcgcgacaccagtcgcgagagcagc
cgcgacaccagccccgctcggggcttcacccctcttgcctcccgacgtcactcccgttca
accagtgctctctccacagccgacccacacagccagtcagaccgatacggtttgattcac
caagcaaggatctctgcatcagtcaacgccatgagggtccttgacactggcacagaggtg
gaggcagccgttgccgatgctctgctattaggagactccaggaataagagaaagccaatg
aggcggaggtatgaatccccggggatgtactctgacgacgatgccaacagtgacgcgtcc
agtgcctgttcggagcgctcgtatggctccaggaacggaggcatcccccactacctgcgg
cagacggaggatgtggccgaggtcctgaaccactgtgccagctccaactggtcagagagg
aaggagggcctgctgggcctgcagaatctcctcaagagccaaagaatactgagccgagtg
gagctaaagagactttgtgagatcttcacaaggatgtttgcagatccacacagcaagagg
gtgttcagcatgttcctggagactcttgtggactttgtcacagtacacagggaggacctg
caggactggctctttgtcctgctcactcagctgctgaagaagatgggggctgacctgctt
ggctcggtccaggccaaagtccagaaggccttggatatcacaagagagtccttcccgttt
gaccaacagttcaacattctgatgaggttcatcgttgatcagactcagacacctaatctg
aaggttaaggtggccattttgaagtacattgagtccctggctcggcagatggacccgacg
gactttgtcaactccagcgagacacgcctggctgtatctcgcatcatcacctggaccact
gaacccaaaagttctgatgtcaggaagacccttcataactgggtgagcgaggagctagct
ggctggtccagtactgcagcattactgtccgctgagggcagccaggaagaaaggtgtaag
caggcggcccaggtggtgctgatcgctctgtttgagctcaacaccccagagttcaccatg
ctgctgggagcgctccccaaaaccttccaggatggagccaccaaactgctgcataaccac
ttgaagaactccagcaatacgggaagcagtgtgggctctccgagcaacactattggccgg
acgccgacccgtcacacccccagcagaaccagcccccttacctcccccacaaactgttcc
cacggaggactgtcaccaagtcggttatggggttggggtgtcgacggactgtcaaagcat
ccccctgcccctcctcctcctcctccgccccactccacccctgccgtcccctccctaagg
gtcctccgcagagcatattcacccagcatgatggagtatgacactgagaacatgaactcg
gaagagatctacagctcgctgcgcggtgtcaccgaggccatccagagcttcagctaccgg
agccaggaggacctgaatgagccaatcagacaggagggcaagagggacgatgccgcaggt
agagagggtgtagcgtcctctcctggctctgatgtccgccttggcttagacatggtggaa
gggggtcgcaccgccttggacaacaagacttccctcctcaacacgccatctccccgctcc
ttctctgggccgcggggccgcgagtttgctccttatggctacggagaaaccatctgcacg
tatgacaagagcgccctgaaggaggccgtgtttgacgatgacgtggagcagttccgcgac
tgccgacggcaggaaagtggtgaaaacaagatgacgctccccaaggtctttgctcctgca
ggcggtcaggaccactctaacctggtacccgacctgctgaaggagctgtccaatcacaac
gagcgttcggaggagcgtaagtgcgccctggtggaactgctgaagatcacacgagaagac
agcctggctgtgtggaatgaacactttaaaaccattctgctcctgctgctggagacactg
ggtgataaagatcacaccatccgagccctggccctgcgtttgctgaaagaaattctgagg
aaccagccggcccgcttcaaaaactatgctgagctaaccatcatgaagaccctggaggct
cacaaagacactcacaaggaggttgtgcgtgcggccgaggaggcggcatccaccctggcc
ggctccatccacccggagcagtgcatcaaggtgctgtgccccattgtgcagacagccgac
taccccatcaacctggctgccatcaagatgcaaaccaaagtcattgaacgcatcgccaag
gactccttactgcagctgctgcccgacatcatccctggactcctgcagggctatgataac
acagagagcagcgttcgcaaggccagtgtgttttgtctggtggccatctactctgtgatt
ggcgaggatctcaaaccccacctggcacagctcacggggagcaagatgaagttactgaac
ctgtacatcaagcgagcccagacgaccaacagcaacagcagcagttcctcggacgtctcc
tctcacagctaa
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integrated database retrieval system
