Etheostoma spectabile (orangethroat darter): 116697832
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Entry
116697832 CDS
T08457
Symbol
topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116697832 (topors)
03036 Chromosome and associated proteins [BR:
esp03036
]
116697832 (topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
esp03037
]
116697832 (topors)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116697832 (topors)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116697832 (topors)
UBL E3 ligases
116697832 (topors)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116697832 (topors)
Cilium and associated proteins [BR:
esp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116697832 (topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
116697832
NCBI-ProteinID:
XP_032385216
LinkDB
All DBs
Position
2:complement(11524577..11528660)
Genome browser
AA seq
780 aa
AA seq
DB search
MSAIKIALQQSQKKGRRKTSEAMSAEVSPDSKCPICLDIFNNISYLDICLHKFCFRCIQE
WSKNKAECPLCKQPFNSIYHSIKSDHEFKKYDLQPVDNGSFGTFGGVRFRYRTTLTGVHR
QMRGRTSPPPDNGVMFEASANPPQQPQDRYIRRMMKRLAAKRRAASEGRAVNSVREQEMV
NFRRELYRRGVKIRSVRDGGRSRDTSAEFFRRNPACLHRLIPWLKRELIVLYGAHGSLVN
IVQHIIMSRITRYDMEDGAIQEELRPFLQGRTEHFLHEFISFAKSPFNMEAYDQHASYDC
PAPSSNEDSSSNSSVIAISEDEEDSVELDPPGDSTSNLSHSAWDDETPGPSYSTTAEQSR
AECLSVLNLDSDSDSSLEEETQGFGASPQQITPHNQTDVARGGVNDEECLSNDSDDCVII
SFVKPTAERTPELVQLSSDSDESASEDIKAVPLLPQHIRFSSLSPIASQSSDPSGAGQSE
SAETDNYHQLYSKNRCSSSTSSRHKTSSKLDRKDTGRRFDSNDRSRERHLSKDRDHRRKR
RSRSGERRRSSRSPVISPSSTQSRERGSSYSSSKDYSKCDRNYKRRDRDYSYQSNRHYSQ
ERNNSGINYTEKRSYYYSIRNYSDRHSGSRSHSRDSRRRDRGHSRSRTCSNSRSPSTKST
SHNNKPGGKRKYKTRHLEEASKNTLSLSNANGDSPVLSTKHKKKSKEKHRKKSRDRSRKT
SRSLSVELVNEENSNERSKHHHKKKKKHKKKSKRHKSNERTGKHLPTVITIDSDSDSFCE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatcaagattgcccttcagcagagccagaaaaaaggcagaaggaaaacttct
gaagcaatgtctgcagaggtgtccccagactcgaagtgtcccatctgtttggacatattt
aacaacatttcttacctggacatctgcctacacaagttctgtttccgctgtattcaggag
tggtcgaagaacaaagctgagtgccctctatgcaaacagccgtttaattcaatctatcac
agtataaaatctgatcacgagtttaagaagtatgatctgcagccggtggataatggctct
ttcgggacttttggcggagtgcggtttagataccgcacaactcttactggagtccatcga
cagatgcggggaaggacctctccacctcccgacaatggagtaatgtttgaagcctcagca
aaccccccacaacagccgcaggaccgctacatccggcggatgatgaagaggttggcagcc
aagaggagagctgcgagtgaaggcagggcagtgaacagtgtcagagagcaggaaatggtc
aactttaggagggaactgtaccggcggggggtgaagattcggagtgtccgggatggaggc
cgctcccgcgacacctcagctgagttcttccgaagaaatcctgcctgcctacatagactg
atcccctggctaaaaagagaactcattgtgttatatggggcccatggctctttggtcaac
atagttcaacacatcatcatgtcacgcattacacgttatgatatggaggatggagctatt
caggaagagctcaggccgttcctccaggggcgcacagagcactttttgcatgagttcatc
agctttgcaaagtcccccttcaatatggaggcctatgaccagcatgcttcctacgactgc
cccgccccttcctcaaatgaagacagcagttccaattcatctgtaatcgctatctcagag
gatgaggaagactcagtggagttggaccccccaggtgactccacgtctaatttgagccat
tctgcatgggatgatgagacgcctgggccatcatattctacaacagcggagcagagcagg
gccgagtgtctgtcagtcctcaacttagactcggattcagacagcagtttagaggaggag
acacaggggtttggggcctctccacagcaaattactcctcataaccaaacagacgtggca
cgcggtggagttaacgatgaagagtgtctgtctaatgacagcgatgactgtgtcattata
agttttgttaagccaactgcagagcggactcctgaactggttcagctctcctctgactct
gatgagtctgccagtgaagatattaaagcagtgcctcttctacctcaacacatccgcttc
tccagtcttagtcccatagcttcacagagtagtgatccaagtggtgctggacagtcagaa
agtgccgaaacagacaactatcatcaattgtattcaaaaaatagatgtagctcttcaaca
tctagcagacacaagacatccagtaagttagacagaaaagacacgggtagaagatttgac
agtaatgatagatctagggagaggcacttgtctaaggacagagaccataggagaaaaagg
aggtcaagaagtggagagcgcaggcgctccagcaggagcccagtgatctcccccagcagc
acgcagtccagagaaagaggttcttcttactccagtagcaaagactactcaaaatgtgac
cgtaattataaaaggagagaccgtgattacagctatcagtcaaacaggcattatagccaa
gagagaaataatagtgggataaattacacagagaagcgatcctactattacagtattcgc
aactactcagatcggcactctggctccaggagccacagcagagattcacggagacgggac
agggggcattctcgttctaggacttgttccaacagtcggtccccttcaacaaaaagtaca
tctcacaacaataagcctggtggaaagaggaaatacaaaacaagacatttggaagaagca
tccaaaaacacactttccctctcaaatgcaaacggtgactcccccgtgttgtcaacaaaa
cataagaaaaagagcaaagagaaacatcgtaaaaaatccagagacaggtcaagaaagact
agcaggagcctcagcgtggagctcgtcaatgaggaaaactctaatgagcggagcaagcat
caccataagaagaagaagaaacataagaagaaaagtaaaaggcacaagagtaatgagcgc
acagggaagcacttacccactgtcattaccattgatagtgacagtgattctttttgcgag
tga
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